| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP025268 | 262,011 | Δ34,307 bp | ykfI–intF | 46 genes ykfI, yafW, ykfH, ykfG, yafX, ykfF, CXP41_RS01315, CXP41_RS01320, CXP41_RS01325, CXP41_RS01330, yafZ, ykfA, perR, CXP41_RS01355, CXP41_RS01360, CXP41_RS01365, ykfC, CXP41_RS01385, mmuP, mmuM, fbpC, CXP41_RS01405, CXP41_RS01410, CXP41_RS01410, CXP41_RS01420, CXP41_RS01425, yagB, CXP41_RS24560, yagA, yagE, yagF, yagG, yagH, xynR, argF, argL, CXP41_RS01470, CXP41_RS01480, CXP41_RS01480, CXP41_RS01490, yagK, yagL, CXP41_RS01505, ykgV, CXP41_RS01515, intF |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP025268 | 262011 | 296317 | 34307 | 357 [0] | [2] 358 | ykfI–intF | ykfI,yafW,ykfH,ykfG,yafX,ykfF,CXP41_RS01315,CXP41_RS01320,CXP41_RS01325,CXP41_RS01330,yafZ,ykfA,perR,CXP41_RS01355,CXP41_RS01360,CXP41_RS01365,ykfC,CXP41_RS01385,mmuP,mmuM,fbpC,CXP41_RS01405,CXP41_RS01410,CXP41_RS01410,CXP41_RS01420,CXP41_RS01425,yagB,CXP41_RS24560,yagA,yagE,yagF,yagG,yagH,xynR,argF,argL,CXP41_RS01470,CXP41_RS01480,CXP41_RS01480,CXP41_RS01490,yagK,yagL,CXP41_RS01505,ykgV,CXP41_RS01515,intF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 262010 | 0 (0.000) | 206 (1.240) | 58/156 | 0.1 | 100% | intergenic (+11/+371) | CXP41_RS01280/ykfI | tRNA‑Thr/type IV toxin‑antitoxin system toxin YkfI |
| ? | NZ_CP025268 | 296318 = | 0 (0.000) | intergenic (‑170/+115) | intF/CXP41_RS01530 | integrase family protein/LysR substrate‑binding domain‑containing protein | |||||
Only 100 of 357 total aligned reads displayed.
GTTTTAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACCAAAAAGGCCTGATAGGGCTTCGCTCACTATACATC > NZ_CP025268/261874‑262147 | ttttAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagt < 1:3970004‑M1/140‑5 (MQ=255) ttttAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagt < 2:1444668‑M1/140‑5 (MQ=255) aCCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccc < 2:5004158‑M1/140‑10 (MQ=255) ccTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccc < 1:3304259‑M1/140‑11 (MQ=255) cTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttacccca < 2:3700742‑M1/140‑12 (MQ=255) gTCCACCGTGAATCCCGTTCGTTAAGATGTCCTTTCCGGGCCGATATAGCTCAGTTGGTAGGGCAGCGCATTCGTAAAGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagctaccgcatat > 2:1247928‑M1/1‑126 (MQ=255) ccACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatattt < 1:3490527‑M1/140‑17 (MQ=255) ccACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatattt < 2:1345918‑M1/140‑17 (MQ=255) ccGTGATTCACGTTCGTTAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaa < 2:3812592‑M1/140‑20 (MQ=255) ccGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaa < 1:1028878‑M1/140‑20 (MQ=255) cGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaat > 1:1387623‑M1/1‑120 (MQ=255) cGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaat > 1:1911749‑M1/1‑120 (MQ=255) tGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatac > 1:4461929‑M1/1‑118 (MQ=255) aTTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacac > 1:4762048‑M1/1‑116 (MQ=255) aTTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacac < 2:1188091‑M1/140‑25 (MQ=255) aTTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacac > 2:4179874‑M1/1‑116 (MQ=255) ttCACGTTCGTGACCATGTCCTTGCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 1:3885017‑M1/140‑26 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATCGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 1:1355482‑M1/140‑26 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc > 2:3171824‑M1/1‑115 (MQ=255) ttCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGCTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTGCGACTCCTATTAGCGGCACCATTAAAAGCAAAgagttacaccatatgtaaatacacc < 2:3604128‑M1/140‑26 (MQ=255) ttCACATTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc < 2:4478940‑M1/140‑26 (MQ=255) tttcGTGAACATTTCATTTCAGGGCCGATATAGCTCACTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtt < 2:752602‑M1/139‑31 (MQ=255) gTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtt > 1:2325039‑M1/1‑110 (MQ=255) tCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttc < 2:3259689‑M1/140‑33 (MQ=255) tCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttc < 1:5087750‑M1/140‑33 (MQ=255) aTGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtg < 1:1603288‑M1/140‑41 (MQ=255) ttcCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgcc < 1:678864‑M1/139‑43 (MQ=255) ccTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgt > 2:2764710‑M1/1‑96 (MQ=255) ttCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatt > 1:438491‑M1/1‑93 (MQ=255) tCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtattt > 1:411927‑M1/1‑92 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTCTCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 2:4701547‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacctcgtttcctcctgtgccgtatttgtg < 2:1040931‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 1:3652360‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 1:770801‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 1:3746559‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 2:4293654‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 1:3221169‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 1:3164421‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtg < 2:3450416‑M1/140‑52 (MQ=255) gggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTAACGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttactcctgtgccgtatttgtg < 1:2577938‑M1/140‑52 (MQ=255) ggCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgc > 2:3991815‑M1/1‑88 (MQ=255) atatAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattg > 1:4856448‑M1/1‑83 (MQ=255) tatcGCTCAGTTGCTCGAGCAGCGCATTCGCAACGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACAACTAAAATCAAAgcgttaccccatatttaaatacaccacctttcctcctgtgccgtatttgtgccattgt < 2:862938‑M1/140‑59 (MQ=255) aGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaac < 2:2038583‑M1/140‑62 (MQ=255) cTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacct > 1:4283859‑M1/1‑77 (MQ=255) cTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaacct > 2:4425143‑M1/1‑77 (MQ=255) cTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacacc > 1:3822976‑M1/1‑77 (MQ=255) gTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggc > 1:1454618‑M1/1‑73 (MQ=255) ttGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 1:562338‑M1/1‑72 (MQ=255) ttGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 1:1811328‑M1/1‑72 (MQ=255) ttGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATGATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 2:805220‑M1/1‑72 (MQ=255) tgggtaGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggca > 2:2879666‑M1/3‑72 (MQ=255) gTAGAGCAGCGCATTCGTAATGCGCAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaatt < 2:17314‑M1/140‑72 (MQ=255) gTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaatt < 2:1887590‑M1/140‑72 (MQ=255) gTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCCACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgggccattgtaaccttggcaatt < 1:1479477‑M1/140‑72 (MQ=255) agagCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattca > 1:3708132‑M1/1‑67 (MQ=255) gagCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcat < 2:519239‑M1/140‑75 (MQ=255) agcagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatc > 1:3263872‑M1/1‑65 (MQ=255) gcagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatca > 1:4207485‑M1/1‑64 (MQ=255) gcagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatca > 1:4525707‑M1/1‑64 (MQ=255) gcagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATCATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatca < 1:110052‑M1/140‑77 (MQ=255) cccgccaattcgtcaTGCGTAGGTCGTAGGTTCGACTGCTATTATCGGGACCATTCAAAACAAAgagctcccccatctttaaatacaccacctttcctcctgcgccgtatttgtgccattgtaaccttggcaattcatca < 2:665097‑M1/133‑77 (MQ=255) cagcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaa > 1:1268386‑M1/1‑63 (MQ=255) agcGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaa > 2:1005067‑M1/1‑62 (MQ=255) cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 1:2380417‑M1/1‑60 (MQ=255) cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 1:2606517‑M1/1‑60 (MQ=255) cgcATTCGTAATGCGAAGCTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaat > 2:3789509‑M1/1‑60 (MQ=255) gcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaata < 1:3601684‑M1/140‑82 (MQ=255) cATTCGTAATGCGAAGCTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatac > 1:61681‑M1/1‑58 (MQ=255) aTTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatact < 2:2706824‑M1/140‑84 (MQ=255) tCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttgtcaattcatcaaaatactgt > 2:3908228‑M1/1‑55 (MQ=255) ctaATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccccgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttc < 2:1094796‑M1/139‑88 (MQ=255) aTGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagctaccccatatttaaatacatcacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctga > 2:2352399‑M1/1‑50 (MQ=255) gCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgctgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgaca < 1:4697637‑M1/140‑93 (MQ=255) gCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgaca < 1:5003798‑M1/140‑93 (MQ=255) cGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaattacaccacgtttcctcctgggccgtatttgtgccattgtaacctttgcaattcatcaaagtactgttctgatat > 2:1970387‑M1/1‑47 (MQ=255) cGAAGGCCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacat < 2:1768852‑M1/140‑94 (MQ=255) aaGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAcagttaccacatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatca > 2:4085951‑M1/1‑45 (MQ=255) aaGGTCGTAGGCTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatagttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcacaatactgttctgacatca > 2:3636836‑M1/1‑45 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgcccttgtaaccttggcaattcatcaaaatactgttctgacatcagg < 2:4655714‑M1/140‑98 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcagg < 2:3103731‑M1/140‑98 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcagg < 1:2798816‑M1/140‑98 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcagg < 2:2182755‑M1/140‑98 (MQ=255) ggTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaacttggcaattcatcaaaatactgttctgacatcagg < 1:165537‑M1/140‑98 (MQ=255) gTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgggccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggc > 1:2860381‑M1/1‑42 (MQ=255) gTCATAGGTGCCACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaactacaccacgtatcctcctgtgccgtatttgtgccatcgtaaccttggcaattcatcaaaatactgttctgacatcaggc < 2:4901318‑M1/140‑99 (MQ=255) tcggttCGCCTCCTATTATCGGCACCATTGAAATCCAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtg < 1:2674551‑M1/138‑103 (MQ=255) cGACTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatagttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtg > 2:2023913‑M1/1‑32 (MQ=255) aCTCCTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgca < 1:3089740‑M1/140‑111 (MQ=255) cTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagaca > 1:2208894‑M1/1‑26 (MQ=255) cTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagaca > 1:2152505‑M1/1‑26 (MQ=255) cTATTATCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagaca > 1:3425846‑M1/1‑26 (MQ=255) attatCGGCACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttactcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatt < 1:2336376‑M1/140‑117 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 2:4394547‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 1:2034850‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 1:940591‑M1/1‑16 (MQ=255) cACCATTAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaa > 2:157469‑M1/1‑16 (MQ=255) ttAAAATCAAAgagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgcaggtgcagacatttaagccaattgct > 1:1150529‑M1/1‑11 (MQ=255) aaagagttaccccatatttaaatacaccacgtttcctcctgtgccgtatttgttccattgtaacctttgcaattcatcaaaatactgttctgacatcagtcagtgcaggtgcagacatttaagccaattgccgccgccat > 2:1505060‑M1/1‑3 (MQ=255) aaagagttaccccatatttaaatacaccacgtttcctcctgtgccggctttgtgccattgtaaccttggcaattcatcaaaatactgttctgacatcaggcagtgaagatgcagacgtttaagccaatcgttgccgccat > 2:255161‑M1/1‑3 (MQ=255) | GTTTTAACCTTGTCCACCGTGATTCACGTTCGTGAACATGTCCTTTCAGGGCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACCAAAAAGGCCTGATAGGGCTTCGCTCACTATACATC > NZ_CP025268/261874‑262147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |