| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 10 (0.020) | 518 (0.920) +GCC |
137/268 | 0.1 | 98.2% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 10 (0.020) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 551 total aligned reads displayed.
CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CCATGTT‑‑‑CACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCGG > NZ_CP025268/3864312‑3864584 | cggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccac < 1:7956938‑M2/3‑1 (MQ=255)cggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccac < 1:1003080‑M2/3‑1 (MQ=255)cggaaaaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccac < 2:4942777‑M2/3‑1 (MQ=255) aaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccacac < 2:217427‑M2/8‑1 (MQ=255) aaccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccacac < 1:2818823‑M2/8‑1 (MQ=255) accacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccacacc > 1:2997364‑M2/132‑140 (MQ=255) ccacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccacacca < 2:8765563‑M2/10‑1 (MQ=255) cacgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCaa < 2:5065281‑M2/11‑1 (MQ=255) acgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCaa‑‑a < 2:9681977‑M2/12‑1 (MQ=255) cgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑ag > 2:7594057‑M2/128‑140 (MQ=255) cgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑ag > 2:4323233‑M2/128‑140 (MQ=255) cgaagtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑ag > 1:4571166‑M2/128‑140 (MQ=255) aagtacagcagggtaaagcacaacccaatggcgatttgggtaagcatcatatccgcgtggtttctgaacatcgtgatccagttttgcggtaaaacctagtcaatcagacctccgaccatgttgcaCACCACACCAA‑‑agag < 2:456329‑M2/15‑1 (MQ=255) agtacagcagggtaaagcacaacccattggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑Agaga < 2:2819957‑M2/16‑1 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑Agaga < 1:7016917‑M2/16‑1 (MQ=255) agtacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑Agaga > 1:9311481‑M2/125‑140 (MQ=255) tacagcagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtacaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATa > 1:7264217‑M2/123‑140 (MQ=255) cagggtaaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTa > 2:5395777‑M2/118‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagagctccgcccatgttgccCACCACACGAC‑‑CGAGATACAGTACGGTc > 1:6262125‑M2/113‑140 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcccaccacacca < 2:1406446‑M2/10‑1 (MQ=255) taaagcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTc > 1:9150371‑M2/113‑140 (MQ=255) caaaGCACAACCCACACGCGAAATGGCTCCCCATCATACCCGCGTGGTTGCTGAACATCGCGAGCCAGATTTGCCTTAAAACCTAGTCAATCAGACCTCCGCCCATCTTGCCCACCACACCAA‑‑AGAGATACATTACGGTc < 2:6861492/139‑1 (MQ=255) agcacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCCA‑‑AGAGATACATTACGGTCGAc > 2:2499728‑M2/110‑140 (MQ=255) cacaacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACAt > 1:8986612‑M2/108‑140 (MQ=255) aacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGa > 1:516227‑M2/105‑140 (MQ=255) aacccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGa > 2:1219443‑M2/105‑140 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg > 2:161955‑M2/104‑140 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 2:5629053‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 1:1939148‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 1:5524933‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 2:7061587‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 2:7747572‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 1:5256031‑M2/37‑1 (MQ=255) acccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAg < 2:7881312‑M2/37‑1 (MQ=255) cccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatcccgttttgcggtccatcctagtcaatcagacctccgcccatgttgccCACCACACCCA‑‑AGAGATACAATACGGTCGACAGTGAgg > 2:8025526‑M2/103‑140 (MQ=255) cccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcgggaacacctagtcaatcagacctccgcccatgttgccCCCCCCACCAA‑‑AGAGATACATTACGGGCGACATTGAgg > 2:357313‑M2/103‑140 (MQ=255) ccaatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgtgatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgcgCTCCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgc < 2:3195968‑M2/39‑1 (MQ=255) caatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgcc > 1:2549240‑M2/101‑140 (MQ=255) aatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgccg > 1:7510268‑M2/100‑140 (MQ=255) aatggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgccg < 2:1077303‑M2/41‑1 (MQ=255) atggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgccgc > 2:5987937‑M2/99‑140 (MQ=255) tggcgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGgccgcc > 1:2753559‑M2/98‑140 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacctcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 2:3020655‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:6585031‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:8752240‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:8324741‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:4392‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 1:5871988‑M2/46‑1 (MQ=255) cgatttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGc < 2:56960‑M2/46‑1 (MQ=255) atttgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCAc > 2:9428241‑M2/93‑140 (MQ=255) atatgggtcagcatcatatccgcgtggttgctgaacatcgggatccagttatgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCAc > 1:3824320‑M2/93‑140 (MQ=255) ttttgctcagcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctactcaatcagacctccgcccatgtttccCACCACACCAA‑‑AGAGATACAATACGGTCGACATTGAGGCCGCCAGCACg < 2:4684261‑M2/49‑1 (MQ=255) cagcatcctatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTa < 2:9766006‑M2/56‑1 (MQ=255) gcatcatatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTAcc < 1:8163462‑M2/58‑1 (MQ=255) tatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAAAGAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCaa > 1:5483240‑M2/77‑140 (MQ=255) tatccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAAc > 1:4748031‑M2/77‑140 (MQ=255) tccgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAg > 1:9779851‑M2/75‑140 (MQ=255) cgcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCa < 1:3971423‑M2/68‑1 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 1:1774662‑M2/72‑140 (MQ=255) gcgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCaa > 1:6018370‑M2/72‑140 (MQ=255) cgtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAc > 2:6115189‑M2/71‑140 (MQ=255) gtggttgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACg < 1:7104693‑M2/71‑1 (MQ=255) tgctgaacatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGTTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGaa < 2:4804760‑M2/76‑1 (MQ=255) acatcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAAc < 1:678299‑M2/82‑1 (MQ=255) catcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACa > 2:8975209‑M2/58‑140 (MQ=255) tcgggatccagttttgcggtaaaacctagtcaatcatacctcctcccatgttgccCACCACACCAA‑‑ATAGATACATTACGTTCTACATTGAGGCCGCCAGCAAGGCGTGTACCGCAAACAGCAACGGTGAAATGAACagt > 2:8170038‑M2/56‑139 (MQ=255) tcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAgg < 1:7389775‑M2/85‑1 (MQ=255) tcgggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAgg > 2:9178437‑M2/56‑140 (MQ=255) ggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAg > 2:3727120‑M2/53‑140 (MQ=255) ggatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAg > 2:1734730‑M2/53‑140 (MQ=255) gatccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAgg > 1:7653644‑M2/52‑140 (MQ=255) tccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTa < 2:6284137‑M2/91‑1 (MQ=255) tccagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTa > 1:6469371‑M2/50‑140 (MQ=255) cagttttgcggtaaaacctagtcaatcagacctccgcccatgttgccCCCCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGgtaca > 2:7354778‑M2/48‑138 (MQ=255) tttgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTcc < 2:3399394‑M2/97‑1 (MQ=255) tgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAg > 2:3517084‑M2/42‑140 (MQ=255) tgcggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAg < 1:1351750‑M2/99‑1 (MQ=255) ggtaaaacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCgg < 1:1219443‑M2/102‑1 (MQ=255) taaaaccgagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGtt < 2:8278308‑M2/104‑1 (MQ=255) aacctagtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCgg < 2:3104102‑M2/107‑1 (MQ=255) agtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAtt > 1:8577554‑M2/29‑140 (MQ=255) gtcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTc > 2:8589730‑M2/28‑140 (MQ=255) tcaatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTcc > 1:3331457‑M2/27‑140 (MQ=255) caatcagacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTccc < 2:1991968‑M2/115‑1 (MQ=255) agacctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAg < 1:6092471‑M2/120‑1 (MQ=255) acctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCa < 1:806290‑M2/122‑1 (MQ=255) acctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCa > 2:3991446‑M2/19‑140 (MQ=255) acctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCa < 2:4144346‑M2/122‑1 (MQ=255) cctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAt > 1:3636095‑M2/18‑140 (MQ=255) cctccgcccatggtgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGcag < 1:1448122‑M2/123‑2 (MQ=255) ctccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATg < 1:2340227‑M2/124‑1 (MQ=255) ccgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGc > 1:4144601‑M2/15‑140 (MQ=255) cgcccatgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCg > 1:8477011‑M2/14‑140 (MQ=255) atgttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTaa > 1:9515164‑M2/9‑140 (MQ=255) gttgccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAgg < 2:1841037‑M2/134‑1 (MQ=255) gttgccCACCACACCAA‑‑AGAGATACACTAAGTACGACATGGAGGCCGCCAGCACGGCGTGTACCGCCAACAGCAACGGTGAAATGAACAGGAAGCTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAGGGCGGTGAAgg < 2:3880878‑M2/134‑1 (MQ=255) gccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg > 1:3182736‑M2/4‑140 (MQ=255) gccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg > 1:6634029‑M2/4‑140 (MQ=255) gccCACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTg < 2:394155‑M2/137‑1 (MQ=255) caccacaccaA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTAAGGTTGCgg > 1:849828/1‑140 (MQ=255) | CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑CCATGTT‑‑‑CACCACACCAA‑‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCGG > NZ_CP025268/3864312‑3864584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |