| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP025268 | 262,011 | Δ34,307 bp | ykfI–intF | 46 genes ykfI, yafW, ykfH, ykfG, yafX, ykfF, CXP41_RS01315, CXP41_RS01320, CXP41_RS01325, CXP41_RS01330, yafZ, ykfA, perR, CXP41_RS01355, CXP41_RS01360, CXP41_RS01365, ykfC, CXP41_RS01385, mmuP, mmuM, fbpC, CXP41_RS01405, CXP41_RS01410, CXP41_RS01410, CXP41_RS01420, CXP41_RS01425, yagB, CXP41_RS24560, yagA, yagE, yagF, yagG, yagH, xynR, argF, argL, CXP41_RS01470, CXP41_RS01480, CXP41_RS01480, CXP41_RS01490, yagK, yagL, CXP41_RS01505, ykgV, CXP41_RS01515, intF |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP025268 | 262011 | 296317 | 34307 | 317 [0] | [4] 321 | ykfI–intF | ykfI,yafW,ykfH,ykfG,yafX,ykfF,CXP41_RS01315,CXP41_RS01320,CXP41_RS01325,CXP41_RS01330,yafZ,ykfA,perR,CXP41_RS01355,CXP41_RS01360,CXP41_RS01365,ykfC,CXP41_RS01385,mmuP,mmuM,fbpC,CXP41_RS01405,CXP41_RS01410,CXP41_RS01410,CXP41_RS01420,CXP41_RS01425,yagB,CXP41_RS24560,yagA,yagE,yagF,yagG,yagH,xynR,argF,argL,CXP41_RS01470,CXP41_RS01480,CXP41_RS01480,CXP41_RS01490,yagK,yagL,CXP41_RS01505,ykgV,CXP41_RS01515,intF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 262010 | 0 (0.000) | 167 (0.990) | 53/154 | 0.2 | 99.7% | intergenic (+11/+371) | CXP41_RS01280/ykfI | tRNA‑Thr/type IV toxin‑antitoxin system toxin YkfI |
| ? | NZ_CP025268 | 296318 = | 1 (0.010) | intergenic (‑170/+115) | intF/CXP41_RS01530 | integrase family protein/LysR substrate‑binding domain‑containing protein | |||||
Only 100 of 321 total aligned reads displayed.
CTATAACTTGGTGTTTTATAATATAAAGTATGTTGTTTTGATTGATTGCTCAAGTAGTTAAAAATGCATTAACATCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTGCCGCCATTCT > NZ_CP025268/296183‑296457 | tttaaccttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGtt < 2:3774631‑M2/5‑1 (MQ=255) accttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc < 1:2543203‑M2/9‑1 (MQ=255) accttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc > 2:2066077‑M2/132‑140 (MQ=255) accttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc > 2:4236749‑M2/132‑140 (MQ=255) accttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaagctcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc < 1:3190649‑M2/9‑1 (MQ=255) cttgtccaccgtgattcacgttcttgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgacacctattagcggcaccattaaaatcaaaGAGTTACCCCa < 1:2322133‑M2/11‑1 (MQ=255) cttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcttaggttcgactcctattatctgcaccattaaaacccaaGAGTTACCCCa < 2:3320741‑M2/11‑1 (MQ=255) cttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCa < 1:1135072‑M2/11‑1 (MQ=255) cttgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCa < 1:2475954‑M2/11‑1 (MQ=255) tgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatcgttcagttggtagagccgcgcattcgtaatgcgaaggtcgtaggttggcctcctcgtatcggcacgattaaaatcaaaGAGTGCCCCCata < 2:4682427‑M2/13‑1 (MQ=255) tgtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCata < 1:3839337‑M2/13‑1 (MQ=255) tgtccaccgtgattaacgttcgtgaatatgtcctttcagggccgatatagctccgttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCata < 2:1961684‑M2/13‑1 (MQ=255) gtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCatat > 1:1184590‑M2/127‑140 (MQ=255) gtccaccgtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCatat > 1:2597843‑M2/127‑140 (MQ=255) gtccaccgtgattcacgttcgtgaacatgtcctttcagggccgagatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCatat > 2:4360499‑M2/127‑140 (MQ=255) gtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATa < 1:172718‑M2/21‑1 (MQ=255) gtgattcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaAAGTTACCCCATATTTAAATa < 2:126357‑M2/21‑1 (MQ=255) attcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATacac > 1:573985‑M2/117‑140 (MQ=255) ttcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcacc < 2:4470757‑M2/25‑1 (MQ=255) ttcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcacc < 2:3179069‑M2/25‑1 (MQ=255) ttcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcacc < 2:5158105‑M2/25‑1 (MQ=255) ttcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcacc < 2:3676182‑M2/25‑1 (MQ=255) ttcacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcacc < 2:4611830‑M2/25‑1 (MQ=255) cacgttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATAcaccac < 1:3740060‑M2/27‑1 (MQ=255) gttcgtgaacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGtt < 1:5209388‑M2/30‑1 (MQ=255) tgaacctgtcctttcagcgccgatatagctcagttggtagagcagcgcattcgtaatgcgaacgtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTtcctc < 2:2808771‑M2/35‑1 (MQ=255) tgaacatgtcctttcacggccgatatagctcagttggtagagcagcgcactcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaatatcaaaGAGTTACCCCATATTTAAATACACCACGTTtcctc < 1:2877333‑M2/35‑1 (MQ=255) aacatgtcctttcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTcctcct < 1:5115501‑M2/37‑1 (MQ=255) catgtccttccagggccgatatagctcagttggtacagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCtgt > 1:1431546‑M2/102‑140 (MQ=255) gtcctttcaggggcgatgtagcttagttggtatagcagctcattcgggatgcgaaggtcgtagggtcgactgctattatcggcagcattaaaatcaaaGAGTTACCCCATATTTAAATGCACCGCGTTTCCTGCTGTGcc < 2:2591241‑M2/42‑1 (MQ=255) gtcctttcagggccgatatagctcagttggtagcgcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGcc > 2:3102086‑M2/99‑140 (MQ=255) tcagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTAttt > 1:4215131‑M2/93‑140 (MQ=255) cagggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTtg < 1:3227801‑M2/49‑1 (MQ=255) agggccgctatagctcagttggtagagcagcgcattgggaatgcgaaggtcgtaggttcgactcctattatcggcaccattaacatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTtgt < 2:1523327‑M2/50‑1 (MQ=255) gggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgcctcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTtgtg < 1:4035303‑M2/51‑1 (MQ=255) gggccgatatagctaagtgggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTtgtg < 1:4565951‑M2/51‑1 (MQ=255) ggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGc > 1:4389950‑M2/89‑140 (MQ=255) ggccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGc < 2:4542107‑M2/52‑1 (MQ=255) ccgatatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCa > 1:3554394‑M2/87‑140 (MQ=255) tatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGt < 1:3081360‑M2/58‑1 (MQ=255) tatagctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGt < 2:2219520‑M2/58‑1 (MQ=255) gctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAAcc > 2:2692231‑M2/79‑140 (MQ=255) gctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAAcc > 1:2940695‑M2/79‑140 (MQ=255) ctcagttggtagagcagcgcattcgtaatgctaaggtcgtaggttcgactccgattatctgcaccattaaaagcaaaGAGGTACCCCATATTTAAATACACCACGTTTCCTCCTGTACCGTATTGGTACCATTGTaactt > 1:1625823‑M2/78‑138 (MQ=255) ctcagttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCt > 2:911702‑M2/78‑140 (MQ=255) agttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTgg > 1:3719814‑M2/75‑140 (MQ=255) ttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCa > 1:4345113‑M2/73‑140 (MQ=255) ttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCa > 1:621011‑M2/73‑140 (MQ=255) ttggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCATCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCa > 1:846743‑M2/73‑140 (MQ=255) tggtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCaa < 1:3766047‑M2/69‑1 (MQ=255) gtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAAtt < 2:4193180‑M2/71‑1 (MQ=255) gtagagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAAtt < 2:1197380‑M2/71‑1 (MQ=255) agagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc > 1:4925312‑M2/68‑76 (MQ=255) agagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTAccc < 2:4925312‑M2/9‑1 (MQ=255) agagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATtca < 2:4874956‑M2/73‑1 (MQ=255) gagcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATtcat < 1:1082848‑M2/74‑1 (MQ=255) gcggcgccttcgtaatgcgaaggtcgtaggttcgacggctctgacaggcaccattaaaatcaaaGGGTTACCCCATAGTTAAATACACCACGTTTCCTCCTGTGCCGTAGTTGTCCCATTGTAACCTGGGCAattcataa > 2:774677‑M2/65‑138 (MQ=255) gcagcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATtcatca > 1:3339765‑M2/65‑140 (MQ=255) gcagcgcattcgtaatgcgaaggtcgtaggttcgactcctagtatcggcaccattaaaatcaacGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCCATtcatca > 2:1841947‑M2/65‑140 (MQ=255) gcgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCaaaa > 2:21259‑M2/62‑140 (MQ=255) cgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAAt > 2:1153032‑M2/61‑140 (MQ=255) cgcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAAt > 2:2360813‑M2/61‑140 (MQ=255) gcgttcttaatgcgaaggtcgtaggttcgactcctattataggcaccattaaaatcaaaGAGTTACCCCCTATTTAAATACACCACGTTTACTCCGGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCCAAATa < 2:1069061‑M2/81‑1 (MQ=255) gcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaacGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATa > 1:2660678‑M2/60‑140 (MQ=255) gcattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATa < 1:3260720‑M2/81‑1 (MQ=255) gcattcgtaatgcgaaggtcgtaggttcgactccgattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATa > 2:3875428‑M2/60‑140 (MQ=255) cattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTtgtg < 1:1378728‑M2/51‑1 (MQ=255) cattcgtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATAc > 1:3376212‑M2/59‑140 (MQ=255) gtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTc < 2:5041024‑M2/87‑1 (MQ=255) gtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTc < 2:1328927‑M2/87‑1 (MQ=255) gtaatgcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTc < 1:3951522‑M2/87‑1 (MQ=255) gcgaaggtcgtaggttcgccccctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACa < 2:4721087‑M2/92‑1 (MQ=255) gcgaaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACa < 2:370896‑M2/92‑1 (MQ=255) aaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGt > 2:4841899‑M2/46‑49 (MQ=255) aaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTtcctc < 1:2242878‑M2/35‑1 (MQ=255) aaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTTTAACCTTGGCCATTAATCAAAATACTGTTCTGACATCa > 2:2025903‑M2/46‑140 (MQ=255) aaggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCa < 2:3376212‑M2/95‑1 (MQ=255) ggtcgtaggttcgactcctattatcggcaccattaaactcgaaGAGTTACCCCATATTTAAATACACCCCGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCAGCAAAATACTGTTCTGACATCAgg < 1:1569300‑M2/97‑1 (MQ=255) ggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAgg < 1:1905261‑M2/97‑1 (MQ=255) ggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAgg < 1:2098598‑M2/97‑1 (MQ=255) ggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAgg < 1:1702783‑M2/97‑1 (MQ=255) ggtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGACGTATTTCTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAgg < 2:1662231‑M2/97‑1 (MQ=255) gtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGc > 1:4158116‑M2/43‑140 (MQ=255) gtcgtaggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGc < 1:3930109‑M2/98‑1 (MQ=255) taggttcgactcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAgtg > 1:3126218‑M2/39‑140 (MQ=255) actcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAgtgcaggtgca < 1:4891286‑M2/110‑1 (MQ=255) actcctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGACATTGTAACCTTGGCAATTCATCAAAATACTGATCTGACATCAGGCAgtgcaggtgca > 2:3432467‑M2/31‑140 (MQ=255) ctattatcggcaccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACa > 2:522116‑M2/27‑140 (MQ=255) caccattaaaatcaaaGCGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCaa > 1:3674579‑M2/17‑140 (MQ=255) caccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCaa > 1:1008520‑M2/17‑140 (MQ=255) caccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCaa > 2:5024009‑M2/17‑140 (MQ=255) cACCATTAACATCAAAGAGATACCCCATATTTAAATACACCACGCTTCCTCCTGTGCCGGATGTGAGCCATTGTAACCTTGCCAATTCATCAAAATACTGTTCCGACATCAGCCAGCGGAGGTCCCGACATTTAAGCCaa > 2:2279919/1‑140 (MQ=255) accattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACAACAGGCAGTGCAGGTGCAGACATTTAAGCCAAt > 1:787954‑M2/16‑140 (MQ=255) ccattaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGCCATTTCATCAAAATACTTTTCTGACATCAGGCATTGCAGGTGCAGACATTTAAGCAAAtt > 2:1016375‑M2/15‑140 (MQ=255) ttaaaatcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATtgct > 2:4024227‑M2/12‑140 (MQ=255) atcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTgccgc < 1:2790105‑M2/134‑1 (MQ=255) tcacaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCACTTCATCAAAATTCTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTgccgcc < 2:4305100‑M2/135‑1 (MQ=255) tcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCACCATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTgccgcc < 1:909425‑M2/135‑1 (MQ=255) tcaaaGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTgccgcc < 1:4463870‑M2/135‑1 (MQ=255) aGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTGCCGCCATTc > 1:4826716‑M2/2‑140 (MQ=255) | CTATAACTTGGTGTTTTATAATATAAAGTATGTTGTTTTGATTGATTGCTCAAGTAGTTAAAAATGCATTAACATCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAAGAGTTACCCCATATTTAAATACACCACGTTTCCTCCTGTGCCGTATTTGTGCCATTGTAACCTTGGCAATTCATCAAAATACTGTTCTGACATCAGGCAGTGCAGGTGCAGACATTTAAGCCAATTGCTGCCGCCATTCT > NZ_CP025268/296183‑296457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |