BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	695911 =	0 (0.000)	203 (0.740) +GAAGAAACAATC	40/250	2.9	62.4%	intergenic (‑33/+2)	CXP41_RS03680/CXP41_RS03685	tRNA‑Gln/tRNA‑Gln
*	?	NZ_CP025268	= 696182	268 (0.890)	203 (0.740) +GAAGAAACAATC	40/250	2.9	62.4%	intergenic (‑1/+379)	CXP41_RS03695/asnB	tRNA‑Met/asparagine synthase B

Only 100 of 472 total aligned reads displayed.

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

  tGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCCAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCCTc                                                                                                                                           >  1:4136213/1‑140 (MQ=255)

       cgcCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCttttt                                                                                                                                      <  1:263785/140‑1 (MQ=255)

            gAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTcg                                                                                                                                 <  1:3567489/140‑1 (MQ=255)

                       tGGTTCGTCTACCAATTTCGCCTCTCTAGCTAAAAAAGTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTAt                                                                                                                      <  2:5092668/140‑1 (MQ=21)

                       tGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTAt                                                                                                                      <  1:91955/140‑1 (MQ=255)

                         gTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCg                                                                                                                    >  1:4488022/1‑140 (MQ=255)

                         gTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGGAGCAATCTTTTTTTTCGCGATACCGTAttg                                                                                                                    >  1:3870771/1‑138 (MQ=255)

                          tGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCgg                                                                                                                   >  2:3573995/1‑140 (MQ=255)

                               cTACCAATTTCGCCCCTCCCGCCAAAAAACATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATCATGAGTCATGTGCCCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCCTTg                                                                                                              >  2:3543413/1‑140 (MQ=21)

                                  ccAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgg                                                                                                           <  1:111638/140‑1 (MQ=255)

                                   cAATTTCGCCTCTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCggg                                                                                                          <  1:456719/140‑1 (MQ=255)

                                   cAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCggg                                                                                                          <  1:424847/140‑1 (MQ=255)

                                    aaTTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg                                                                                                         <  1:2099669/140‑1 (MQ=255)

                                    aaTTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCgggg                                                                                                         <  2:3274649/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  2:3683925/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  1:4107592/140‑1 (MQ=255)

                                         cGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  1:1557858/140‑1 (MQ=255)

                                         cGCCACAACCGAAAATAAAGATGGTGGCTACGACGCGATTCGATCCTGTGCCCCCATAATTATGAGTGATGTGCTCTACCCAACTGAGCTACGTCGCCATCTACATTTTCGCGCTCCCTTATCGGCGTTGCGGGGCGCAt                                                                                                    <  1:2021613/140‑1 (MQ=18)

                                            cACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAt                                                                                                 <  1:3828330/140‑1 (MQ=255)

                                               tCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCg                                                                                              >  2:2900114/1‑140 (MQ=255)

                                                   gCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCGGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGtata                                                                                          <  1:723846/140‑1 (MQ=255)

                                                           atttggtggCTACGACGGGATTCGAGCCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTg                                                                                  <  2:3426246/137‑1 (MQ=255)

                                                             ctcgtggctaCGACGGGATTCGAACCTGTGCCCCCATCATTATGAGTGATGTGCTCTAACCAACTCAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaac                                                                                >  2:2449372‑M2/4‑79 (MQ=255)

                                                              tggtggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaacc                                                                               <  2:4819764‑M2/140‑63 (MQ=255)

                                                              tggtggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAAGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaacc                                                                               <  1:4341705‑M2/140‑63 (MQ=255)

                                                              tggtggCTACGACGGGATTCGAACCTGTGACACCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatgacttgggtacctggattcgaaccagggtatgccgggatcaataacc                                                                               <  2:1337915‑M2/140‑63 (MQ=255)

                                                               ggtggCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccg                                                                              >  1:2425957‑M2/1‑77 (MQ=255)

                                                                  ggCTACGCAGGGATTCGAACCTGTGACCCCATCATTATGAGTGAGGTGTTGTAACCAACTGAGTTACGTAGCCATGTTTTTGTTCGCGATACCTTATAGGCGTTCCGGGTCTCATTATGCGGAGATAGCCTAGCAGCggc                                                                           >  2:1219302/1‑138 (MQ=18)

                                                                            ggATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgct                                                                 >  1:3351827‑M2/1‑64 (MQ=255)

                                                                            ggATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgct                                                                 >  1:2967521‑M2/1‑64 (MQ=255)

                                                                            ggATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgct                                                                 >  1:3034425‑M2/1‑64 (MQ=255)

                                                                            ggATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgct                                                                 >  1:518502‑M2/1‑64 (MQ=255)

                                                                               ttCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCa                                                              >  1:1645157/1‑140 (MQ=255)

                                                                                 cGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcg                                                            >  1:5041677‑M2/1‑59 (MQ=255)

                                                                                  gAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctgcattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcga                                                           >  1:1436729‑M2/1‑58 (MQ=255)

                                                                                     ccTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgatac                                                        >  1:3437908‑M2/1‑55 (MQ=255)

                                                                                       tgtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAAt                                                      >  2:2672033/1‑140 (MQ=255)

                                                                                       tgtgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAAt                                                      >  2:2640087/1‑140 (MQ=255)

                                                                                         tgACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtggctgggttcgaaccagtgtatgcaggtagccataactggtgccttaccgcttgtcgagatccca                                                    <  2:2537280‑M2/140‑90 (MQ=255)

                                                                                                atcatTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtac                                             <  1:1038281‑M2/140‑97 (MQ=255)

                                                                                                   atTATGAGTGATGTGCACTAACCAACTGAGCTAGGTGGCAAgagtgtttcttcgatggctggggtacctggattcgaaccacggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaac                                          >  2:1454019‑M2/1‑41 (MQ=255)

                                                                                                    ttATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAATCTCTTTTTCAAGGAAAATTGCTCGAAAGTGa                                         <  2:4044567/140‑1 (MQ=255)

                                                                                                     tATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgc                                        <  1:672964‑M2/140‑102 (MQ=255)

                                                                                                      aTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTGCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTTACt                                       >  2:2850969/1‑140 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTCCGTAGCCATCTTTTTTTTCGCGATACCTTACCCGCGGTGCGGGGCGCCATATGCGTATGGGGCCTTGCAGCGTCAACCTCTTTTTCAAGGCAAATCGCTCGAAAGGGACTg                                      >  2:2164440/1‑140 (MQ=37)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctt                                      <  1:3422996‑M2/140‑104 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      >  2:874540/1‑140 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      <  2:411540/140‑1 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTg                                      <  1:5108231/140‑1 (MQ=255)

                                                                                                       tGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTAAGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAACTGCTCGAAAGTGACTg                                      >  1:2882715/1‑140 (MQ=255)

                                                                                                        gAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgcttt                                     >  1:3496190‑M2/1‑36 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATagag                                                                                       >  2:2386149/1‑89 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGtt                                    <  1:1348489/140‑1 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGtt                                    >  2:3056053/1‑140 (MQ=255)

                                                                                                         aGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGGTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCTTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTgct                                    >  2:791504/1‑138 (MQ=255)

                                                                                                          gTGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtccctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttct                                   <  1:1714524‑M2/140‑107 (MQ=255)

                                                                                                           tGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctg                                  <  1:4286969‑M2/140‑108 (MQ=255)

                                                                                                           tGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctg                                  <  1:820960‑M2/140‑108 (MQ=255)

                                                                                                           tGATGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctg                                  <  1:2700791‑M2/140‑108 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggt                                <  1:3598741‑M2/140‑110 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggt                                <  1:4651987‑M2/140‑110 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggagccgaaccaggtaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggt                                <  2:4339826‑M2/140‑110 (MQ=255)

                                                                                                             aTGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGt                                >  1:4904039/1‑140 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtg                               <  1:1921983‑M2/140‑111 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  1:2069669/140‑1 (MQ=255)

                                                                                                              tgtgCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGtt                               <  2:3218784/140‑1 (MQ=255)

                                                                                                                  ctctAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgcctgtatcaaaaaccggtgccttaccgctttgcgataccccatccgtacaacgctttctggtgaatt                           <  1:985129‑M2/140‑115 (MQ=255)

                                                                                                                   tctAACCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatgg                          <  1:2572955‑M2/140‑116 (MQ=255)

                                                                                                                     tAACCAACTGAGCTACGTAGCCAgcttgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgtttggcgataccccatccgtacaacgctttctggtgaatggtg                        <  2:1616775‑M2/140‑118 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcg                      <  1:530557‑M2/140‑120 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcg                      <  2:1888615‑M2/140‑120 (MQ=255)

                                                                                                                       aCCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGa                      >  1:4796230/1‑140 (MQ=255)

                                                                                                                        ccAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGaa                     <  2:3891239/140‑1 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggagg                 <  1:3170479‑M2/140‑125 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggagg                 <  2:723846‑M2/140‑125 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaac                                                                                >  1:2520074‑M2/1‑16 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGc                 >  2:294928/1‑140 (MQ=255)

                                                                                                                            cTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGc                 >  2:2095959/1‑140 (MQ=255)

                                                                                                                             ttaccTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:4262333/136‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:1714037/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:4645890/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  1:2369565/140‑1 (MQ=255)

                                                                                                                             tGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTCCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCg                <  2:4488022/140‑1 (MQ=255)

                                                                                                                               aGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTg              >  2:118894/1‑140 (MQ=255)

                                                                                                                                 cTACGTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgaga            <  1:693614‑M2/140‑130 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcggtggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        >  2:3782105‑M2/1‑7 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        >  1:1203267‑M2/1‑7 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        >  2:530050‑M2/1‑7 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        <  2:626573‑M2/140‑134 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        >  1:2247493‑M2/1‑7 (MQ=255)

                                                                                                                                     gTAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttg        >  2:3170479‑M2/1‑7 (MQ=255)

                                                                                                                                      tAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaacaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttga       <  1:3237056‑M2/140‑135 (MQ=255)

                                                                                                                                      tAGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttga       <  2:1760437‑M2/140‑135 (MQ=255)

                                                                                                                                      tAGCCAgattgtttcttcgatggctggggtaccaggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttga       >  2:2612070‑M2/1‑6 (MQ=255)

                                                                                                                                       aGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaa      >  2:4334580‑M2/1‑5 (MQ=255)

                                                                                                                                       aGCCAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaa      >  1:4990915‑M2/1‑5 (MQ=255)

                                                                                                                                         ccAgattgtttcttcgatggctggggtacctggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgcttggcgataccccatccgtacaacgctttctggtgaatggtgcgggaggcgagacttgaact    <  1:2781673‑M2/140‑138 (MQ=255)

                                                                                                                                         ccATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATAtt    >  1:3973686/1‑140 (MQ=255)

                                                                                                                                           agattgtttcttcgatagcttggggacgtggattcgaaccagggaatgccggtatcaaaaaccggtgccttaccgctcggcgataccccatacgtacaacgctatctgttgaatgttgcgggatgcaagacttgaactcg  <  2:2020672‑M2/140‑140 (MQ=255)

                                                                                                                                           aTCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCg  >  1:2925355/1‑140 (MQ=255)

CTTGCGGCGCCAGAACCTAAATCTGGTGCGTCTACCAATTTCGCCACTCCCGCAAAAAAAGATGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCATCTTTTTTTTCGCGATACCTTATCGGCGTTGCGGGGCGCATTATGCGTATAGAGCCTTGCAGCGTCAACCTCTTTTTCAAGGAAAATTGCTCGAAAGTGACTGTTTGGTTAGGTTGCGAACAGCGTGGCGCTATATTCG  >  NZ_CP025268/696043‑696321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.