| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 9 (0.030) | 309 (1.020) +GCC |
106/270 | 0.1 | 97.2% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 9 (0.030) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 328 total aligned reads displayed.
GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑CC‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTG > 2:3943136/1‑140 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCC > 2:2357048/1‑140 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCC > 2:5161805/1‑140 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCC < 1:3162210/140‑1 GCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCA < 2:3832504/140‑1 ctgatAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGCTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGGCCAC > 2:547332/6‑140 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCAC < 2:5054291/140‑1 AAACCACGAAGTACAGTAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACA > 1:1941782/1‑140 AACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACAC < 1:2449522/140‑1 aCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCA < 2:3994236/139‑1 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCA < 2:2261856/140‑1 CACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCCCACCAA < 2:1142886/140‑1 CACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAA < 2:1649929/140‑1 CGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAG < 1:2630550/140‑1 AAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAG < 1:574245/140‑1 GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGG > 1:1683233/1‑140 GTAAGGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 1:3603055/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:4360707/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:4953611/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:4538119/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:4213166/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:2901642/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC < 2:838794/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:4174240/1‑140 CACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:4830951/134‑1 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 2:4720907/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 1:896272/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 1:4685260/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 2:2242457/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 1:4398599/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 2:2113368/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGACGACATTGA > 1:3988570/1‑140 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAACCCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:1233987/140‑1 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 2:369807/140‑1 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 2:665223/140‑1 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTCAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:4878938/140‑1 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 2:3348921/1‑140 CCCAATGGCGATTTGGATCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 1:4027773/1‑140 CCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGC < 1:4803786/140‑1 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 2:2924591/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 2:888706/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:3952099/1‑140 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTGTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 1:1259398/1‑140 cgcTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:3582668/137‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC > 2:2450114/1‑140 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:5240801/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:1726063/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTGTTGCGGTAAAACCTCGTCAATCAGAACTCCTC‑CC‑ATGTTGCCCCCCACACCAAAGAGATACATTACGGTCGACATTGATGCCGCCAGC < 2:1040166/140‑1 CGATTTGCGTCAGCATCACATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAGCCTGGTCGAGCAGATCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACCTTGAGGCCGCCAGC < 2:365928/140‑1 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 2:1261190/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:2744066/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC < 1:4943016/140‑1 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 1:1505416/140‑1 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 1:757725/140‑1 GTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTG < 2:2719347/140‑1 CAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTA < 2:4572526/140‑1 CATCATATCCGCGTGGTTGCTGACCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑G‑CCAATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCTTGTACCG > 1:2144597/1‑140 TATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAAC > 1:105367/1‑140 ATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACA > 2:3138156/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCAGACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTAACGCAAACAGTAA > 2:1909532/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:2529695/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:4675381/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:716633/1‑140 CGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAC < 1:823414/140‑1 GTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACG > 1:5082813/1‑140 GTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTG < 2:356505/140‑1 taccGAACATCGGGATCCAGTCTTGCCGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCACAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 2:4091763/136‑1 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 1:2094025/140‑1 TCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG < 1:599791/140‑1 TCGGGATCCAGTTCTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGG > 2:775519/1‑140 CGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCCCACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGA < 1:2029285/140‑1 CGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGA < 1:1568173/140‑1 GGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAG > 1:2674686/1‑140 TCCAGTTTTGCTGTAAAACCTAGTAAATCAGACCTCC‑G‑CCTATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTA < 1:1359541/140‑1 TTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGGCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTC > 2:428913/1‑140 CGGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCG > 2:5086397/1‑140 GGTAAGACCTAGTTAATCAGACCTCCGG‑CC‑ATGTTGCCAACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCCACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:3511383/140‑1 GGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:1834400/140‑1 GGTAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACACTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:4455305/140‑1 TAAAACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTT < 2:3060085/140‑1 aaccTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 1:4721247/136‑1 AACCTAGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 1:2330822/140‑1 AGTCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATT < 1:3916847/140‑1 TCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCGAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCCCGGCGTGTGCCGCACACAGCAACGTTGAAATGACCAGCAAGTTAAATTCCAGCGGTTCGGTACTTCC > 2:3884608/1‑140 TCAATCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCC > 1:4537449/1‑140 TCAGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAAGGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACC > 2:5345280/1‑140 AGACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAG < 1:4119714/140‑1 ACCTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCA < 2:1005793/140‑1 CTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 1:36923/140‑1 CTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:5180759/140‑1 CTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:1563750/140‑1 CTCC‑GCCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 1:3722434/140‑1 cgcCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCG > 1:1391770/4‑140 cCC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAATGGTGAAAGGAACAGGAAGGTAAATTCCTGCGGTTCGGTAATTCCCACCAGCATGGCGGT > 1:2971306/2‑140 CC‑ATGTTGCCCACCACACCAAAGAAATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTT < 2:575239/140‑1 ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAA < 1:5161805/140‑1 GTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGTTTCGGTAATTCCCACCAGCATGGCGGTTAAGG > 1:3294570/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGACATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACAAGCATGGCGGTTAAGGTTG > 2:2404409/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 2:1462873/1‑140 CCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGC > 1:3523038/1‑140 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑CC‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |