Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 1,774,293 (G)10→7 coding (406‑408/1116 nt) ydiK → AI‑2E family transporter YdiK

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 1774289 =15 (0.050)381 (1.350) 97/262 0.1 96.3% coding (402/1116 nt) ydiK AI‑2E family transporter YdiK
?NZ_CP025268 = 1774285 15 (0.050)coding (398/1116 nt) ydiK AI‑2E family transporter YdiK

Only 100 of 417 total aligned reads displayed.

CGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGGC  >  NZ_CP025268/1774154‑1774428
                                                                                                                                        |                                                                                                                                            
gtatcgtcgacggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatgggg                                                                                                                                           <  2:4996691‑M1/4‑1 (MQ=255)
gtatcgtcgacggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccaatccggtgattggcgcgaagctgtatgcaggctggcacaacttgccggatatgggg                                                                                                                                           <  2:3741022‑M1/4‑1 (MQ=255)
   tcgtcgacggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcgggctcgcacaacttgctggagatggggggg                                                                                                                                        <  2:2071390‑M1/7‑1 (MQ=255)
    cgtcgacggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGa                                                                                                                                      <  1:617178‑M1/8‑1 (MQ=255)
      tcgacggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACg                                                                                                                                    <  2:3035377‑M1/10‑1 (MQ=255)
       tgCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGTTGATTTGCGCTTAGCTGTATTCAGGCTTGCACAGCTTGCTTGATAGTgggggggcggcgat                                                                                                                                    >  2:2896997/2‑136 (MQ=255)
           ggcagcggcccgctaattaaagccctttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGAt                                                                                                                               <  1:100870‑M1/15‑1 (MQ=255)
           ggcagcggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGAt                                                                                                                               <  1:1364815‑M1/15‑1 (MQ=255)
             cagcggcccgctaattaaagccattaccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCa                                                                                                                             <  2:4583392‑M1/17‑1 (MQ=255)
                cggcccgctaattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATgg                                                                                                                          <  1:2164835‑M1/20‑1 (MQ=255)
                        taattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTc                                                                                                                  >  1:3799111‑M1/113‑140 (MQ=255)
                        taattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTc                                                                                                                  >  1:4593530‑M1/113‑140 (MQ=255)
                        taattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTc                                                                                                                  >  2:1644465‑M1/113‑140 (MQ=255)
                        taattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTc                                                                                                                  >  2:3303367‑M1/113‑140 (MQ=255)
                        taattaaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTc                                                                                                                  >  2:391036‑M1/113‑140 (MQ=255)
                            taaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGcc                                                                                                              >  1:5090422‑M1/109‑140 (MQ=255)
                            taaagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGcc                                                                                                              >  1:4885535‑M1/109‑140 (MQ=255)
                              aagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCt                                                                                                            >  1:2461710‑M1/107‑140 (MQ=255)
                              aagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCt                                                                                                            >  1:1153630‑M1/107‑140 (MQ=255)
                              aagccatttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCt                                                                                                            >  1:1073957‑M1/107‑140 (MQ=255)
                               ggacatctccagaggtgacatgacgttacccgatctgccgtggcttaataccattccgatgattgacgagaagctgtatgcaggctggcacaacttgctggatatGGGAGGGACGGCGATCATGGCGAAAGTCCGCCCtt                                                                                                           >  2:1396882‑M1/106‑140 (MQ=255)
                                    tttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcaccccttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATAtt                                                                                                      >  2:2934967‑M1/101‑140 (MQ=255)
                                    tttccagcggtgacatgacgttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATAtt                                                                                                      <  1:5014672‑M1/40‑1 (MQ=255)
                                            aCATGACGTTACCCCATCTGGCGTGGCTTAATATCCTGCCGCGGATTGGCTTGAGGCTGGATGCAGGCTGGCACAACTTGCTGGAT‑‑GTGGGGGGGACGGCGATCATGGCGGAAGTCCGCCCTTGCATTGGcaccaccacc                                                                                          >  2:3215853/1‑140 (MQ=255)
                                                        ttacccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGtt                                                                                  <  2:2280974‑M1/60‑1 (MQ=255)
                                                          acccgatctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCg                                                                                <  2:4322435‑M1/62‑1 (MQ=255)
                                                               atctggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTggg                                                                           <  2:2482218‑M1/67‑1 (MQ=255)
                                                                   ggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAgg                                                                       >  1:857229‑M1/70‑140 (MQ=255)
                                                                   ggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAgg                                                                       >  1:1608347‑M1/70‑140 (MQ=255)
                                                                   ggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAgg                                                                       <  1:3586091‑M1/71‑1 (MQ=255)
                                                                   ggcgtggcttaataccattccggtgattggcgcgaagctgtatgcaggatggcacaacttgatggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCGGTATATTGGCACCACCACCACCGGGGTAGTTGGGCAgg                                                                       <  2:803458‑M1/71‑1 (MQ=255)
                                                                     cgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggcg                                                                     <  2:2402286‑M1/73‑1 (MQ=255)
                                                                     cgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggcg                                                                     <  1:545373‑M1/73‑1 (MQ=255)
                                                                     cgtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggcg                                                                     <  1:1521644‑M1/73‑1 (MQ=255)
                                                                     cgtggcttaataccattccggtgactggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGGTCGTTGGGCAggcg                                                                     <  2:505755‑M1/73‑1 (MQ=255)
                                                                      gtggcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacagctggctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTGATATTGGCACCACCACCACCTGGTTCGTTGGGGAggcgg                                                                    <  2:1925380‑M1/74‑1 (MQ=255)
                                                                         gcttaataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGgcgc                                                                 <  1:1212888‑M1/77‑1 (MQ=255)
                                                                              ataccattccggtgattggcgcgaagctgtatgcaggctggcaccacttgctggagctGGGGGGGACGTCTATCATGGCGCAAGTCCGCCCTTATATTGGCACCACCACCACCCGGGTCGTTGGGCACGCGGCGCATATc                                                            <  2:1597047‑M1/82‑1 (MQ=255)
                                                                              ataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                                                            <  1:3987758‑M1/82‑1 (MQ=255)
                                                                              ataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                                                            >  1:538085‑M1/59‑140 (MQ=255)
                                                                              ataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                                                            <  1:4085587‑M1/82‑1 (MQ=255)
                                                                              ataccattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                                                            <  1:736023‑M1/82‑1 (MQ=255)
                                                                                accattccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCgg                                                          >  1:456201‑M1/57‑140 (MQ=255)
                                                                                   attccggtgattggcgcgaagctgtatgcaggctggcacaacttgctgtatatGGGGGGGACGGCGATCATAGCGATGGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTGGGGCAGGCGGCGCATAtcggggg                                                       <  2:4268923‑M1/87‑3 (MQ=255)
                                                                                   attccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcg                                                       <  2:3399869‑M1/87‑1 (MQ=255)
                                                                                   attccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcg                                                       >  1:2108962‑M1/54‑140 (MQ=255)
                                                                                   attccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcg                                                       >  1:2320209‑M1/54‑140 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGCCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  2:4475357‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCTCATATCGGgcgc                                                      <  2:3600688‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  1:1737275‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  2:1559234‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  1:2380653‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  1:4213442‑M1/88‑1 (MQ=255)
                                                                                    ttccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGgcgc                                                      <  1:4965184‑M1/88‑1 (MQ=255)
                                                                                     tccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt                                                     >  1:897938‑M1/52‑140 (MQ=255)
                                                                                     tccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt                                                     >  2:282668‑M1/52‑140 (MQ=255)
                                                                                     tccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt                                                     >  1:4709078‑M1/52‑140 (MQ=255)
                                                                                     tccggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt                                                     >  2:1245912‑M1/52‑140 (MQ=255)
                                                                                       cggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCttt                                                   >  2:4679526‑M1/50‑140 (MQ=255)
                                                                                       cggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCttt                                                   >  1:2686336‑M1/50‑140 (MQ=255)
                                                                                       cggtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCttt                                                   >  1:400454‑M1/50‑140 (MQ=255)
                                                                                         gtgattggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTAt                                                 <  2:2965091‑M1/93‑1 (MQ=255)
                                                                                         gtgattggcgcgaagctgtatgcaggctggcacaacttgatggatacGGGGGGGACGGCAGTCATGGAGGAGATCCGCCCTTATAGTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGACGCATCTCGGGcgcttgat                                                 <  2:1968216‑M1/93‑4 (MQ=255)
                                                                                            attggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGt                                              >  2:3187293‑M1/45‑140 (MQ=255)
                                                                                               ggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt                                                     >  1:3747935‑M1/42‑130 (MQ=255)
                                                                                               ggcgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCa                                           >  1:973982‑M1/42‑140 (MQ=255)
                                                                                                 cgcgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCATCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCAtt                                         >  1:3195737‑M1/40‑140 (MQ=255)
                                                                                                   cgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATtgt                                       <  1:3837858‑M1/103‑1 (MQ=255)
                                                                                                   cgaagctgtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATtgt                                       >  1:1304634‑M1/38‑140 (MQ=255)
                                                                                                          gtatgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGa                                >  2:1049294‑M1/31‑140 (MQ=255)
                                                                                                             tgcaggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGACAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGc                             <  2:2179983‑M1/113‑1 (MQ=255)
                                                                                                               caggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCtt                           >  2:1434561‑M1/26‑140 (MQ=255)
                                                                                                                aggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtc                          <  2:534024‑M1/116‑1 (MQ=255)
                                                                                                                aggctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtc                          <  1:3666790‑M1/116‑1 (MQ=255)
                                                                                                                  gctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTTGCACCACCACCACCTGGGTCGTTGGGCAGGCGGCGCATATCGGGCGCTCTATGGTGCATTCTGCGGTGATGCTtctc                        <  1:2827003‑M1/118‑1 (MQ=255)
                                                                                                                  gctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtctc                        <  2:2627463‑M1/118‑1 (MQ=255)
                                                                                                                  gctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtctc                        <  1:2577458‑M1/118‑1 (MQ=255)
                                                                                                                  gctggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGGTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTtctc                        <  2:4072955‑M1/118‑1 (MQ=255)
                                                                                                                     ggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTc                     <  2:3527274‑M1/121‑1 (MQ=255)
                                                                                                                     ggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTc                     <  1:4805666‑M1/121‑1 (MQ=255)
                                                                                                                     ggcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTc                     <  1:3330162‑M1/121‑1 (MQ=255)
                                                                                                                      gcacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCa                    >  1:812784‑M1/19‑140 (MQ=255)
                                                                                                                       cacaacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAg                   <  2:1138426‑M1/123‑1 (MQ=255)
                                                                                                                       cacaaactgctggataaGGGGGGGCACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCa                    >  1:3517610‑M1/18‑140 (MQ=255)
                                                                                                                         caacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTg                 >  1:1902428‑M1/16‑140 (MQ=255)
                                                                                                                         caacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTg                 >  2:1772232‑M1/16‑140 (MQ=255)
                                                                                                                         caacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTg                 >  2:4897160‑M1/16‑140 (MQ=255)
                                                                                                                         caacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTg                 >  1:1711114‑M1/16‑140 (MQ=255)
                                                                                                                         caacttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTg                 >  1:1998733‑M1/16‑140 (MQ=255)
                                                                                                                            cttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGccc              <  2:3797611‑M1/128‑1 (MQ=255)
                                                                                                                            cttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGccc              >  1:516103‑M1/13‑140 (MQ=255)
                                                                                                                            cttgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGccc              >  2:4750100‑M1/13‑140 (MQ=255)
                                                                                                                              tgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCctg            >  1:3093412‑M1/11‑140 (MQ=255)
                                                                                                                              tgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCctg            >  1:2868690‑M1/11‑140 (MQ=255)
                                                                                                                              tgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCctg            >  1:432954‑M1/11‑140 (MQ=255)
                                                                                                                              tgctggatatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCctg            >  2:5083243‑M1/11‑140 (MQ=255)
                                                                                                                                    atatGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATg                              >  2:2580564‑M1/5‑116 (MQ=255)
                                                                                                                                        GGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTTTACTGgc  <  2:726236‑M1/140‑1 (MQ=255)
                                                                                                                                        GGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGgc  <  1:4388089‑M1/140‑1 (MQ=255)
                                                                                                                                        GGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGgc  >  2:2777865‑M1/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                            
CGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGGC  >  NZ_CP025268/1774154‑1774428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.