BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 3549238	402 (1.340)	58 (0.230) +TTTTTTAATGATACGGCGACC	24/232	5.0	15.2%	coding (1519/2085 nt)	malQ	4‑alpha‑glucanotransferase
*	?	NZ_CP025268	3549260 =	360 (1.200)	58 (0.230) +TTTTTTAATGATACGGCGACC	24/232	5.0	15.2%	coding (1497/2085 nt)	malQ	4‑alpha‑glucanotransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 451 total aligned reads displayed.

CGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATAC  >  NZ_CP025268/3549099‑3549377

cgcAGCGTTGGCCGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTAcc                                                                                                                                             >  2:5154226/1‑140 (MQ=255)

cgcAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTAcc                                                                                                                                             >  1:3682324/1‑140 (MQ=255)

cgcAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTAcc                                                                                                                                             >  1:1556118/1‑140 (MQ=255)

cgcAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTAcc                                                                                                                                             >  2:1870811/1‑140 (MQ=255)

  cAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACGGa                                                                                                                                           >  2:505235/1‑140 (MQ=255)

  cAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGa                                                                                                                                           >  1:4820482/1‑140 (MQ=255)

  cAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGa                                                                                                                                           >  2:424291/1‑140 (MQ=255)

      gTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAt                                                                                                                                       <  2:3996328/140‑1 (MQ=255)

      gTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAt                                                                                                                                       <  2:4602655/140‑1 (MQ=255)

      gTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAt                                                                                                                                       <  2:4518385/140‑1 (MQ=255)

       ttGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAAtc                                                                                                                                      <  1:785413/140‑1 (MQ=255)

            aGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTAc                                                                                                                                 <  2:3114216/140‑1 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              >  2:1932092/1‑140 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              >  2:2199213/1‑140 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              >  1:4955708/1‑140 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              >  1:2576952/1‑140 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              >  1:3720600/1‑140 (MQ=255)

               tCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcgg                                                                                                                              <  2:3773088/140‑1 (MQ=255)

                 aTGTGTCGCCGCCACCGCCATCGAGTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcggta                                                                                                                            <  2:749265/140‑1 (MQ=255)

                 aTGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcggta                                                                                                                            <  1:309747/140‑1 (MQ=255)

                 aTGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACcggta                                                                                                                            >  1:2105044/1‑140 (MQ=255)

                 aTGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGGGCACGGAACGTCTTCTCGTGGTCGTTTTCGTAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCACCTCACCGACAATCTCTACaggga                                                                                                                            >  2:3072482/1‑138 (MQ=255)

                        gccgcAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTAcc                                                                                                                     >  1:4882361/1‑140 (MQ=255)

                                  ccATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCa                                                                                                           <  1:3775447/140‑1 (MQ=255)

                                    aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCAcc                                                                                                         <  1:3397884/140‑1 (MQ=255)

                                      cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCaa                                                                                                       <  1:2296377/140‑1 (MQ=255)

                                      cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCaa                                                                                                       <  1:2677837/140‑1 (MQ=255)

                                       gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAAt                                                                                                      <  1:4708612/140‑1 (MQ=255)

                                       gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAAt                                                                                                      <  1:523024/140‑1 (MQ=255)

                                       gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAAt                                                                                                      <  1:3850349/140‑1 (MQ=255)

                                        aCTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGTCTTTCACGACCCGGAGGGCACCGAGATCTTCACCAATc                                                                                                     <  2:3848036/140‑1 (MQ=255)

                                         cTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCa                                                                                                    <  1:2823131/140‑1 (MQ=255)

                                            cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCa                                                                                                 >  2:343649/1‑140 (MQ=255)

                                            cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCa                                                                                                 <  1:142097/140‑1 (MQ=255)

                                            cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCa                                                                                                 <  1:454347/140‑1 (MQ=255)

                                            cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCa                                                                                                 <  1:1711849/140‑1 (MQ=255)

                                            cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCATGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCa                                                                                                 >  1:4173911/1‑140 (MQ=255)

                                                      gCTTTCGGTGCACGGAACGTCTTCTCGTGGGCGTTTTCGAAATAGAGCACTCTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCAGCATACAGAGAtc                                                                                       >  2:3663493/1‑139 (MQ=255)

                                                           cGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTAcc                                                                                                                     >  2:1467299/1‑105 (MQ=255)

                                                           cGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGtt                                                                                  >  1:3247032/1‑140 (MQ=255)

                                                             gTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTa                                                                                >  1:444391/1‑140 (MQ=255)

                                                                cACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACtt                                                                             >  1:4375902/1‑140 (MQ=255)

                                                                                   gTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCgaga                                                          >  2:1833309/1‑140 (MQ=255)

                                                                                     cGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCCGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGc                                                        <  2:2919329/140‑1 (MQ=255)

                                                                                       ttttCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAg                                                      >  1:3210934/1‑140 (MQ=255)

                                                                                        tttCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGTCTTTAATGACCCGGAGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGa                                                     <  2:3525769/140‑1 (MQ=255)

                                                                                        tttCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACTTTATTGACCCGGCCGCTACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGa                                                     <  2:2523480/140‑1 (MQ=255)

                                                                                          tCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCTTCTTTAATGATCCGGCCACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatc                                                   <  2:4464770/140‑1 (MQ=255)

                                                                                          tCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGTCTTTATCGACCCGGCGGCTACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatc                                                   <  2:163607/140‑1 (MQ=255)

                                                                                          tCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatc                                                   <  1:731032/140‑1 (MQ=255)

                                                                                            gAAATAGAGCGCTTTGTAAGAGTACACACCGATGCTGCGCAGCTTACCTACTTTCATGACAGGGCGGCCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                 <  2:1700963/140‑1 (MQ=255)

                                                                                            gAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                 <  1:839722/140‑1 (MQ=255)

                                                                                                  gagCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACTATCTCTACCGGTACGCTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCg                                           <  2:851710/140‑1 (MQ=255)

                                                                                                   agCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCgg                                          >  1:304477/1‑140 (MQ=255)

                                                                                                    gCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGa                                         <  1:2432787/140‑1 (MQ=255)

                                                                                                     cACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGTTTTTCACGATCCGTAGGCTACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGAt                                        <  2:127855/140‑1 (MQ=255)

                                                                                                      aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACCGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                       <  2:4303418/140‑1 (MQ=255)

                                                                                                      aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                       <  1:638478/140‑1 (MQ=255)

                                                                                                       cTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAg                                      <  1:1959213/140‑1 (MQ=255)

                                                                                                        tttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGt                                     >  1:3461156/1‑140 (MQ=255)

                                                                                                        tttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGt                                     >  2:1156097/1‑140 (MQ=255)

                                                                                                           gTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGaa                                  <  1:1886505/140‑1 (MQ=255)

                                                                                                               gagTACACCCCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGCATCGAGAGCAGATCATCCACCGGATAGTGAACATa                              <  1:4250194/140‑1 (MQ=255)

                                                                                                               gagTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCCGTACGGCACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATa                              <  2:2039397/140‑1 (MQ=255)

                                                                                                                  tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACa                                                                                             >  1:456580/1‑74 (MQ=255)

                                                                                                                  tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGCGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                           >  2:3551451/1‑140 (MQ=255)

                                                                                                                  tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATActc                           >  1:2711890/1‑138 (MQ=255)

                                                                                                                  tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                           >  2:1029811/1‑140 (MQ=255)

                                                                                                                  tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGACAGCAGATCATCCACCGGATAGTGAACATAcgc                           >  2:2739307/1‑140 (MQ=255)

                                                                                                                   ccacacCGCTGCTGCACAGCTTACCGACAATCTCTCCCCGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgcg                          <  2:1445193/139‑1 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTGCTTTCGAGTGCCCGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  2:649234/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  2:466208/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  1:1017071/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  1:3950921/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  1:4329215/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGCATAGCCAACATACgcgc                         >  2:1544431/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTGTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                         >  2:3903459/1‑140 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCGTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGAAGATCATCCATCGGATAGTGAACATAcgcac                         >  2:2272360/1‑138 (MQ=255)

                                                                                                                    cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGACATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCCAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGCGAACATACacgc                         >  2:4895884/1‑140 (MQ=255)

                                                                                                                     acacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCCATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGcc                        <  1:4147119/140‑1 (MQ=255)

                                                                                                                      cacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTCTCGAGCGCCAGAATCGAGAGCAGATCATCCACCGGAGAGTGAACATACGCGccc                       >  2:407397/1‑140 (MQ=255)

                                                                                                                         cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                    >  1:1740576/1‑140 (MQ=255)

                                                                                                                         cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                    >  1:4073505/1‑140 (MQ=255)

                                                                                                                         cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                    >  2:2657498/1‑140 (MQ=255)

                                                                                                                          gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAc                             >  1:3304248/1‑130 (MQ=255)

                                                                                                                          gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                   >  2:3270689/1‑140 (MQ=255)

                                                                                                                          gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                   >  2:3347642/1‑140 (MQ=255)

                                                                                                                          gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                   >  1:4908421/1‑140 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAAt                                                               >  2:1579111/1‑95 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAAt                                                               <  1:1579370/95‑1 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                  >  1:11723/1‑140 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                  >  1:920791/1‑140 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                  >  1:4636786/1‑140 (MQ=255)

                                                                                                                           ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                  >  1:5071681/1‑140 (MQ=255)

                                                                                                                            tgctgcGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                 >  1:1357623/1‑140 (MQ=255)

                                                                                                                            tgctgcGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                 >  2:318894/1‑140 (MQ=255)

                                                                                                                              ctgcGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGc               >  1:2967785/1‑140 (MQ=255)

                                                                                                                                   cAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                       <  1:1868606/111‑1 (MQ=255)

                                                                                                                                   cAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGACGACGTCTACTTTCGAGTGCCAGAATCGACCGCAGATCACCCACCGCAGAGTGAACATACGCGCACTGATCTGCCGtcc          >  2:4779603/1‑139 (MQ=255)

                                                                                                                                       ttACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGcc      <  1:3999374/140‑1 (MQ=255)

CGCAGCGTTGGCAGGTCATGTGTCGCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGGTACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATAC  >  NZ_CP025268/3549099‑3549377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.