BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 3549238	417 (1.410)	39 (0.150) +TTTTTTAATGATACGGCGAC	26/236	4.7	10.2%	coding (1519/2085 nt)	malQ	4‑alpha‑glucanotransferase
*	?	NZ_CP025268	3549259 =	384 (1.300)	39 (0.150) +TTTTTTAATGATACGGCGAC	26/236	4.7	10.2%	coding (1498/2085 nt)	malQ	4‑alpha‑glucanotransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 402 total aligned reads displayed.

GTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACGCAGC  >  NZ_CP025268/3549120‑3549398

   gcagcAACCTCCATCGACTGCTCCCGATCCGCTCACGGTGCACGGAGCGTCTTCTCGTGGTCGTTTACGAAATACAACACTTTGTAAGAGTACACACCGCTGCGGCGCAGTGTCCCGACAAT‑CC‑CTAACGGTACGTT‑‑‑‑Acc                                                                                                                                          >  2:890152/4‑140 (MQ=255)

        aaCCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGATCGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTCAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACAGGTACGGT‑‑‑‑ACCGAGAt                                                                                                                                     >  1:2828176/1‑140 (MQ=255)

             ccctCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCTAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCa                                                                                                                                <  1:4238227/137‑1 (MQ=255)

               aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCAcc                                                                                                                              <  1:1261247/140‑1 (MQ=255)

               aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCAcc                                                                                                                              <  1:1893648/140‑1 (MQ=255)

                 cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCaa                                                                                                                            <  1:4915887/140‑1 (MQ=255)

                 cGACTGCGCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTGTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCaa                                                                                                                            <  1:2100271/140‑1 (MQ=255)

                  gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAAt                                                                                                                           <  1:731314/140‑1 (MQ=255)

                       cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                      >  2:3311870/1‑140 (MQ=255)

                       cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                      >  1:4443337/1‑140 (MQ=255)

                       cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                      >  1:466925/1‑140 (MQ=255)

                       cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                      >  2:4786869/1‑140 (MQ=255)

                          cGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATAc                                                                                                                   >  2:182533/1‑140 (MQ=255)

                               aCGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGa                                                                                                              <  1:3393292/140‑1 (MQ=255)

                                 gCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATg                                                                                                            <  1:4633709/140‑1 (MQ=255)

                                      cGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGtt                                                                                                       >  1:661751/1‑140 (MQ=255)

                                           cACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACtt                                                                                                  >  1:2040325/1‑140 (MQ=255)

                                                aaCGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCTTTTTT‑AA‑TGACCCGGACGCC‑‑‑‑ACCGAGATCTACACCAAGCACCATACAGCGATGACGTGTACGTTCGAg                                                                                             <  2:2964943/140‑1 (MQ=255)

                                                aaCGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAg                                                                                             <  1:4164260/140‑1 (MQ=255)

                                                   gTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGc                                                                                          >  1:2223637/1‑140 (MQ=255)

                                                      ttctCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAg                                                                                       >  2:4860538/1‑140 (MQ=255)

                                                          cGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGa                                                                                                              >  2:1918224/1‑113 (MQ=255)

                                                          cGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATc                                                                                   >  1:826770/1‑140 (MQ=255)

                                                          cGTGGTCCTTTTCGAAATATAGCACTTTGTAAGCGTACACACCGCTGTTGCGCAGCTTACCTTTTTTAATGATACGGCGAC‑‑C‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATc                                                                                   <  2:4143237/140‑1 (MQ=255)

                                                            tGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCga                                                                                 <  1:1481289/140‑1 (MQ=255)

                                                              gTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGCGTGCCAGAATCgaga                                                                               >  1:3013237/1‑140 (MQ=255)

                                                              gTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCgaga                                                                               >  1:1041766/1‑140 (MQ=255)

                                                              gTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCgaga                                                                               <  1:2130821/140‑1 (MQ=255)

                                                                cGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACC‑‑‑‑TT‑TT‑TTAATGATACGGCGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGc                                                                             <  2:1021372/140‑1 (MQ=255)

                                                                cGTTGTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGc                                                                             <  1:3540680/140‑1 (MQ=255)

                                                                     tCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatc                                                                        <  1:3197283/140‑1 (MQ=255)

                                                                          aTAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGTCAAT‑CT‑CTACCCGTCCGGC‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCa                                                                   <  2:171909/140‑1 (MQ=255)

                                                                          aTAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCa                                                                   <  1:2766936/140‑1 (MQ=255)

                                                                              agCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCgg                                                               >  2:1531663/1‑140 (MQ=255)

                                                                                cACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGAt                                                             >  2:4978936/1‑140 (MQ=255)

                                                                                 ccTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCTTTTTT‑AA‑TGATCCGGCCACC‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                            <  2:2600732/139‑1 (MQ=255)

                                                                                 aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACTGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                            <  1:3152652/140‑1 (MQ=255)

                                                                                 aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                            <  2:661751/140‑1 (MQ=255)

                                                                                  cTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATCCAGCGATGACGTTGACTTTCGAGCGCCAGAATCGAGAGCAGATCATCCACCGGATAg                                                           >  2:4609710/1‑140 (MQ=255)

                                                                                   tttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGt                                                          >  1:3476032/1‑140 (MQ=255)

                                                                                    ttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTg                                                         <  1:455401/140‑1 (MQ=255)

                                                                                     tGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGAGTATCCACCGGATAGTGa                                                        >  1:1174462/1‑140 (MQ=255)

                                                                                     tGTAAGAGTACAAACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGa                                                        >  2:5042787/1‑140 (MQ=255)

                                                                                      gTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGaa                                                       <  1:3291988/140‑1 (MQ=255)

                                                                                         agagTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTCCGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACAt                                                    <  2:2679561/140‑1 (MQ=255)

                                                                                             tACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCgag                                                                                >  2:3461352/1‑108 (MQ=255)

                                                                                             tACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                                                >  1:2812862/1‑140 (MQ=255)

                                                                                             tACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                                                >  2:5097177/1‑140 (MQ=255)

                                                                                             tACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGACCATCCACCGGATAGTGAACATAcgc                                                >  2:2071547/1‑140 (MQ=255)

                                                                                              acacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCCGTACGCT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGATTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgcg                                               <  2:4428431/140‑1 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACGAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCAAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGTATATACgcgc                                              >  2:3738006/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCTAGTGCCAGAATCTAGGTCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:4127071/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGCTCATCCACCGGATAGTGAACATACgcgc                                              >  1:1769246/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  2:2264095/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:1119667/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:1936177/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:439189/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:2336994/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:2491068/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:5018456/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:240392/1‑140 (MQ=255)

                                                                                               cacacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTGACTGTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                              >  1:3632064/1‑140 (MQ=255)

                                                                                                 cacCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGAGAGTGAACATACGCGccc                                            >  2:4052463/1‑140 (MQ=255)

                                                                                                  acCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCt                                           >  2:3223908/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGCGACCTTCACCAATCACCATACAGCGGTGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGGGAACATACGCGCCCTGAt                                        >  2:4632885/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  2:4282823/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  2:1195188/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  2:2126099/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  1:918893/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  2:3890888/1‑140 (MQ=255)

                                                                                                     gctgctGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                        >  2:3768981/1‑140 (MQ=255)

                                                                                                      ctgctgCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                       >  1:2913575/1‑140 (MQ=255)

                                                                                                      ctgctgCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                       >  1:2646286/1‑140 (MQ=255)

                                                                                                      ctgctgCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGAAGTTTACTTTCGAGTGCCCGAACCGTGAGCAGACGATCCACCTCACAGTGAACACACGCGCCCTGATc                                       >  2:2746148/1‑140 (MQ=255)

                                                                                                       tgctgcGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                                      >  1:4751486/1‑140 (MQ=255)

                                                                                                       tgctgcGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                                      >  2:244038/1‑140 (MQ=255)

                                                                                                           gcgcAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCTCCCTGATCTGCCg                                  <  1:4024094/140‑1 (MQ=255)

                                                                                                           gcgcAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCg                                  <  2:2812862/140‑1 (MQ=255)

                                                                                                           gcgcAGCTTACCGACAAT‑CT‑CGACAGGGAGGGC‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCg                                  <  2:3707735/140‑1 (MQ=255)

                                                                                                             gcAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtc                                <  1:1300672/140‑1 (MQ=255)

                                                                                                             gcAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtc                                <  1:3501445/140‑1 (MQ=255)

                                                                                                              cAGCTTACCGACACT‑CT‑CGACCCGTACGCT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtct                               <  2:4343872/140‑1 (MQ=255)

                                                                                                              cAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtct                               >  1:3863926/1‑140 (MQ=255)

                                                                                                              cAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtct                               >  1:3982629/1‑140 (MQ=255)

                                                                                                                 cTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGc                            >  2:1944758/1‑140 (MQ=255)

                                                                                                                  ttACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGcc                           <  2:2040325/140‑1 (MQ=255)

                                                                                                                   tACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCa                          >  1:5108608/1‑140 (MQ=255)

                                                                                                                       gACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACg                      <  2:3674483/140‑1 (MQ=255)

                                                                                                                       gACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACg                      <  1:1387326/140‑1 (MQ=255)

                                                                                                                                  tACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATccacc             >  1:216657/1‑140 (MQ=255)

                                                                                                                                        tacggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAAc       >  1:4803309/1‑140 (MQ=255)

                                                                                                                                         acggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACg      <  1:1596759/140‑1 (MQ=255)

                                                                                                                                          cggt‑‑‑‑acCGAGCTCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGACACGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCCGAACTGCCGCCTCGCCATACGGTATCCACCCCAAACgc     >  2:3071871/1‑140 (MQ=255)

                                                                                                                                          cggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGATTCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCTCCATACGGTATCCACCACCAAcac     >  2:3580812/1‑138 (MQ=255)

                                                                                                                                          cggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgc     >  1:1993966/1‑140 (MQ=255)

                                                                                                                                          cggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgc     >  1:370952/1‑140 (MQ=255)

                                                                                                                                          cggt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgc     >  2:838609/1‑140 (MQ=255)

                                                                                                                                            gt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTTCCAGAATCGAGAGCAGATCAGCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgcag   >  2:1361104/1‑140 (MQ=255)

                                                                                                                                            gt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgcag   >  2:3368273/1‑140 (MQ=255)

                                                                                                                                            gt‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgcag   >  1:57142/1‑140 (MQ=255)

GTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAT‑CT‑CTACCGGTACGGT‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACGCAGC  >  NZ_CP025268/3549120‑3549398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.