BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	780418 =	440 (0.650)	141 (0.210) +GG	36/270	8.5	23.9%	noncoding (1/76 nt)	CXP41_RS04110	tRNA‑Lys
*	?	NZ_CP025268	= 2525041	469 (0.690)	141 (0.210) +GG	36/270	8.5	23.9%	noncoding (76/76 nt)	CXP41_RS13255	tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 449 total aligned reads displayed.

ATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGG  >  NZ_CP025268/780280‑780557

aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                            <  1:4783714/140‑1 (MQ=255)

   gaagacAGATGTTAAGCGTGAAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  2:257309/6‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTACAGATTGGCCCCGAGTAAAATTCTTTCAGGTAACACAAGTATGGGTc                                                                                                                                         >  2:7979968/1‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  1:7983917/1‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  1:7653668/1‑140 (MQ=255)

     agacAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                                                       <  2:10170173/137‑1 (MQ=255)

     agacAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                                                       <  2:3774720/137‑1 (MQ=255)

         aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  2:2025062/140‑1 (MQ=255)

         aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  2:6423902/140‑1 (MQ=255)

         aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  1:5345572/140‑1 (MQ=255)

           aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                 <  2:5579910/140‑1 (MQ=255)

            tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                <  1:11624805/140‑1 (MQ=255)

            tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                <  2:6821279/140‑1 (MQ=255)

            tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                <  2:9377662/140‑1 (MQ=255)

            tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                <  2:10816052/140‑1 (MQ=255)

             gTTAACCGTGAAGGTTAACGTTGCGACAGCAAAGGCCCGTAAGTCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTACAGCTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAg                                                                                                                               <  1:3818159/140‑1 (MQ=25)

              ttAAGCGTGAAGGATAACGTTGCGCCAGCATCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                              <  2:1594536/140‑1 (MQ=255)

               tAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                             >  1:2309216/1‑140 (MQ=255)

                 aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACTCCCGTATGGGTCGTTAGCTCAGTTgg                                                                                                                           >  2:10719259/1‑140 (MQ=255)

                   cGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                                         <  2:6005176/140‑1 (MQ=255)

                    gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag                                                                                                                        <  2:4683366/140‑1 (MQ=255)

                     tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                       >  1:9456258/1‑140 (MQ=255)

                      gtaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                                      <  1:3084161/138‑1 (MQ=255)

                      gAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                                      <  1:9844032/140‑1 (MQ=255)

                       aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGTTTGGCCCCGAGTAAAAATCTTTCAGGTACCACACGTATGGGTCGATAGCTCAGTTGGTAGTGc                                                                                                                     >  1:2039894/1‑140 (MQ=25)

                          gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                  <  1:1928801/140‑1 (MQ=255)

                             aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                               >  2:581465/1‑140 (MQ=255)

                              aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                                                              <  1:6422197/140‑1 (MQ=255)

                                   gcgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                         <  2:1540681/140‑1 (MQ=255)

                                    cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTAAAAGATTGGCCCCGAGTACAATTCTTTCAGGTAACGCCCGTTGGGGTCGTGAGCTGAGTGGGTGGAGCTGATGACtttttg                                                                                                        >  1:10967873/1‑138 (MQ=21)

                                         gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGGGCAGTTGACTTTTAATCAAt                                                                                                   >  1:8408581/1‑140 (MQ=255)

                                          cAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACTTAAAGATTGGCCCCGAGTAAATATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                  >  2:9151948/1‑140 (MQ=255)

                                           aaCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                                                                 >  1:6144440/1‑140 (MQ=255)

                                                 ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                           <  1:8177970/140‑1 (MQ=255)

                                                      gggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                      <  2:11054031/140‑1 (MQ=255)

                                                        gcgagcgaAGCGAGTCATCCTGCACGACCCACCAAACTTAAATATTGGCCCCGAGTAAAAATCTATCAGGTAACACCCGTATGGGTCTTTAGCTCAGTTGGTAGAGCAGATGACTTTTAATCAATTGGTCGCTTGTTCGa                                                                                    >  2:3581103/1‑140 (MQ=37)

                                                         cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                   <  1:5643082/140‑1 (MQ=255)

                                                         cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                   <  1:10248972/140‑1 (MQ=255)

                                                         cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                   >  1:6901657/1‑140 (MQ=255)

                                                         cgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTGAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                   <  2:881090/140‑1 (MQ=255)

                                                         cgagcgaAGCGAGTCATCCTGCACGACCCACCAATATAACAGATTGGCGCCGCGGAAAAATGTTTCAGGAAACACCCGTATGGGTCGTTAGCTCTGTTGGTTGTGCAGTTGTCTGTTTATCTATTGGTCGCAGGTTCGaa                                                                                   >  1:8813704/1‑140 (MQ=25)

                                                         cgagcgaAGCGAGTCATCCTGCACGACACAACAATCTTAAAGTTTGGCCCCGAGTAAAAATCTTTCATGTAACTCCCGTTTGGTTCGTTAGATCAGTTGGTAGAGCAGTTGACTTTTAATCAATTTGTCTCAGGTTCGaa                                                                                   <  2:395229/140‑1 (MQ=25)

                                                          gagcgaAGCGAGACATCCTGCACGCCCCACCAATCTTAACGATTGGCCCCGAGTAAAAATCTTTCCGGTACCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATGGGTCGCAGGTTCGAAt                                                                                  <  1:7243314/140‑1 (MQ=37)

                                                           cgcgaagctaGTCAGCCTTCACGACCCACCAATCTAAATGAGTGGCCCCGAGTAAACATCTTTAATTAACCCCCCGAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATc                                                                                 <  2:2819637/139‑1 (MQ=18)

                                                           agcgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATc                                                                                 >  2:1031575/1‑140 (MQ=255)

                                                                agcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCGGAGTTATAATCTTTCAGGTAACACCCTTATGGTTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCTCTTGGTCGCCGGTTCGAATCCTGCa                                                                            <  1:2766756/140‑1 (MQ=25)

                                                                 gcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                           >  2:8256011/1‑140 (MQ=255)

                                                                        aTCCTGCACGCCACACCAATCATAAAGATTGGCACCGAGTAAATATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                    <  2:724089/140‑1 (MQ=21)

                                                                        aTCCTGCACGACCCACCAATCTTAACGATGGGCCCCGAGTAAAAATCTTGCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                    <  1:2935147/140‑1 (MQ=255)

                                                                        aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCAGGTAACAACCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                    <  2:4996076/140‑1 (MQ=255)

                                                                               aCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTa                                                             <  2:7632792/140‑1 (MQ=255)

                                                                                 gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                                                           <  1:7794746/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAATAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAGTTAAAgg                                                         >  1:6587679/1‑140 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  1:9171717/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         >  1:3411633/1‑140 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  2:5198238/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTGTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  1:7189969/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCAGTATGGGTCGTTAGCTGAGTTGGTATAGCAGTTGACTTTTAATCAATTGGTCGAAGGGTCGAATCCTGCACGACCAACCACTTTAAAgg                                                         >  1:5105022/1‑140 (MQ=25)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAACATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  2:7084147/140‑1 (MQ=255)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  2:1061514/140‑1 (MQ=255)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  1:1547585/140‑1 (MQ=255)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  1:8256012/140‑1 (MQ=255)

                                                                                      accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCTGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                >  1:10589558/1‑66 (MQ=255)

                                                                                      accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtgg                                                      >  1:7473134/1‑140 (MQ=255)

                                                                                      accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtgg                                                      >  2:2715705/1‑140 (MQ=255)

                                                                                       cctaTCATAAAGATTGTGTCCGAGTATATATCTTTCATGTAAGCCCAGTATGGGTAGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTATTCAATTGGTCGCAGGTTCGAATCCTGGACGACCCTGCAATTTAAAggtggt                                                     <  2:3140417/137‑1 (MQ=17)

                                                                                       ccaATCTTAACGATTGGCCCCGAGTTAATATCATTCAGGTACCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  2:9562299/140‑1 (MQ=21)

                                                                                       ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:9711365/140‑1 (MQ=255)

                                                                                       ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  2:5329068/140‑1 (MQ=255)

                                                                                       ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:6004404/140‑1 (MQ=255)

                                                                                       ccaATCATAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:10068760/140‑1 (MQ=255)

                                                                                         aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                   <  2:2309216/140‑1 (MQ=255)

                                                                                         aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTGGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                   <  1:4099123/140‑1 (MQ=255)

                                                                                           tCTTCATGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCTTAGGGGTCGTTAGCTCAGTTTGTAGTGCAGTTGACTTTTTTTCAATTGGTCTCAGGTTCTAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                 <  1:11251461/140‑1 (MQ=21)

                                                                                           tCTAAAAGATTGGCACCGAGTATATATCTTTCATGTAACCACCGTAAGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                 <  2:6317863/140‑1 (MQ=18)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTTACTgg                                               >  1:4249129/1‑140 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                               >  2:10056179/1‑140 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                               >  1:11169159/1‑140 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGAGGATACTgg                                               >  1:10868970/1‑140 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAACCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                               >  2:6534557/1‑140 (MQ=255)

                                                                                                aaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAGGTGGTTACTGGTag                                            >  2:10508357/1‑140 (MQ=255)

                                                                                                   aTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAgaga                                         <  1:2484299/140‑1 (MQ=255)

                                                                                                     tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTCGAGAAc                                       >  2:1255954/1‑140 (MQ=255)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                     >  1:3932924/1‑45 (MQ=255)

                                                                                                       gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                     <  1:3687871/140‑1 (MQ=255)

                                                                                                       gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTGACTGGTAGAGAACGt                                     >  2:2496664/1‑140 (MQ=255)

                                                                                                       gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                     >  1:10442664/1‑140 (MQ=255)

                                                                                                        ccccGAGTAAACATCATTCAGGTAACACCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  1:11442928/140‑1 (MQ=255)

                                                                                                        ccccGAGTAAAAATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  2:4243086/140‑1 (MQ=255)

                                                                                                        ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  1:6724545/140‑1 (MQ=255)

                                                                                                        ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  1:4574630/140‑1 (MQ=255)

                                                                                                                    aTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGtt                        <  2:8333672/140‑1 (MQ=255)

                                                                                                                             tcaaCACCCTCTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCa               <  2:11463986/138‑1 (MQ=255)

                                                                                                                             gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCa               <  1:2714933/140‑1 (MQ=255)

                                                                                                                                 cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCGACgg           >  1:1819098/1‑140 (MQ=255)

                                                                                                                                 cacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACgg           >  1:5162324/1‑140 (MQ=255)

                                                                                                                                       tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGaa     >  2:7489806/1‑140 (MQ=255)

                                                                                                                                        tcgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg    >  2:4960389/3‑140 (MQ=255)

                                                                                                                                        ccgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                  <  1:8654186/108‑1 (MQ=255)

                                                                                                                                          gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCCCCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg  <  1:10829837/140‑1 (MQ=255)

ATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGG  >  NZ_CP025268/780280‑780557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.