Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 1,774,293 (G)10→7 coding (406‑408/1116 nt) ydiK → AI‑2E family transporter YdiK

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 1774289 =15 (0.050)381 (1.350) 97/262 0.1 96.3% coding (402/1116 nt) ydiK AI‑2E family transporter YdiK
?NZ_CP025268 = 1774285 15 (0.050)coding (398/1116 nt) ydiK AI‑2E family transporter YdiK

Only 100 of 414 total aligned reads displayed.

AGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTAC  >  NZ_CP025268/1774149‑1774424
                                                                                                                                         |                                                                                                                                           
 gTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggg                                                                                                                                         <  1:3556846‑M2/140‑5 (MQ=255)
 gTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggg                                                                                                                                         <  2:4996691‑M2/140‑5 (MQ=255)
 gTATCGCCTACGCCAGCCGCCCGCTAATTAAAGCCATTTCCAGCGGTGCCAGAACGTTACCCGATCTGTCGTCGCTTAATACCCTTCCGGCGATTAACGCAACCCTGTATGCCGGCTGGCACAATTTGCCGGATCTggtg                                                                                                                                         <  2:2750227/140‑3 (MQ=255)
    tcgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCGGGCTCGCACAACTTGCTGGAGATggggggg                                                                                                                                      <  2:2071390‑M2/140‑8 (MQ=255)
    tcgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATggggggg                                                                                                                                      >  2:3215043‑M2/1‑133 (MQ=255)
     cgtcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAGggggggga                                                                                                                                     <  1:624922‑M2/140‑9 (MQ=255)
       tcgACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacg                                                                                                                                   <  2:3035377‑M2/140‑11 (MQ=255)
         gACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggc                                                                                                                                 <  1:930511‑M2/140‑13 (MQ=255)
          aCGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcg                                                                                                                                <  2:3893857‑M2/140‑14 (MQ=255)
            tgCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGTTGATTTGCGCTTAGCTGTATTCAGGCTTGCACAGCTTGCTTGATAGTgggggggcggcgat                                                                                                                               >  2:2896997/2‑136 (MQ=255)
            ggCAGCGGCCCGCTAATTAAAGCCCTTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgat                                                                                                                              <  1:100870‑M2/140‑16 (MQ=255)
            ggCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgat                                                                                                                              <  1:1364815‑M2/140‑16 (MQ=255)
                    cccGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcga                                                                                                                      <  1:3716187‑M2/140‑24 (MQ=255)
                         tAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtc                                                                                                                 >  2:3303367‑M2/1‑112 (MQ=255)
                         tAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtc                                                                                                                 >  2:1644465‑M2/1‑112 (MQ=255)
                               aaGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgccct                                                                                                           >  1:2461710‑M2/1‑106 (MQ=255)
                               aaGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgccct                                                                                                           >  1:1153630‑M2/1‑106 (MQ=255)
                               aaGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgccct                                                                                                           >  1:1073957‑M2/1‑106 (MQ=255)
                                ggacatcTCCAGAGGTGACATGACGTTACCCGATCTGCCGTGGCTTAATACCATTCCGATGATTGACGAGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggagggacggcgatcatggcgaaagtccgccctt                                                                                                          >  2:1396882‑M2/4‑105 (MQ=255)
                                     tttCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACCCCTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatatt                                                                                                     >  2:2934967‑M2/1‑100 (MQ=255)
                                     tttCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTTGATATgggggggacggcgatcatggcgaaagtccgcccttatatt                                                                                                     <  1:881563‑M2/140‑41 (MQ=255)
                                     tttCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatatt                                                                                                     <  1:5014672‑M2/140‑41 (MQ=255)
                                      ttCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattg                                                                                                    <  2:608638‑M2/140‑42 (MQ=255)
                                             ggTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccac                                                                                             <  1:474412‑M2/140‑49 (MQ=255)
                                               tGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccacca                                                                                           <  1:4897160‑M2/140‑51 (MQ=255)
                                                 aCATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGGGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccacc                                                                                         <  1:3075219‑M2/140‑53 (MQ=255)
                                                 aCATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccacc                                                                                         <  1:343141‑M2/140‑53 (MQ=255)
                                                      aCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctg                                                                                    >  1:2153607‑M2/1‑83 (MQ=255)
                                                         ttACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggtt                                                                                 <  2:2280974‑M2/140‑61 (MQ=255)
                                                           aCCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcg                                                                               <  2:4322435‑M2/140‑63 (MQ=255)
                                                                aTCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacgtcgaacatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttggg                                                                          <  1:3638040‑M2/140‑68 (MQ=255)
                                                                aTCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttggg                                                                          <  2:2482218‑M2/140‑68 (MQ=255)
                                                                 tCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggc                                                                         <  1:4989651‑M2/140‑69 (MQ=255)
                                                                    ggCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGATGGCACAACTTGATGGATATgggggggacggcgatcatggcgaaagtccgccggtatattggcaccaccaccaccggggtagttgggcagg                                                                      <  2:803458‑M2/140‑72 (MQ=255)
                                                                     gCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggc                                                                     <  2:1582567‑M2/140‑73 (MQ=255)
                                                                     gCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggc                                                                     <  2:46083‑M2/140‑73 (MQ=255)
                                                                      cGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcg                                                                    <  2:2402286‑M2/140‑74 (MQ=255)
                                                                       gTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAGCTGGCTGGATATgggggggacggcgatcatggcgaaagtccgccctgatattggcaccaccaccacctggttcgttggggaggcgg                                                                   <  2:1925380‑M2/140‑75 (MQ=255)
                                                                       gTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcgg                                                                   >  2:5036405‑M2/1‑66 (MQ=255)
                                                                          gCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgc                                                                <  1:1212888‑M2/140‑78 (MQ=255)
                                                                           cTTAATACCATTCCGGTGATAGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgca                                                               <  1:1515159‑M2/140‑79 (MQ=255)
                                                                               aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACCACTTGCTGGAGCTgggggggacgtctatcatggcgcaagtccgcccttatattggcaccaccaccacccgggtcgttgggcacgcggcgcatatc                                                           <  2:1597047‑M2/140‑83 (MQ=255)
                                                                               aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatc                                                           <  1:4085587‑M2/140‑83 (MQ=255)
                                                                               aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatc                                                           <  1:3987758‑M2/140‑83 (MQ=255)
                                                                               aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatc                                                           <  1:540813‑M2/140‑83 (MQ=255)
                                                                               aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatc                                                           <  1:736023‑M2/140‑83 (MQ=255)
                                                                                 aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgg                                                         >  1:2857478‑M2/1‑56 (MQ=255)
                                                                                 aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgg                                                         >  2:3666364‑M2/1‑56 (MQ=255)
                                                                                 aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgg                                                         >  1:4839929‑M2/1‑56 (MQ=255)
                                                                                    aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGTATATgggggggacggcgatcatagcgatggtccgcccttatattggcaccaccaccacctggttcgtggggcaggcggcgcatatcggggg                                                      <  2:4268923‑M2/140‑88 (MQ=255)
                                                                                    aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcg                                                      <  2:3399869‑M2/140‑88 (MQ=255)
                                                                                    aTTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcg                                                      >  2:1009069‑M2/1‑53 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggctcatatcgggcgc                                                     <  2:3600688‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                     <  1:2095455‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                     <  1:1737275‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                     <  1:2380653‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                     <  2:3776446‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgc                                                     <  1:4213442‑M2/140‑89 (MQ=255)
                                                                                     ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccaccgggttcgttgggcaggaggcgcatatcggacgc                                                     <  1:2280445‑M2/140‑89 (MQ=255)
                                                                                      tCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgct                                                    >  2:1245912‑M2/1‑51 (MQ=255)
                                                                                      tCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgct                                                    >  2:282668‑M2/1‑51 (MQ=255)
                                                                                      tCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgct                                                    >  1:3796124‑M2/1‑51 (MQ=255)
                                                                                        cGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcttt                                                  >  2:51185‑M2/1‑49 (MQ=255)
                                                                                        cGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcttt                                                  >  1:4404824‑M2/1‑49 (MQ=255)
                                                                                        cGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgcttt                                                  >  1:400454‑M2/1‑49 (MQ=255)
                                                                                          gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttat                                                <  2:2965091‑M2/140‑94 (MQ=255)
                                                                                          gTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGATGGATACgggggggacggcagtcatggaggagatccgcccttatagtggcaccaccaccacctggttcgttgggcaggcgacgcatctcgggcgcttgat                                                <  2:1968216‑M2/140‑94 (MQ=255)
                                                                                                ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgca                                          >  2:474412‑M2/1‑41 (MQ=255)
                                                                                                  cgcgAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcatcaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcatt                                        >  1:3195737‑M2/1‑39 (MQ=255)
                                                                                                    cgAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgt                                      <  1:3837858‑M2/140‑104 (MQ=255)
                                                                                                    cgAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgt                                      >  1:1304634‑M2/1‑37 (MQ=255)
                                                                                                           gTATGCAGGCTGGCACAACTTGCTGGATATgggggggacgtcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctga                               >  1:530719‑M2/1‑30 (MQ=255)
                                                                                                           gTATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctga                               >  2:1049294‑M2/1‑30 (MQ=255)
                                                                                                            tATGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgat                              <  1:2668033‑M2/140‑112 (MQ=255)
                                                                                                              tGCAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgacagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgc                            <  2:2179983‑M2/140‑114 (MQ=255)
                                                                                                                cAGGCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgctt                          >  2:1434561‑M2/1‑25 (MQ=255)
                                                                                                                   gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctc                       <  1:2577458‑M2/140‑119 (MQ=255)
                                                                                                                   gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctc                       <  1:549821‑M2/140‑119 (MQ=255)
                                                                                                                   gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctc                       <  2:2627463‑M2/140‑119 (MQ=255)
                                                                                                                   gCTGGCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctgggtcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctc                       <  2:4072955‑M2/140‑119 (MQ=255)
                                                                                                                   gCTGGCACAACTTGCTGGATATgggagggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctgtatggtgcattgtgcgctgatgcttctc                       <  1:4673445‑M2/140‑119 (MQ=255)
                                                                                                                      ggCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttc                    <  1:3330162‑M2/140‑122 (MQ=255)
                                                                                                                      ggCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttc                    <  2:3527274‑M2/140‑122 (MQ=255)
                                                                                                                      ggCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttc                    <  1:2778946‑M2/140‑122 (MQ=255)
                                                                                                                      ggCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttc                    <  2:4450768‑M2/140‑122 (MQ=255)
                                                                                                                      ggCACAACTTGCTGGATATTGGGGGGG‑‑‑CGGCGTACATACCTAAAGTTCGCCCGTATATTTTAAGCGCCACCATCTGGGTCGTCGGGCAGGCGGTACATATCGGGCGTTTTATGTTGCATTGTGAGCTGTTCCTTCTCTTc                 >  2:3183469/1‑140 (MQ=255)
                                                                                                                       gCACAACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttca                   >  1:812784‑M2/1‑18 (MQ=255)
                                                                                                                        cacaACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcag                  <  2:1138426‑M2/140‑124 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  2:1772232‑M2/1‑15 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  2:4897160‑M2/1‑15 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  1:1998733‑M2/1‑15 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  1:1902428‑M2/1‑15 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  1:1595777‑M2/1‑15 (MQ=255)
                                                                                                                          caACTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtg                >  1:1711114‑M2/1‑15 (MQ=255)
                                                                                                                           aaCTTGCTTGCTATggggcggacggcgatcatggcgaaagtcggcccttatattggcaccaccactacctggttcgttgcgcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctattcagtgc               >  2:4551755‑M2/1‑14 (MQ=255)
                                                                                                                             cTTGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccc             >  1:5091414‑M2/1‑12 (MQ=255)
                                                                                                                               tGCTGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctg           >  1:432954‑M2/1‑10 (MQ=255)
                                                                                                                                  tGGATATgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcagatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctgctg        <  1:4574348‑M2/140‑134 (MQ=255)
                                                                                                                                     atatgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatg                             >  2:2580564‑M2/1‑4 (MQ=255)
                                                                                                                                         tgggggggacggcgatcatggcgaaagtccgcccttatattggcaccaccaccacctggttcgttgggcaggcggcgcatatcgggcgctttatggtgcattgtgcgctgatgcttctcttcagtgccctgctgtactgg  <  2:5073982‑M2/140‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                           
AGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTAC  >  NZ_CP025268/1774149‑1774424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.