| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 780371 | 404 (0.700) | 27 (0.070) | 21/196 | 8.0 | 10.5% | intergenic (+100/‑47) | CXP41_RS04105/CXP41_RS04110 | tRNA‑Lys/tRNA‑Lys |
| ? | NZ_CP025268 | 780860 = | 170 (0.410) | intergenic (+3/‑274) | CXP41_RS04120/nadA | RtT sRNA/quinolinate synthase NadA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 340 total aligned reads displayed.
GCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCA > NZ_CP025268/780725‑780998 | ttttGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAg < 2:8778151/140‑1 (MQ=32) gtttGCTATCTGCGATACTCAACGATTCGTCCCTGCATCTGTTTTGAGTTGAGCGCAGCGATAAAACGGAGCCGCTCGCGGCGACGGCCCGACGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAg < 2:1401621/139‑1 (MQ=11) acGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTAtt < 2:1234133/139‑1 (MQ=11) gcagcaGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATc > 1:5909927/1‑140 (MQ=37) gcagcaGGGTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATc > 2:3217244/1‑140 (MQ=37) cagcagGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATcc > 1:2555077/1‑140 (MQ=38) agcagGTTTGAGTTGAGCGCAGCGAAACTACTGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCt < 2:9750023/140‑1 (MQ=255) tgagttgagCGCCGCCAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCa < 1:4231594/140‑1 (MQ=255) tgagttgagCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCa < 2:4488766/140‑1 (MQ=255) agttgagCGCAGCTAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACt < 1:4709241/140‑1 (MQ=255) agCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTa < 2:1743321/140‑1 (MQ=255) agCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTa > 2:6957847/1‑140 (MQ=255) gcgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa > 1:5123889/1‑140 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaaa < 2:949569/140‑1 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaaa > 1:7194829/1‑140 (MQ=255) gCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg < 1:5763021/140‑1 (MQ=255) cGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtga > 1:3711477/1‑140 (MQ=255) acaacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGAc < 2:2257889/140‑1 (MQ=255) ctgAGCCTGTCGCGGCGACGTCCAGTCGGTCGCGCGCAGGGTGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCg < 2:1883131/138‑1 (MQ=18) gtgCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc < 1:1068146/138‑1 (MQ=255) gAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc < 2:7469020/140‑1 (MQ=255) gAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc < 1:711274/140‑1 (MQ=255) gAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc > 1:8860032/1‑140 (MQ=255) ccGCTCGCGGCGCCGTCCCGACGCGCGAGCGAAGCTAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCaga < 2:8576635/140‑1 (MQ=21) ccGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCaga > 2:879836/1‑140 (MQ=255) gccagcaaCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 2:5945252/133‑1 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 2:1307144/140‑1 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa > 1:9410478/1‑140 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 2:7088653/140‑1 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 1:5709809/140‑1 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTATTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 2:489663/140‑1 (MQ=255) gcggcgACGGCCCGAAGGGCGAGCGAAGCTAGTAATCCTGCAAGACCCACCTATTTAAAAAAAGCGCCCTAAATGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa < 2:1689200/140‑1 (MQ=21) gcggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTAc < 1:4589864/140‑1 (MQ=255) cggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACt > 1:5243903/1‑140 (MQ=255) ggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACtg > 1:6962020/1‑140 (MQ=255) gcgACGTCACGAATGGCGAGCGCAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACtgt < 1:1840011/140‑1 (MQ=255) gACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgc < 2:1099065/140‑1 (MQ=255) cGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTa > 2:4171362/1‑132 (MQ=255) gggccGATGGGCGAGCGATGCGTGTCTTCCTGCACGACCCACCAAGGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCTGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag < 1:156263/137‑1 (MQ=25) ggCCCGTAGGGCGAGCGAAGCTAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag < 1:9026788/140‑1 (MQ=255) ggCCCGCAGGGCGAGCGACGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag < 1:3235224/140‑1 (MQ=255) ggCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGATTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag < 1:265135/140‑1 (MQ=255) ccGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCAAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaagcaa < 1:2210720/140‑1 (MQ=255) gagcgaAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTNTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTc > 1:6319512/1‑140 (MQ=255) agcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc < 1:4905372/110‑1 (MQ=255) agcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCg > 1:853036/1‑140 (MQ=255) agcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCg < 1:6480998/140‑1 (MQ=255) agcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCg > 1:1289506/1‑140 (MQ=255) agcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGGCAGAGCTTACGGTGCAAGCAACTCTATGTCg < 1:98962/140‑1 (MQ=255) gcgcagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCgg < 2:5157586/140‑1 (MQ=255) gcgaagcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCgg < 1:6856537/140‑1 (MQ=255) gcgaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGaa < 2:826704/140‑1 (MQ=255) gaGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTACAGGCGCTATTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAAtt < 1:7856347/140‑1 (MQ=255) tCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAgg > 1:1103899/1‑140 (MQ=255) ccTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTa > 1:8236940/1‑140 (MQ=255) ccTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTa < 1:2294603/140‑1 (MQ=255) cACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAAt > 1:8660077/1‑140 (MQ=255) cACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAAt > 2:9689947/1‑140 (MQ=255) aCGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATg > 2:6327754/1‑140 (MQ=255) cGACCCACCAATGT‑AAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGa > 2:5764148/1‑140 (MQ=255) gACCCACCACTGT‑AACAAAGCGCCCGAAAGGCGCATTTTTGCTATTCAGGCCTCCCACATGTCACTATGGACCCCTGATGACATCGTCAGAGATTCCGGGGCACGCACCTCGAGGTCGGTGGAATGAGGCGTAAACTGAc < 2:7726318/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTACAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 1:4357317/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 1:7595657/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 1:9602790/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 2:5058196/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 2:7645469/140‑1 (MQ=255) gACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCACAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAc < 2:9389034/140‑1 (MQ=255) aCCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACg > 2:2814129/1‑140 (MQ=255) aCCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTAGGTCGGTGGAATTAGGCGTAAATTGACg > 2:8698716/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTACACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAAGTAGGCGTAAAATGACGc > 2:9151407/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaagc < 2:5407758/104‑1 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:8541096/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:7249891/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 1:2925854/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 1:3586774/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 1:3980851/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 1:8941285/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:2734184/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:2395068/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:3077608/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:3487649/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:4365732/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTGTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:9140030/1‑140 (MQ=255) cccACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGAATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCACGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGc > 2:6767007/1‑140 (MQ=255) ccaccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCa < 1:4994897/140‑1 (MQ=255) ccaccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCa > 2:9554736/1‑140 (MQ=255) ccaccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCa < 1:3350251/140‑1 (MQ=255) caccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCAt > 1:6136332/1‑140 (MQ=255) caccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCAt < 2:2538912/140‑1 (MQ=255) accaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATc > 1:7720786/1‑140 (MQ=255) accaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATc > 1:5298319/1‑140 (MQ=255) accaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATc > 1:7246131/1‑140 (MQ=255) accaATGT‑AAAAAAGCGCCCTAAAGGCGCTGTTGTGCTATGCGGGCATCCGCAATTTCACGTTGTAATCCTGATGACATCGTCAGAGCTTACTGGGCAAGCAACTCTATGTCGGTGGACGGAGGCGTAAATCGACGCATc > 2:3981084/1‑140 (MQ=37) ccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATcc < 2:7881554/140‑1 (MQ=255) ccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATcc > 1:5635218/1‑140 (MQ=255) ccaATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATcc < 1:1946114/140‑1 (MQ=255) caATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCt > 2:8380018/1‑140 (MQ=255) aaTGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTg < 2:817423/140‑1 (MQ=255) aaTGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTg < 1:657782/140‑1 (MQ=255) aTGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCATCTATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGTCGCATCCTGc < 1:8053720/140‑1 (MQ=255) | GCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGT‑AAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCA > NZ_CP025268/780725‑780998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |