| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 9 (0.030) | 309 (1.020) +GCC |
106/270 | 0.1 | 97.2% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 9 (0.030) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 332 total aligned reads displayed.
AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑‑‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG > NZ_CP025268/3864306‑3864578 | aGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGtt < 2:1160746/140‑1 (MQ=255)aGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGCATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGtt < 2:4198542/140‑1 (MQ=255) gtgtGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTg > 2:3943136‑M1/1‑139 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcc < 1:3518896‑M1/140‑4 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcc > 2:2357048‑M1/1‑137 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgccca < 2:1466250‑M1/140‑6 (MQ=255) ctgataaccacgAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGCTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTggccac > 2:547332‑M1/6‑134 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccac < 2:5054291‑M1/140‑7 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacac < 1:2011930‑M1/140‑12 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacac < 1:2449522‑M1/140‑12 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacac < 1:4294784‑M1/140‑12 (MQ=255) aCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacacc > 2:3583517‑M1/1‑128 (MQ=255) aCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGAGTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCAAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacacc > 1:416852‑M1/1‑128 (MQ=255) acaCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacacca < 2:3994236‑M1/139‑14 (MQ=255) cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaa < 1:5019366‑M1/140‑15 (MQ=255) cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaa > 2:5149338‑M1/1‑126 (MQ=255) cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaa > 1:2716907‑M1/1‑126 (MQ=255) aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagaga < 2:2252722‑M1/140‑20 (MQ=255) aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagaga > 1:5240801‑M1/1‑121 (MQ=255) aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagaga < 2:1259599‑M1/140‑20 (MQ=255) cagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacatta > 1:3930006‑M1/1‑114 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacgg > 2:158130‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacgg > 1:1761951‑M1/1‑111 (MQ=255) gTAAGGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggt < 1:3603055‑M1/140‑31 (MQ=255) gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggt < 2:2905809‑M1/140‑31 (MQ=255) gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggt < 2:4360707‑M1/140‑31 (MQ=255) tAAAGCACAACCCAATGTCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTATTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacgctc > 1:4785647‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtc < 2:838794‑M1/140‑32 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtc > 2:2624016‑M1/1‑109 (MQ=255) tAAAGCACAACACAATGGCGCTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAGCATCGGGATCCAGTCTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagctacactacggtc > 2:1665976‑M1/1‑109 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGAATCATAGCCGCGTGGTTGCTGAACATCGGGATCCAGTTGTGCGGTAAAACCTAGTCAAGCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagggatacattacgggcgag > 2:2129696‑M1/1‑106 (MQ=255) cacaACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggt < 2:4830951‑M1/134‑31 (MQ=255) aaacCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattg < 2:4524008‑M1/139‑39 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 2:3870854‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:1515614‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattga > 2:2039863‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggacgacattga > 1:3988570‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑G‑‑‑CCAATGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:4072814‑M1/1‑101 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 1:306493‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:665223‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:1816072‑M1/140‑41 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgagg > 2:3349024‑M1/1‑99 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgagg > 1:2131884‑M1/1‑99 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccac > 2:2386970‑M1/1‑99 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg > 1:2092574‑M1/1‑96 (MQ=255) aTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCTGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgc > 1:4577091‑M1/1‑95 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 2:888706‑M1/1‑94 (MQ=255) cGATTTGGGTCAGCATCATCTCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:3730183‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:2565752‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:3575437‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:5240801‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:39758‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTGTTGCGGTAAAACCTCGTCAATCAGAACTCCTC‑‑‑CC‑ATGTTgccccccacaccaaagagatacattacggtcgacattgatgccgccagc < 2:1040166‑M1/140‑50 (MQ=255) cGACTTGCGTCACCATCATAGCCGTGTGGTTGATTAGCAACTGGATCCAGTTTTGCGGTAAAAGCTAGTCTATCAGACCTCG‑GC‑‑CC‑ATGTTGACCACCACAACACTGAGATACATTAAGGTCGACATTGAGGCCGCCAGc < 2:227153/140‑1 (MQ=255) gATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagca < 1:731256‑M1/140‑51 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:1413259‑M1/1‑89 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:4510769‑M1/1‑89 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 1:757725‑M1/140‑53 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 2:2804108‑M1/140‑53 (MQ=255) tGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggc < 1:1241630‑M1/140‑55 (MQ=255) ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt < 1:2924591‑M1/140‑57 (MQ=255) cAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgta < 2:4572283‑M1/140‑60 (MQ=255) aGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtac > 2:129980‑M1/1‑80 (MQ=255) tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaac > 1:105367‑M1/1‑73 (MQ=255) tCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacag < 1:5160078‑M1/140‑70 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:1641750‑M1/1‑68 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 1:58747‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac < 1:823414‑M1/140‑74 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 1:4851155‑M1/1‑67 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 1:4920890‑M1/1‑63 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 2:2993690‑M1/1‑63 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 1:1270087‑M1/1‑63 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 2:4728477‑M1/1‑63 (MQ=255) ttGCTGAAAATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCGCC‑GCGCCCTTTGCC‑‑‑CACCACCCCAAAGACATACACTACGGTCGCAATTGAGGCCGCCAGCACGGCGTCTACCGCAAACAGCAACGGCGa > 2:3198553/1‑140 (MQ=255) taccgaacaTCGGGATCCAGTCTTGCCGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccacagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaa < 2:4091763‑M1/136‑80 (MQ=255) gAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatga > 1:4675542‑M1/1‑57 (MQ=255) tCGGGATCCAGTTCTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 2:775519‑M1/1‑52 (MQ=255) ccGGGATCCAGTTTTGCGGAAAAACCTAGTCAATCAGACCACC‑GC‑‑CC‑ATGTTGCCCACCACACCAAAGAAATACATTACGGTCGACACTGAGGCCGCCAGCACGGCGTGTAACGCAAACAGCAACGGTGAAATGAACAgg < 2:2497764/139‑1 (MQ=255) ggATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaag > 2:4950498‑M1/1‑49 (MQ=255) ggATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaag > 1:2674686‑M1/1‑49 (MQ=255) cGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcg > 2:367545‑M1/1‑36 (MQ=255) cGGTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcg > 2:5086397‑M1/1‑36 (MQ=255) ggTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 1:4455014‑M1/140‑106 (MQ=255) ggTAAAACCTAGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 1:3870854‑M1/140‑106 (MQ=255) aacctagtcAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 1:2330598‑M1/136‑111 (MQ=255) aGTCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaatt < 1:1914301‑M1/140‑116 (MQ=255) tCAATCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccgaagagatacattacggtcgacattgaggccgccagcccggcgtgtgccgcacacagcaacgttgaaatgaccagcaagttaaattccagcggttcggtacttcc > 2:3884608‑M1/1‑23 (MQ=255) tCAGACCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacc > 1:896542‑M1/1‑19 (MQ=255) aCCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 2:1005793‑M1/140‑126 (MQ=255) aCCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca > 1:4712009‑M1/1‑15 (MQ=255) aCCTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 2:3125957‑M1/140‑126 (MQ=255) ccTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcat > 1:3442754‑M1/1‑14 (MQ=255) cTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 2:5180759‑M1/140‑128 (MQ=255) cTCC‑GC‑‑CC‑ATGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:2508545‑M1/140‑128 (MQ=255) ccgccc‑atgtTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 1:3690311‑M1/5‑11 (MQ=255) gccc‑atGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcgg > 2:4241839‑M1/3‑9 (MQ=255) ctc‑atGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaacagcatggcggt < 2:5296217‑M1/138‑133 (MQ=255) cc‑ATGTTgcccaccacaccaaagaaatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtt < 2:575239‑M1/140‑134 (MQ=255) gTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggttaagg > 1:1364434‑M1/1‑3 (MQ=255) gTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggttaagg > 1:3294454‑M1/1‑3 (MQ=255) | AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑‑‑CC‑ATGTT‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG > NZ_CP025268/3864306‑3864578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |