Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 2,896,268 +CAC coding (42/258 nt) ygcO → ferredoxin family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 28962685 (0.020)387 (1.270)
+CAC
112/270 0.0 98.8% coding (42/258 nt) ygcO ferredoxin family protein
?NZ_CP025268 2896269 = 5 (0.020)coding (43/258 nt) ygcO ferredoxin family protein

Only 100 of 395 total aligned reads displayed.

GGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896129‑2896407
                                                                                                                                           |                                                                                                                                           
   gATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcac                                                                                                                                          <  1:1208816‑M1/140‑4 (MQ=255)
    aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcaca                                                                                                                                         >  1:3316326‑M1/1‑136 (MQ=255)
    aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcaca                                                                                                                                         <  1:5228717‑M1/140‑5 (MQ=255)
    aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcaca                                                                                                                                         <  2:1383902‑M1/140‑5 (MQ=255)
    aTAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcaca                                                                                                                                         >  2:754295‑M1/1‑136 (MQ=255)
        aCCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgt                                                                                                                                     >  1:4223964‑M1/1‑132 (MQ=255)
         ccTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgtt                                                                                                                                    <  1:4492065‑M1/140‑10 (MQ=255)
          cTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttc                                                                                                                                   >  2:1700613‑M1/1‑130 (MQ=255)
            gTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccg                                                                                                                                 >  2:2705817‑M1/1‑128 (MQ=255)
              tCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggc                                                                                                                               >  1:1245938‑M1/1‑126 (MQ=255)
              tCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggc                                                                                                                               >  1:2721828‑M1/1‑126 (MQ=255)
                 cccgCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctga                                                                                                                            <  1:4072048‑M1/139‑18 (MQ=255)
                 aCCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctga                                                                                                                            <  2:1575857‑M1/140‑18 (MQ=255)
                  ccGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgac                                                                                                                           >  1:375106‑M1/1‑122 (MQ=255)
                   cGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgact                                                                                                                          >  1:1537163‑M1/1‑121 (MQ=255)
                   cGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgact                                                                                                                          >  1:3952449‑M1/1‑121 (MQ=255)
                       gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgt                                                                                                                      >  1:3510278‑M1/1‑117 (MQ=255)
                       gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgt                                                                                                                      >  1:5086988‑M1/1‑117 (MQ=255)
                       gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgt                                                                                                                      >  2:3973227‑M1/1‑117 (MQ=255)
                       gcgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgt                                                                                                                      >  2:3417414‑M1/1‑117 (MQ=255)
                        cgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgtt                                                                                                                     <  1:2538988‑M1/140‑25 (MQ=255)
                        cgcCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgtt                                                                                                                     <  2:2206716‑M1/140‑25 (MQ=255)
                           cAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgag                                                                                                                  <  1:978113‑M1/140‑28 (MQ=255)
                             gTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcg                                                                                                                >  2:3372827‑M1/1‑111 (MQ=255)
                                  tCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccaga                                                                                                           >  2:2451181‑M1/1‑106 (MQ=255)
                                      gCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggc                                                                                                       >  2:29479‑M1/1‑102 (MQ=255)
                                        atcatTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcag                                                                                                     >  1:2335237‑M1/1‑100 (MQ=255)
                                             ttACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacgggagaacgg                                                                                                <  2:4235408‑M1/140‑46 (MQ=255)
                                             ttACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacgg                                                                                                <  2:1991492‑M1/140‑46 (MQ=255)
                                              tACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggt                                                                                               <  1:15680‑M1/140‑47 (MQ=255)
                                              tACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggt                                                                                               <  1:688127‑M1/140‑47 (MQ=255)
                                              tACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggt                                                                                               <  2:1807082‑M1/140‑47 (MQ=255)
                                              tACGTCGTCACGGCATGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggt                                                                                               <  1:2833806‑M1/140‑47 (MQ=255)
                                                   cgtcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgatt                                                                                          >  2:1296797‑M1/1‑89 (MQ=255)
                                                    gtcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgatta                                                                                         >  1:1681848‑M1/1‑88 (MQ=255)
                                                     tcACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTTCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaa                                                                                        >  1:1596548‑M1/1‑87 (MQ=255)
                                                      cACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaac                                                                                       <  2:2863687‑M1/140‑55 (MQ=255)
                                                        cGGCCTGTGGCATCTGGCGGGCGCTATTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgc                                                                                     <  2:4846734‑M1/140‑57 (MQ=255)
                                                        cGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgc                                                                                     <  1:3606274‑M1/140‑57 (MQ=255)
                                                        cGGCCTGTGGCAACTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttaattaacgc                                                                                     <  2:3783664‑M1/140‑57 (MQ=255)
                                                               tgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGCTGCGCCGcacattgttccggctgactccgttgagcgcccgacggccgaacggttgattaacgcctgtccg                                                                              >  2:4541920‑M1/1‑77 (MQ=255)
                                                               tgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccg                                                                              >  1:2475299‑M1/1‑77 (MQ=255)
                                                               tgGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccg                                                                              >  1:2912515‑M1/1‑77 (MQ=255)
                                                                    tCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcagg                                                                         >  1:3867257‑M1/1‑72 (MQ=255)
                                                                       ggcgggcgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtct                                                                      >  1:2122445‑M1/1‑69 (MQ=255)
                                                                       ggcgggcgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtct                                                                      >  1:806504‑M1/1‑69 (MQ=255)
                                                                           ggcgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttt                                                                  >  1:2926989‑M1/1‑65 (MQ=255)
                                                                           ggcgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttt                                                                  >  2:1614853‑M1/1‑65 (MQ=255)
                                                                           ggcgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttt                                                                  <  1:4896056‑M1/140‑76 (MQ=255)
                                                                             cgATGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttc                                                                >  1:4944469‑M1/1‑63 (MQ=255)
                                                                               aTGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgc                                                              >  2:555748‑M1/1‑61 (MQ=255)
                                                                                tGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgct                                                             <  1:1038990‑M1/140‑81 (MQ=255)
                                                                                tGTTATCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCAGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgct                                                             <  1:4418384‑M1/140‑81 (MQ=255)
                                                                                     tCAGGAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacac                                                        <  2:3906123‑M1/140‑86 (MQ=255)
                                                                                        ggAGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccgg                                                     >  1:4324630‑M1/1‑52 (MQ=255)
                                                                                          aGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaa                                                   >  2:4964417‑M1/1‑50 (MQ=255)
                                                                                          aGTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTAATGCGCCGcacattgttccggctgactccgttgagcgcaagacggcagaacggttgattaacgcctgtccggcagctctttcttcgctcacaccggaa                                                   >  1:2955670‑M1/1‑50 (MQ=255)
                                                                                           gTCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaag                                                  <  2:3692508‑M1/140‑92 (MQ=255)
                                                                                            tCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaagg                                                 >  2:2504879‑M1/1‑48 (MQ=255)
                                                                                            tCTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcagggcttttttcgctcacaccggaagg                                                 >  2:3211719‑M1/1‑48 (MQ=255)
                                                                                             cTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggt                                                <  2:3510278‑M1/140‑94 (MQ=255)
                                                                                             cTGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggt                                                <  1:3428483‑M1/140‑94 (MQ=255)
                                                                                              tGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgtggagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggta                                               >  1:5356052‑M1/1‑46 (MQ=255)
                                                                                              tGCGATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgtaccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggta                                               >  2:4686735‑M1/1‑46 (MQ=255)
                                                                                                  aTGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaactt                                           <  1:1011271‑M1/140‑99 (MQ=255)
                                                                                                   tGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaactta                                          >  1:4259734‑M1/1‑41 (MQ=255)
                                                                                                    gTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttac                                         >  2:4416579‑M1/1‑40 (MQ=255)
                                                                                                       tGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgta                                      <  1:633313‑M1/140‑104 (MQ=255)
                                                                                                       tGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgta                                      >  1:1736355‑M1/1‑37 (MQ=255)
                                                                                                       tGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgta                                      <  2:123943‑M1/140‑104 (MQ=255)
                                                                                                         tagcccgtaATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtatt                                    <  2:4053448‑M1/137‑106 (MQ=255)
                                                                                                         tagcccgtaATCTCTCGCGCGTTGCTGATGCCCCGcacattgttccggccgcctccgttgagcgccagacggcagaacgcttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaccttacgtatt                                    <  2:4155477‑M1/137‑106 (MQ=255)
                                                                                                            cccGTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgac                                 <  2:693315‑M1/140‑109 (MQ=255)
                                                                                                               gTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactat                              >  1:4173459‑M1/1‑29 (MQ=255)
                                                                                                               gTAATCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttccctcacaccggaaggtaacttacgtattgactat                              >  2:939295‑M1/1‑29 (MQ=255)
                                                                                                                 aaTCTCTGGCGCGTTGCTGATGCGCCGcaccttgttccggctgactccattgcgcgccagacggcagaacggttgattaacgcctgtccggccggtcttttttcgctcacaccggaaggtaacttacgtattgaatatcg                            >  1:771336‑M1/1‑27 (MQ=255)
                                                                                                                 aaTCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcg                            >  1:2269627‑M1/1‑27 (MQ=255)
                                                                                                                 aaTCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcg                            <  1:2675587‑M1/140‑114 (MQ=255)
                                                                                                                 aaTCTCTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcg                            <  1:252495‑M1/140‑114 (MQ=255)
                                                                                                                   tctcTGGCGCGTTTCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  2:4645507‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGGCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  1:1353070‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcc                          <  2:5179324‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  2:1455205‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  2:476404‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  1:1847563‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  2:1123138‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  1:1400805‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  1:4677887‑M1/140‑116 (MQ=255)
                                                                                                                   tctcTGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgca                          <  1:4742218‑M1/140‑116 (MQ=255)
                                                                                                                    ctctGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcag                         <  2:2111896‑M1/140‑117 (MQ=255)
                                                                                                                     tctGGCGCGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagt                        <  1:3722381‑M1/140‑118 (MQ=255)
                                                                                                                         gcgcGTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcc                    >  2:2305338‑M1/1‑19 (MQ=255)
                                                                                                                           gcgTTGCTGATGCGACGcacattgttccggctgactcagttgagcgccagacggcagaccggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagtggcctg                  <  2:3292770‑M1/140‑124 (MQ=255)
                                                                                                                           gcgTTGCTCATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtcttgactatcgcagttgcctg                  <  2:5067395‑M1/140‑124 (MQ=255)
                                                                                                                            cgTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctgg                 <  1:1629780‑M1/140‑125 (MQ=255)
                                                                                                                            cgTTGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctgg                 >  1:3806188‑M1/1‑16 (MQ=255)
                                                                                                                              ttGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctggag               <  1:2017310‑M1/140‑127 (MQ=255)
                                                                                                                              ttGCTGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctggag               >  1:5013256‑M1/1‑14 (MQ=255)
                                                                                                                                  tGATGCGCCGcacattgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcttttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctggagtgtg           <  2:3612769‑M1/140‑131 (MQ=255)
                                                                                                                                           gcacgttgttccggctgactccgttgagcgccagacggcagaacggttgattaacgcctgtccggcaggtcctttttcgctcacaccggaaggtaacttacgtattgactatcgcagttgcctggagtgtggcacctgcc  >  2:4924611‑M1/1‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
GGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCGATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896129‑2896407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.