| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 2 (0.010) | 296 (1.010) +GCC |
92/268 | 0.2 | 99.3% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 2 (0.010) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 314 total aligned reads displayed.
GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACTTAGTCAATCAGACCTCCG‑CC‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTG > 1:4858480/1‑140 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCC < 1:5074650/140‑1 GCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCA < 1:2385655/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCAC < 1:4965319/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCAC < 1:1288172/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCAC > 1:5119362/1‑140 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCAC > 2:214356/1‑140 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCAC < 2:2750095/140‑1 GGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACC < 2:2825798/140‑1 GAAAACCACGAAGTACAGCAGGGTAAAGCACAACACAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCA < 1:3280421/140‑1 AACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACAC < 2:4892252/140‑1 AACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACAC < 1:1488872/140‑1 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCA < 1:2269388/140‑1 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCA < 2:4243951/140‑1 ACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAA < 1:2612608/140‑1 ACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAA < 2:3055523/140‑1 CGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAG < 1:1675476/140‑1 AAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAG < 2:2185267/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGA < 1:4219562/140‑1 TACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATA > 1:665663/1‑140 CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACA < 1:316172/140‑1 CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACA < 1:2962133/140‑1 GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACAC < 2:675493/122‑1 GTAAAGCACAGCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:3686317/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 1:4454420/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTTC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:1244136/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC < 2:579139/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:1744699/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:1771750/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCC < 2:105975/112‑1 AGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGAC > 1:3333632/1‑140 AGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGAC > 1:1550837/1‑140 AGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGAC > 2:1908950/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 1:1709994/1‑140 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 2:4514094/140‑1 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 2:5180292/1‑140 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATGGAGG > 2:1729828/1‑140 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACA < 1:2624183/134‑1 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACA > 2:2624183/1‑134 CCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGC < 1:1367792/140‑1 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGC > 2:3265311/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:4358488/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:2330617/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:3188668/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCC > 1:3862198/1‑97 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:1148611/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:194970/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:2418977/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:2033719/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:4571435/140‑1 CGATTTGGGTCAGCATCATAACCGCGTGGTTGCTGAACATCGGGATCCAGTTCTGC‑GGTAAAACCTAGTCAATCAGCCCCCAGCCC‑ATGTTGCCCACCACACCACAGCGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:2960791/140‑1 GATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCA < 2:820394/140‑1 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 2:3633994/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 2:1648588/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:2360055/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:223126/119‑1 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAACCCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 2:4034012/140‑1 TCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGT < 1:279720/140‑1 CAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTA > 1:737405/1‑140 GCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACC < 2:3932310/140‑1 CATCATATCCGCTTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCG > 2:4411720/1‑140 TCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GTTAAAACCTAGTCAATCACACCTCCG‑CCAATGTTGCCCACCACACCAACGAGTTACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCA < 2:2553862/140‑1 TATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAAC > 1:100066/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGCCCTCCTCCC‑ATGTTGCCCACCACACCAAAGAAATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA < 2:481880/140‑1 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:3877896/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCA < 2:2336977/132‑1 CGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAC > 2:4636137/1‑140 GTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACG < 2:1116075/140‑1 TGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGG > 1:3606988/1‑140 GGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGT > 2:884761/1‑140 GTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTG > 2:1704585/1‑140 GTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTG < 1:4418380/140‑1 TGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 1:4037054/140‑1 TGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 1:5054513/140‑1 GAACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGA > 1:4487320/1‑140 AACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAA < 1:4753055/140‑1 AACATCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAA < 1:3393748/140‑1 TCGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 1:3984962/140‑1 TCGGAATCCAGTTCTGC‑GGTAAAACATAGTCAATCGGACCTCCGCCC‑ATGTTGCCCAACACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 2:1982551/140‑1 CGGGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGA < 1:119457/140‑1 GGATCCAGTTTTGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCTCAAACAGCAACGGTGAAATGAACAGGAAG > 1:2683466/1‑140 TGC‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG < 1:4111482/140‑1 C‑GGTAAAACCTAGTCAATCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCG > 2:612517/1‑140 TCAATCAGACCTCCGCCC‑ATGTTGCCCGCCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACTGCAAACAGCAACGGTGAAATGAACAGG > 2:3819815/1‑111 TCAGACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC > 1:2716220/1‑140 TCAGACCTCCGCCC‑ATGTTGCCCACCACAACAAAGGGATACATTACGGTCGACATTGGGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC > 2:3365859/1‑140 ACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCA < 1:3800468/140‑1 ACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCA < 2:1482465/140‑1 ACCTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCA < 2:2288697/140‑1 CTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 1:920643/140‑1 CTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:3545493/140‑1 CTCCGCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:1225841/140‑1 cCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGT < 2:917515/139‑1 ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAA > 2:476090/1‑140 ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAA > 2:4206437/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG < 1:1648588/140‑1 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 1:2215739/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGGAAATGCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 2:2445850/1‑140 CCCACCACAACAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAACTGAACAGGAAGGTAAATTCCCGCGGTTCGGTAATTCCCACAAGCAGGGCGGTTAAGGTTGC > 2:1162705/1‑140 CCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > 1:4639297/1‑140 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGC‑GGTAAAACTTAGTCAATCAGACCTCCG‑CC‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |