BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	= 3549238	402 (1.340)	58 (0.230) +TTTTTTAATGATACGGCGACC	24/232	5.0	15.2%	coding (1519/2085 nt)	malQ	4‑alpha‑glucanotransferase
*	?	NZ_CP025268	3549260 =	360 (1.200)	58 (0.230) +TTTTTTAATGATACGGCGACC	24/232	5.0	15.2%	coding (1497/2085 nt)	malQ	4‑alpha‑glucanotransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 390 total aligned reads displayed.

GCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACGCAGCA  >  NZ_CP025268/3549123‑3549399

gccgcAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑Acc                                                                                                                                           >  1:4882361/1‑140 (MQ=255)

gccgcAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑Acc                                                                                                                                           >  2:5008517/1‑140 (MQ=255)

      aCCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATc                                                                                                                                     >  2:1699180/1‑140 (MQ=255)

       ccGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCt                                                                                                                                    <  1:708860/140‑1 (MQ=255)

          ccATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCa                                                                                                                                 <  1:3775447/140‑1 (MQ=255)

            aTCGACTGCTCCGGATATGCTTTCGGTGCACGGAACGTCTTATCGTGGTCGTTTTCGAAATAGAGCCCTTTGTAAGAGAACACACCGCTGCTGCGCAAATTAACGACACTCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCAcc                                                                                                                               <  1:2117392/140‑1 (MQ=255)

            aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACATTCATGACCCGTCCGC‑‑‑‑C‑‑‑‑ACCGAGATCTTCAcc                                                                                                                               <  2:3735425/140‑1 (MQ=255)

            aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCAcc                                                                                                                               <  1:3397884/140‑1 (MQ=255)

            aTCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCAcc                                                                                                                               <  1:3081367/140‑1 (MQ=255)

              cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCaa                                                                                                                             <  1:4538558/140‑1 (MQ=255)

              cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCaa                                                                                                                             <  1:2296377/140‑1 (MQ=255)

              cGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCaa                                                                                                                             <  1:993971/140‑1 (MQ=255)

               gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAAt                                                                                                                            <  1:1870811/140‑1 (MQ=255)

               gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAAt                                                                                                                            <  2:2057064/140‑1 (MQ=255)

               gACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAAt                                                                                                                            <  1:3862417/140‑1 (MQ=255)

                 cTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCa                                                                                                                          <  1:2823131/140‑1 (MQ=255)

                    cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                       <  1:1711982/140‑1 (MQ=255)

                    cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                       >  1:419546/1‑140 (MQ=255)

                    cTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCa                                                                                                                       <  1:1386946/140‑1 (MQ=255)

                           tACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCTTTTTTAATGATCCGTAGGC‑‑‑‑C‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCg                                                                                                                <  2:2597708/140‑1 (MQ=255)

                              gCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATg                                                                                                             >  2:658181/1‑140 (MQ=255)

                              gCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATg                                                                                                             >  1:400252/1‑140 (MQ=255)

                              gCTTTCGGTGCACGGAACGTCTTCTCGTGGGCGTTTTCGAAATAGAGCACTCTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCAGCATACAGAGAtc                                                                                                             >  2:3663493/1‑139 (MQ=255)

                                   cGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGtt                                                                                                        >  2:1563247/1‑140 (MQ=255)

                                   cGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGtt                                                                                                        >  1:3246638/1‑140 (MQ=255)

                                     gTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTa                                                                                                      >  1:444391/1‑140 (MQ=255)

                                        cACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACtt                                                                                                   >  1:4375902/1‑140 (MQ=255)

                                             aaCGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAg                                                                                              <  2:400252/140‑1 (MQ=255)

                                                  cttctCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCa                                                                                         >  2:136826/1‑140 (MQ=255)

                                                    tctcGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACGTTCGAGTGCCAGa                                                                                       >  2:1614750/1‑140 (MQ=255)

                                                       cGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATc                                                                                    >  2:4120968/1‑140 (MQ=255)

                                                            tCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGagag                                                                               <  1:4254986/140‑1 (MQ=255)

                                                             cGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCTTCTTTCACTACCCGGCCGC‑‑‑‑C‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGc                                                                              <  2:3450179/140‑1 (MQ=255)

                                                               ttttCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCAAGTGCCAGAATCGATAGCAg                                                                            >  2:4477071/1‑140 (MQ=255)

                                                                tttCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACTTTATTGACCCGGCCGC‑‑‑‑T‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGa                                                                           <  2:2523480/140‑1 (MQ=255)

                                                                    gAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                                       <  1:839722/140‑1 (MQ=255)

                                                                    gAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                                       <  1:1563977/140‑1 (MQ=255)

                                                                    gAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                                       <  1:3292986/140‑1 (MQ=255)

                                                                    gAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACC‑‑‑‑TTTTTTAATGATACGG‑‑‑‑CGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatcat                                                                       <  2:4412853/140‑1 (MQ=255)

                                                                    gAAATAGAGAACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCG‑‑‑‑TTTTTAATGATACGGCGACC‑‑‑‑ACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCTGAATCGAGAGCAGatcat                                                                       <  2:4545158/140‑1 (MQ=255)

                                                                       aTAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCa                                                                    <  2:1148315/140‑1 (MQ=255)

                                                                       aTAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCa                                                                    <  1:1644974/140‑1 (MQ=255)

                                                                           agCACTTTGTAATAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCgg                                                                <  1:745775/140‑1 (MQ=255)

                                                                           agCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCgg                                                                >  1:1887924/1‑140 (MQ=255)

                                                                           agCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGACCTTCACCACTCACCCTACAGCGAAGACCTTTACTTCCGAGTGCCAGAACCGAAAGCACAACATCCACCgg                                                                >  2:3526248/1‑140 (MQ=255)

                                                                             cACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGAt                                                              <  1:1331771/140‑1 (MQ=255)

                                                                              aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACCGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                             <  2:4303418/140‑1 (MQ=255)

                                                                              aCTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                             <  1:638478/140‑1 (MQ=255)

                                                                                tttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGatc                                                                         <  2:3317258/126‑1 (MQ=255)

                                                                                tttGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGt                                                           >  1:3461156/1‑140 (MQ=255)

                                                                                  tGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGa                                                         >  1:476776/1‑140 (MQ=255)

                                                                                         gTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcg                                                  >  1:1465439/1‑140 (MQ=255)

                                                                                         gTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcg                                                  <  1:2969898/140‑1 (MQ=255)

                                                                                          tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACa                                                                                                                   >  1:456580/1‑74 (MQ=255)

                                                                                          tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                                                 >  2:3551619/1‑140 (MQ=255)

                                                                                          tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                                                 >  1:3729066/1‑140 (MQ=255)

                                                                                          tACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATAcgc                                                 >  1:3158012/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCg                                                                                                                                          <  1:2757046/49‑1 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCTAGAGCAGATCAGCCACCGGATAGTGAACATACgcgc                                               >  2:2691250/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  1:1017071/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  2:1464951/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  2:466208/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  1:3950921/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  1:4329215/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  2:149929/1‑140 (MQ=255)

                                                                                            cacacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTGTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACgcgc                                               >  2:3903459/1‑140 (MQ=255)

                                                                                              cacCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGccc                                             >  1:4697054/1‑140 (MQ=255)

                                                                                                 cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                                          >  1:880960/1‑140 (MQ=255)

                                                                                                 cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                                          >  1:4073505/1‑140 (MQ=255)

                                                                                                 cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGa                                          >  1:2383969/1‑140 (MQ=255)

                                                                                                 cGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGCGCCAGAATCGAGAGCAGATCATCCACCCGATAGTGAACATACGCGCCCTGa                                          >  2:4623379/1‑140 (MQ=255)

                                                                                                  gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCCGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                         >  2:5170626/1‑140 (MQ=255)

                                                                                                  gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                         >  1:4908421/1‑140 (MQ=255)

                                                                                                  gctgctGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                         >  2:3270689/1‑140 (MQ=255)

                                                                                                  gctgctGCGCAGCTTACCGACAATATCGACCCGGACGG‑‑‑‑C‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAt                                         <  2:1804338/140‑1 (MQ=255)

                                                                                                   ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGGGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                        >  2:1268116/1‑140 (MQ=255)

                                                                                                   ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                        >  1:11723/1‑140 (MQ=255)

                                                                                                   ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                        >  1:5071681/1‑140 (MQ=255)

                                                                                                   ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                        >  1:1805096/1‑140 (MQ=255)

                                                                                                   ctgctgCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATc                                        >  2:2232687/1‑140 (MQ=255)

                                                                                                    tgctgcGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                                       >  2:318894/1‑140 (MQ=255)

                                                                                                    tgctgcGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                                       >  1:2692290/1‑140 (MQ=255)

                                                                                                    tgctgcGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCt                                       >  2:2949819/1‑140 (MQ=255)

                                                                                                      ctgcGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGc                                     >  1:2967700/1‑140 (MQ=255)

                                                                                                       tgcGCAGCTTACCGACCATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGAAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGcc                                    <  1:4151178/140‑1 (MQ=255)

                                                                                                         cgcAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGt                                  <  1:2657498/140‑1 (MQ=255)

                                                                                                          gcAGCTTACCGTCTTTCTTTATCCGGACGC‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtc                                 <  2:1989754/140‑1 (MQ=255)

                                                                                                          gcAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGtc                                 <  1:3324958/140‑1 (MQ=255)

                                                                                                           cAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATa                                                             >  2:1868606/1‑111 (MQ=255)

                                                                                                             gCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCg                              <  2:4891134/140‑1 (MQ=255)

                                                                                                             ccTTACCGACATTCTCTACCGGTACGC‑‑‑‑T‑‑‑‑ACCGAGAGCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCg                              <  2:2407077/139‑1 (MQ=255)

                                                                                                                  ccGACAATCTCTACCGGTACGG‑‑‑‑C‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATa                         <  1:5204759/140‑1 (MQ=255)

                                                                                                                   cGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATAc                        >  2:3843577/1‑140 (MQ=255)

                                                                                                                        aTCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTAt                   >  1:4714683/1‑140 (MQ=255)

                                                                                                                        aTCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTAt                   >  1:2491526/1‑140 (MQ=255)

                                                                                                                             tACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATccacc              >  1:1958108/1‑140 (MQ=255)

                                                                                                                                  gtacgg‑‑‑‑t‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGAGCTACCGCCTCGCCATACGGTATCCCCCACaaa         >  2:831930/1‑140 (MQ=255)

                                                                                                                                   tacgg‑‑‑‑t‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCa                                                                             >  2:3082441/1‑71 (MQ=255)

                                                                                                                                    acgg‑‑‑‑t‑‑‑‑acCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACg       <  2:2813155/140‑1 (MQ=255)

                                                                                                                                     cgg‑‑‑‑t‑‑‑‑acCGAGATCTTCACCAATCACCATACGGCGATGACGTTTCCTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACgc      >  2:4760588/1‑140 (MQ=255)

GCCGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTACCGACAATCTCTACCGGTACGG‑‑‑‑T‑‑‑‑ACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGATAGTGAACATACGCGCCCTGATCTGCCGTCTCGCCATACGGTATCCACCACAAACGCAGCA  >  NZ_CP025268/3549123‑3549399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.