BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	3242791 =	363 (1.210)	11 (0.040)	9/256	10.2	3.0%	coding (1209/1488 nt)	uxaA	altronate dehydratase
*	?	NZ_CP025268	3242853 =	369 (1.310)	11 (0.040)	9/256	10.2	3.0%	coding (1147/1488 nt)	uxaA	altronate dehydratase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 363 total aligned reads displayed.

ACTGACCCGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTG  >  NZ_CP025268/3242652‑3242929

aCTGACCCGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCAccc                                                                                                                                            >  2:3525174/1‑140 (MQ=255)

aCTGACCCGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCAccc                                                                                                                                            >  2:502128/1‑140 (MQ=255)

   gACCCGCGTCAAAGTCGATCCAGTGTTGTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCGGCCCGCACTCGcc                                                                                                                                         >  2:909104/1‑140 (MQ=255)

    aCCCGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCa                                                                                                                                        >  2:4175045/1‑140 (MQ=255)

      ccGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAgg                                                                                                                                      >  2:1181779/1‑140 (MQ=255)

      ccGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAgg                                                                                                                                      >  2:3396980/1‑140 (MQ=255)

         cgTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGgcg                                                                                                                                   >  1:2571765/1‑140 (MQ=255)

         cgTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATACGGCAGCCCGCACCCGCCAGGgcg                                                                                                                                   >  2:1808020/1‑140 (MQ=255)

           tCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCt                                                                                                                                 >  1:2252021/1‑140 (MQ=255)

              aaGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGt                                                                                                                              <  1:924051/140‑1 (MQ=255)

                   gATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTa                                                                                                                         <  2:15167/140‑1 (MQ=255)

                   cgtCCAGTCTGTTTTCTTCGCCGCCGCTGCACTGTTTCTGGTGATTTTCACCGCCGGCAGAACTCCCCCATACAGCGTACCACGACCCGTACTCAACCGCACGATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTa                                                                                                                         <  2:1205706/138‑1 (MQ=255)

                    aTCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTAc                                                                                                                        >  1:1726713/1‑140 (MQ=255)

                      ccAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACgg                                                                                                                      <  1:2293991/140‑1 (MQ=255)

                      ccAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACgg                                                                                                                      <  1:2330567/140‑1 (MQ=255)

                      ccAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACgg                                                                                                                      <  2:3569274/140‑1 (MQ=255)

                           gtTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCg                                                                                                                 >  1:3292307/1‑140 (MQ=255)

                               tttCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTAc                                                                                                             >  1:621122/1‑140 (MQ=255)

                                    tcGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGgc                                                                                                        >  2:1578222/1‑140 (MQ=255)

                                     cgccgcCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGgcg                                                                                                       <  2:2156762/140‑1 (MQ=255)

                                     cgccgcCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGgcg                                                                                                       <  2:3216530/140‑1 (MQ=255)

                                     cgccgaCAGTTCACTGTTGGTGGCGCTTTTCACCGTCGGCACACATCCCCCATACGGCGTGCCACGACCAGTACTGCACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGgcg                                                                                                       <  1:3203129/140‑1 (MQ=255)

                                        cgccAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCAc                                                                                                    <  1:1001823/140‑1 (MQ=255)

                                        cgccAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCAc                                                                                                    <  2:387271/140‑1 (MQ=255)

                                             gTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAAc                                                                                               >  1:5112067/1‑140 (MQ=255)

                                                  cTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGtt                                                                                          <  1:3759954/140‑1 (MQ=255)

                                                     ttGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAg                                                                                       >  1:47615/1‑140 (MQ=255)

                                                        gtggCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGccc                                                                                    >  2:3650471/1‑140 (MQ=255)

                                                        gtggCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGccc                                                                                    >  2:538337/1‑140 (MQ=255)

                                                                   cACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCgggtgcg                                                                         <  2:3824529/140‑7 (MQ=255)

                                                                       gTCGGCACACATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACg                                                                     <  1:1504105/140‑1 (MQ=255)

                                                                       gTCGGCACAAATCCACCATACGTCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTAGCTACGGCGTCGTTCCCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACg                                                                     <  2:2870719/140‑1 (MQ=255)

                                                                         cGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCt                                                                   >  2:1693490/1‑140 (MQ=255)

                                                                         cGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCt                                                                   <  1:1172557/140‑1 (MQ=255)

                                                                              caAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCg                                                              <  1:1247516/140‑1 (MQ=255)

                                                                                    caccaTACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACgc                                                        <  2:1930708/140‑1 (MQ=255)

                                                                                      ccaTACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACgcag                                                      >  1:4244619/1‑140 (MQ=255)

                                                                                               gTGCCACGACCAGTACTTAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAc                                             >  1:2512546/1‑140 (MQ=255)

                                                                                                tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                            >  1:3854717/1‑140 (MQ=255)

                                                                                                tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                            >  1:3996659/1‑140 (MQ=255)

                                                                                                 gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCt                                                                                                                                 >  1:4562765/1‑54 (MQ=255)

                                                                                                 gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCa                                           >  2:2198136/1‑140 (MQ=255)

                                                                                                 gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCa                                           >  1:1599625/1‑140 (MQ=255)

                                                                                                   cACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCacg                                         >  2:672823/1‑140 (MQ=255)

                                                                                                     cGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGACGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCacgac                                       >  1:4447218/1‑140 (MQ=255)

                                                                                                           gTACTGTACCGCACCAGATGGCATCCGGCACCCTCCAGGGATCTGGTCGCTACGGCATCGTTACGGGGCGCACTGAAGAGGTTGAGCCGGGGCGTTTTCAGACGCTCGCCGTGATGTAGCACGTCAAGCACGACGCTGGa                                 >  2:4429285/1‑140 (MQ=255)

                                                                                                           gTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGa                                 >  2:2832417/1‑140 (MQ=255)

                                                                                                           gTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGa                                 >  2:4385958/1‑140 (MQ=255)

                                                                                                               tGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAAccc                             <  2:4654612/140‑1 (MQ=255)

                                                                                                                 aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                           >  2:2435737/1‑140 (MQ=255)

                                                                                                                 aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                           >  1:1353472/1‑140 (MQ=255)

                                                                                                                 aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                           >  1:5148221/1‑140 (MQ=255)

                                                                                                                 aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                           >  1:1205998/1‑140 (MQ=255)

                                                                                                                    aGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTAACCGGCGCACTTAACAAGTGCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCttt                        <  1:4853898/140‑1 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCGTCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAAGGCAGCACGTCAACCACGACGCTGGAACCCGCTGTCt                      >  1:2817247/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGTCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:1367588/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:5084573/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:2694223/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:311199/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:5767/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:3956757/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:1046119/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:2969607/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:2989239/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:3050796/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:3118635/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:1125001/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:3602036/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:3675789/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      <  1:2210917/140‑1 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:3878052/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:4043810/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:4133229/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:2099739/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:1931830/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  1:762822/1‑140 (MQ=255)

                                                                                                                      cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTAGCCGTAACGCAGCACGTCAACCACGACGCTGCAACCCTCTTTCt                      >  2:3323435/1‑140 (MQ=255)

                                                                                                                      cACCATATGGAAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGGAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                      >  2:2070742/1‑140 (MQ=255)

                                                                                                                         cATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGTCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTGCTggg                   >  2:4579103/1‑140 (MQ=255)

                                                                                                                           tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                 >  2:2628519/1‑140 (MQ=255)

                                                                                                                           tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                 >  1:1848369/1‑140 (MQ=255)

                                                                                                                           tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                 >  1:2464359/1‑140 (MQ=255)

                                                                                                                           tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                 >  1:5026156/1‑140 (MQ=255)

                                                                                                                           tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                 >  1:1300153/1‑140 (MQ=255)

                                                                                                                             tGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAAAAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACa               <  1:3330745/140‑1 (MQ=255)

                                                                                                                                cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGATGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc            >  1:4342394/1‑140 (MQ=255)

                                                                                                                                cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc            >  1:2658353/1‑140 (MQ=255)

                                                                                                                                cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc            >  2:4247046/1‑140 (MQ=255)

                                                                                                                                cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc            >  2:2995628/1‑140 (MQ=255)

                                                                                                                                cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc            >  2:4951043/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGTCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTGCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTGTCTGGGTACATCCAAg         >  2:10523/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg         >  1:3400961/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg         >  2:2845930/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg         >  1:467733/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg         >  1:1460238/1‑140 (MQ=255)

                                                                                                                                   cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTGTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg         >  2:4792898/1‑140 (MQ=255)

                                                                                                                                    ccGCACGCGGCAGGGGGCTGGTCGCTCCGGCATTGTTACGCTGCGCACTGAAGAAGTACAGCGCTTGCGTGTTCAGACGCTCGCCGTAACGCAGCACTGGAACCACGACGCTGGAGTCTGGGTGCTGGGAAGAGCCAAga        >  2:416225/1‑139 (MQ=255)

                                                                                                                                     cGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTg       >  1:2718124/1‑140 (MQ=255)

                                                                                                                                     cGCACCCGCCAGGGCGCTGGTCGCTAAGGAATGGTTACACGGGGCACTTAACAAGATAAGCCGTGGCGTTTTAAGACGCCCACCGTAACGCAGCACGTCAACCACGACGCTGGAACACACTTTCTGGGTACAGCCAAGTg       >  2:2581372/1‑140 (MQ=255)

                                                                                                                                       cACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGAt     <  2:2022970/140‑1 (MQ=255)

ACTGACCCGCGTCAAAGTCGATCCAGTGTTTTTTCTTCGCCGCCAGTTCACTGTTGGTGGCGATTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTG  >  NZ_CP025268/3242652‑3242929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.