BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	3242791 =	363 (1.210)	11 (0.040)	9/256	10.2	3.0%	coding (1209/1488 nt)	uxaA	altronate dehydratase
*	?	NZ_CP025268	3242853 =	369 (1.310)	11 (0.040)	9/256	10.2	3.0%	coding (1147/1488 nt)	uxaA	altronate dehydratase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 396 total aligned reads displayed.

TTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCATAGATCGGC  >  NZ_CP025268/3242715‑3242989

        gTCGGCACACATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACg                                                                                                                                 <  1:1504105/140‑1 (MQ=255)

        gTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTCACCCGGCGCACCTAACAAGTTCAGCCCTGGCGTTTTCAGACg                                                                                                                                 <  1:1989054/140‑1 (MQ=255)

          cGGCACAAATCCACCATCCGGCGGGCCACGACCAGTACTGACCCGCACCATCTGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCt                                                                                                                               <  2:1929565/140‑1 (MQ=255)

          cGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACACGTTCAGCCCTGGCGTTTTCAGACGCt                                                                                                                               >  1:1101434/1‑140 (MQ=255)

               caAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCg                                                                                                                          <  2:279689/140‑1 (MQ=255)

                       ccaTACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACgcag                                                                                                                  >  1:4244619/1‑140 (MQ=255)

                         aTACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTTGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACgcagca                                                                                                                <  2:4344127/140‑1 (MQ=255)

                            cGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTAAGACGCTCGCCGTAACGCAGCACGt                                                                                                             >  2:3430475/1‑140 (MQ=255)

                               cGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCaa                                                                                                          >  1:955728/1‑140 (MQ=255)

                               cGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCaa                                                                                                          >  2:3046649/1‑140 (MQ=255)

                               cGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCCCGCCGTAACGCAGCACGTCaa                                                                                                          >  2:2599413/1‑140 (MQ=255)

                                gTGCCACGACCAGTACTTAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAc                                                                                                         >  1:2512546/1‑140 (MQ=255)

                                 tGCCGCGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGAGCTGGTCGCTACGGCATCATTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                                                                                        >  2:5049593/1‑140 (MQ=255)

                                 tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATTGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCATCACGTCAAcc                                                                                                        >  2:440206/1‑140 (MQ=255)

                                 tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                                                                                        >  1:3854717/1‑140 (MQ=255)

                                 tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                                                                                        >  1:4672740/1‑140 (MQ=255)

                                 tGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAAcc                                                                                                        >  1:1216187/1‑140 (MQ=255)

                                  gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCa                                                                                                       >  2:2955552/1‑140 (MQ=255)

                                  gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCa                                                                                                       >  1:2956616/1‑140 (MQ=255)

                                  gCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCa                                                                                                       >  2:2063781/1‑140 (MQ=255)

                                    cACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCacg                                                                                                     >  2:672823/1‑140 (MQ=255)

                                      cGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGACGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCacgac                                                                                                   >  1:4447218/1‑140 (MQ=255)

                                            gTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGa                                                                                             >  2:1394096/1‑140 (MQ=255)

                                            gTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGa                                                                                             >  1:1270162/1‑140 (MQ=255)

                                               cTGAACCGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAAcc                                                                                          <  2:463046/140‑1 (MQ=255)

                                                tGACCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAAccc                                                                                         <  2:4931623/140‑1 (MQ=255)

                                                tGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAAccc                                                                                         <  1:1861488/140‑1 (MQ=255)

                                                  aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                                                                                       >  2:2435737/1‑140 (MQ=255)

                                                  aaCAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGc                                                                                       >  2:3910663/1‑140 (MQ=255)

                                                     aGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCttt                                                                                    >  2:1183352/1‑140 (MQ=255)

                                                     aGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTAACCGGCGCACTTAACAAGTGCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCttt                                                                                    <  1:4853898/140‑1 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  2:1572704/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  2:1735916/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:762822/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  <  1:596038/140‑1 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  2:2667333/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  2:3247444/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:561241/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:2989222/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:1928209/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:3050796/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:3675789/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  1:2099739/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  <  1:2210917/140‑1 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGAAGCTGGAACCCGCTTTCt                                                                                  >  2:218310/1‑140 (MQ=255)

                                                       cACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTGCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCt                                                                                  >  2:2541400/1‑140 (MQ=255)

                                                          cATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTggg                                                                               <  1:3247444/140‑1 (MQ=255)

                                                            tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                                                                             <  1:3297347/140‑1 (MQ=255)

                                                            tatGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTa                                                                             <  1:1044977/140‑1 (MQ=255)

                                                               ggCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAg                                                                          >  1:2717534/1‑140 (MQ=255)

                                                                 cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGATGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc                                                                        >  1:4342394/1‑140 (MQ=255)

                                                                 cAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGcc                                                                        >  2:1135245/1‑140 (MQ=255)

                                                                   gCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCaa                                                                      <  1:2269710/140‑1 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGTTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTGTCTGGGTACAGCCAAg                                                                     >  1:2864396/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTTGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  1:1381217/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  2:2845930/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  2:1078097/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  2:3687450/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  1:1460238/1‑140 (MQ=255)

                                                                    cccGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTGTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAg                                                                     >  2:4792898/1‑140 (MQ=255)

                                                                      cGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTg                                                                   >  1:2451585/1‑140 (MQ=255)

                                                                      cGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTg                                                                   >  2:2131471/1‑140 (MQ=255)

                                                                        cACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGAt                                                                 >  1:3726298/1‑140 (MQ=255)

                                                                          cccGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGAttt                                                               <  1:4568017/140‑1 (MQ=255)

                                                                           ccGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTg                                                              <  1:4056103/140‑1 (MQ=255)

                                                                              ccAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCt                                                           <  2:2321225/140‑1 (MQ=255)

                                                                              ccAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCt                                                           >  2:3377/1‑140 (MQ=255)

                                                                              ccAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCt                                                           >  1:991034/1‑140 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  1:1313573/140‑1 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  2:561241/140‑1 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  1:1394701/140‑1 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  2:1271198/140‑1 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  1:345849/140‑1 (MQ=255)

                                                                                   gcgcTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCCGGCGTTTTCAGCCGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAAACCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAg                                                      <  2:4466984/140‑1 (MQ=255)

                                                                                       tGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGAttt                                                               >  1:2634194/1‑127 (MQ=255)

                                                                                       tGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGAttt                                                               <  2:2634194/127‑1 (MQ=255)

                                                                                             cTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATa                                            >  1:5197338/1‑140 (MQ=255)

                                                                                                  gCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATAccgcc                                       <  1:4499533/140‑1 (MQ=255)

                                                                                                   cATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATAccgccc                                      >  1:3384049/1‑140 (MQ=255)

                                                                                                      cGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCATACGATCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCCTTCTGGGTACAGCCAAGTGATGTGTCTACCAGCGTGGTGATACCGCCCGCt                                   <  1:3102510/140‑1 (MQ=255)

                                                                                                      cGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCt                                   >  2:352921/1‑140 (MQ=255)

                                                                                                      cGTTACCCGGCGCACTTAACAAGTTCAGCCCGGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCt                                   >  2:3981237/1‑140 (MQ=255)

                                                                                                        ttACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCttt                                 >  1:1560941/1‑140 (MQ=255)

                                                                                                          aCCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCGTTGt                               >  1:117697/1‑140 (MQ=255)

                                                                                                              ggCGCACTTAACCATCTCAGCCCTGGCGGTTTCAGACGCTCGACGTAACGCAGCACGTCGACCAGGACGCTGGAACCCGCTTTCGGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTCATACCGCCCGCTTGGTTccc                           <  2:891374/140‑1 (MQ=255)

                                                                                                                cgcACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCg                         >  1:1655643/1‑140 (MQ=255)

                                                                                                                cgcACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCg                         >  1:4716538/1‑140 (MQ=255)

                                                                                                                cgcACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCg                         >  2:4980551/1‑140 (MQ=255)

                                                                                                                cgcACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCg                         >  2:4183310/1‑140 (MQ=255)

                                                                                                                cgcACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCg                         >  1:5057080/1‑140 (MQ=255)

                                                                                                                    cTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGa                     <  2:1946321/140‑1 (MQ=255)

                                                                                                                      tAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATg                   <  1:4153960/140‑1 (MQ=255)

                                                                                                                        aCAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATggg                 <  1:404021/140‑1 (MQ=255)

                                                                                                                        aCAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGCGATACCGCCCGCTTTGTTCCCCGGCGATggg                 <  2:4043810/140‑1 (MQ=255)

                                                                                                                            gTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGtttt             <  1:1937213/140‑1 (MQ=255)

                                                                                                                               cAGCCCTGGCGTTTTCAGACGCTCGCCGTGAGGCAGCCCGTCAACAACGACGCTGGCACCGTCTTTCTGGGGACAGCCAAGTGTTTTGTCTTCCAGCGTGGTGATACCGCGCGCTTTGTTCCCCGGCGATGGGTTTTCAt          >  2:2395368/1‑140 (MQ=255)

                                                                                                                               cAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCAt          >  1:3967300/1‑140 (MQ=255)

                                                                                                                                  cccTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCATAGa       >  2:4155020/1‑140 (MQ=255)

                                                                                                                                       gCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCATAGATCGGc  >  1:2991252/1‑140 (MQ=255)

                                                                                                                                       gCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCATAGATCGGc  >  2:1677163/1‑140 (MQ=255)

TTTTCACCGTCGGCACAAATCCACCATACGGCGTGCCACGACCAGTACTGAACAGCACCATATGGCAGCCCGCACCCGCCAGGGCGCTGGTCGCTACGGCATCGTTACCCGGCGCACTTAACAAGTTCAGCCCTGGCGTTTTCAGACGCTCGCCGTAACGCAGCACGTCAACCACGACGCTGGAACCCGCTTTCTGGGTACAGCCAAGTGATTTGTCTTCCAGCGTGGTGATACCGCCCGCTTTGTTCCCCGGCGATGGGTTTTCATAGATCGGC  >  NZ_CP025268/3242715‑3242989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.