Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 2,896,268 +CAC coding (42/258 nt) ygcO → ferredoxin family protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 28962685 (0.020)387 (1.270)
+CAC
112/270 0.0 98.8% coding (42/258 nt) ygcO ferredoxin family protein
?NZ_CP025268 2896269 = 5 (0.020)coding (43/258 nt) ygcO ferredoxin family protein

Only 100 of 396 total aligned reads displayed.

ATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCG‑‑‑ATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896133‑2896407
                                                                                                                                           |                                                                                                                                          
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            >  1:3316326‑M2/140‑140 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            <  2:3992562‑M2/1‑1 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            >  2:754295‑M2/140‑140 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            <  1:5228717‑M2/1‑1 (MQ=255)
ataaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcaca                                                                                                                                            <  1:1640433‑M2/1‑1 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                           >  2:1489063‑M2/139‑140 (MQ=255)
 taaacctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacAt                                                                                                                                           <  1:4521112‑M2/2‑1 (MQ=255)
    acctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGt                                                                                                                                        >  1:4223964‑M2/136‑140 (MQ=255)
     cctgttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGtt                                                                                                                                       <  1:1355201‑M2/6‑1 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgcggcacATTGttcag                                                                                                                                    >  1:2788733‑M2/132‑138 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    >  1:1578099‑M2/132‑140 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    <  1:1556958‑M2/9‑1 (MQ=255)
        gttccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCg                                                                                                                                    >  2:2887703‑M2/132‑140 (MQ=255)
          tccaccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGc                                                                                                                                  >  1:1221777‑M2/130‑140 (MQ=255)
             cccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGa                                                                                                                               <  1:4072048‑M2/14‑1 (MQ=255)
              ccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgttgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGAc                                                                                                                              >  1:2945664‑M2/126‑140 (MQ=255)
              ccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGAc                                                                                                                              >  2:1580320‑M2/126‑140 (MQ=255)
              ccgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGAc                                                                                                                              >  1:375106‑M2/126‑140 (MQ=255)
               cgctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACt                                                                                                                             >  1:3952449‑M2/125‑140 (MQ=255)
                gctgcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTc                                                                                                                            >  1:4684358‑M2/124‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                         >  1:3510278‑M2/121‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                         >  2:3417414‑M2/121‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                         >  2:2525840‑M2/121‑140 (MQ=255)
                   gcgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGt                                                                                                                         >  1:5086988‑M2/121‑140 (MQ=255)
                    cgccagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGtt                                                                                                                        <  1:2858214‑M2/21‑1 (MQ=255)
                       cagttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAg                                                                                                                     <  1:978113‑M2/24‑1 (MQ=255)
                         gttattctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAgcg                                                                                                                   >  2:3372834‑M2/115‑140 (MQ=255)
                              tctggcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatggctgtagcccgtaatctcttgcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCCGa                                                                                                              >  2:2451200‑M2/110‑140 (MQ=255)
                                  gcatcatttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACCCCGTTGAGCGCCAGACGGc                                                                                                          >  1:2407325‑M2/106‑140 (MQ=255)
                                      catttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGaa                                                                                                      <  1:1255247‑M2/39‑1 (MQ=255)
                                         ttacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGGAGAACgg                                                                                                   <  2:4235408‑M2/42‑1 (MQ=255)
                                          tacgtcgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGt                                                                                                  <  1:687852‑M2/43‑1 (MQ=255)
                                               cgtcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGAtt                                                                                             <  1:2690176‑M2/48‑1 (MQ=255)
                                                 tcacggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTaa                                                                                           >  1:788450‑M2/91‑140 (MQ=255)
                                                    cggcctgtggcatctggcgggcgctattatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGc                                                                                        <  2:4846734‑M2/53‑1 (MQ=255)
                                                    cggcctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGc                                                                                        <  1:3606274‑M2/53‑1 (MQ=255)
                                                    cggcctgtggcaactggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTAATTAACGc                                                                                        <  2:3783664‑M2/53‑1 (MQ=255)
                                                       cctgtggcctctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgcggatgcgccgcacATTGTTCCGGCTGACGCCGTTGAGCGCCAGACGGCCGAACGGTTTATTAACGCCTg                                                                                     >  1:2028348‑M2/85‑140 (MQ=255)
                                                       cctgtggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTg                                                                                     <  1:2503737‑M2/56‑1 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgctgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCCGACGGCCGAACGGTTGATTAACGCCTGTCCg                                                                                 >  2:4541920‑M2/81‑140 (MQ=255)
                                                           tggcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCg                                                                                 >  2:2997624‑M2/81‑140 (MQ=255)
                                                             gcatctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGc                                                                               <  2:3316326‑M2/62‑1 (MQ=255)
                                                                tctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAgg                                                                            >  1:3867257‑M2/76‑140 (MQ=255)
                                                                 ctggcgggcgatgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGt                                                                           >  1:4770733‑M2/75‑140 (MQ=255)
                                                                           atgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGc                                                                 >  2:555748‑M2/65‑140 (MQ=255)
                                                                            tgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                <  1:1038990‑M2/77‑1 (MQ=255)
                                                                            tgttatcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgcagcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCt                                                                <  1:4418384‑M2/77‑1 (MQ=255)
                                                                                 tcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCacac                                                           <  1:4923375‑M2/82‑1 (MQ=255)
                                                                                 tcaggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCacac                                                           <  1:754295‑M2/82‑1 (MQ=255)
                                                                                    ggagtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCgg                                                        >  1:4324630‑M2/56‑140 (MQ=255)
                                                                                      agtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa                                                      <  2:2152383‑M2/87‑1 (MQ=255)
                                                                                      agtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa                                                      >  2:4964417‑M2/54‑140 (MQ=255)
                                                                                      agtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGGTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGaa                                                      >  1:1716819‑M2/54‑140 (MQ=255)
                                                                                       gtctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAg                                                     <  2:3692508‑M2/88‑1 (MQ=255)
                                                                                        tctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTca                                                              >  2:4060440‑M2/52‑130 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   <  1:3428483‑M2/90‑1 (MQ=255)
                                                                                         ctgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGt                                                   <  2:3510278‑M2/90‑1 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  2:1753735‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTGGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  1:5356052‑M2/50‑140 (MQ=255)
                                                                                          tgcgatgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTACCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTa                                                  >  2:4686735‑M2/50‑140 (MQ=255)
                                                                                              atgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACtt                                              <  1:1011271‑M2/95‑1 (MQ=255)
                                                                                              atgtctgtagcccgtaatctctggcgcgttgctgatgcgacgaacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACtt                                              <  1:2276769‑M2/95‑1 (MQ=255)
                                                                                               tgtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTa                                             >  1:4259734‑M2/45‑140 (MQ=255)
                                                                                                gtctgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTAc                                            >  2:4416579‑M2/44‑140 (MQ=255)
                                                                                                   tgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTa                                         <  1:633313‑M2/100‑1 (MQ=255)
                                                                                                   tgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTa                                         <  2:131395‑M2/100‑1 (MQ=255)
                                                                                                   tgtagcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTa                                         <  2:123943‑M2/100‑1 (MQ=255)
                                                                                                      agcccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTg                                      <  2:2316131‑M2/103‑1 (MQ=255)
                                                                                                        gccgtaatctctggcgcgttgctgatgggcgggacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTGTTTTCGCTCACACCGGAAGGTAACTTACGTAttggc                                    <  2:3239099‑M2/105‑3 (MQ=255)
                                                                                                        cccgtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGAc                                    <  2:693315‑M2/105‑1 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 >  1:4173459‑M2/33‑140 (MQ=255)
                                                                                                           gtaatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCCCTCACACCGGAAGGTAACTTACGTATTGACTAt                                 >  2:939295‑M2/33‑140 (MQ=255)
                                                                                                             aatctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCg                               >  2:1392288‑M2/31‑140 (MQ=255)
                                                                                                               tctctggcgcgtttctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:4645507‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCgcc                             <  2:5179324‑M2/112‑2 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:1123138‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:4964417‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:1951448‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:2711166‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:476404‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:2196216‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:2917733‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  1:2554308‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgctgatgcgccgcacATTGTTACGCCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:2028348‑M2/112‑1 (MQ=255)
                                                                                                               tctctggcgcgttgccgatgcgccccccATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACGCCGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:4159164‑M2/112‑1 (MQ=255)
                                                                                                               tctctcGCGCGTTGATGATGCGCCGGCCATTGTTCCGGCTGCATCCGTTGAGCGCCAGACGGCAGAACAGTTGATTAACGCCTGCCCGGCAGGTCTTTTTTCGCTCACACAGGAAGGTAACTTACGTATTGACTATCGCa                             <  2:1680530/140‑1 (MQ=255)
                                                                                                                 tctggcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGt                           <  1:3722381‑M2/114‑1 (MQ=255)
                                                                                                                     gcgcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGcc                       <  1:2525840‑M2/118‑1 (MQ=255)
                                                                                                                       gcgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTg                     <  1:1419609‑M2/120‑1 (MQ=255)
                                                                                                                       gcgttgctcatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTCTTGACTATCGCAGTTGCCTg                     <  2:5067395‑M2/120‑1 (MQ=255)
                                                                                                                        cgttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTgg                    >  1:3806188‑M2/20‑140 (MQ=255)
                                                                                                                         gttgctgattcgccgcacATTGTTTCGGCTGACTCCGTTGAGCCCAAGACGGCCGAACGGTTGTTTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGTTAACTTACGTATTGACTATCGCAGTTGCCTGGa                   <  1:1738884‑M2/122‑1 (MQ=255)
                                                                                                                          ttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAg                  >  1:5013256‑M2/18‑140 (MQ=255)
                                                                                                                          ttgctgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAg                  >  1:1600998‑M2/18‑140 (MQ=255)
                                                                                                                              tgatgcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGtgtg              <  2:3612769‑M2/127‑1 (MQ=255)
                                                                                                                                  gcgccgcacATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCAc          <  2:3952335‑M2/131‑1 (MQ=255)
                                                                                                                                    gccgcacATTGTTCCGGCTGCCTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCt        <  2:2227578‑M2/133‑1 (MQ=255)
                                                                                                                                       gcacGTTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCCTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGcc     >  2:4924611‑M2/5‑140 (MQ=255)
                                                                                                                                         acATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGt   <  2:1899049‑M2/138‑1 (MQ=255)
                                                                                                                                          cATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGtt  <  1:2997624‑M2/139‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                          
ATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAACCCGTAATCTCTGGCGCGTTGCTGATGCGCCG‑‑‑ATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTT  >  NZ_CP025268/2896133‑2896407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.