| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1743496 = | 0 (0.000) | 764 (0.860) | 176/200 | 0.6 | 100% | coding (40/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743499 | 0 (0.000) | 1061 (1.200) | 179/200 | 0.3 | 100% | coding (43/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 1722 total aligned reads displayed.
TTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGT > NC_000913/1743396‑1743596 | tGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGgg < 1:1249408‑M1/101‑3 (MQ=255) tGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGgg < 2:6874279‑M1/101‑3 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATccc > 2:15447145‑M1/91‑101 (MQ=255) ttCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtg > 1:10279634‑M1/1‑93 (MQ=255) tCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgc < 2:20041393‑M1/101‑10 (MQ=255) aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCgg > 2:19340738‑M1/89‑101 (MQ=255) aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGt > 1:6815657‑M1/88‑101 (MQ=255) ggcggcTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaa < 2:17871974‑M1/101‑13 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGAt > 2:7710508‑M1/85‑101 (MQ=255) gcggcTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaat > 2:1320192‑M1/1‑88 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtct > 2:18591515‑M1/82‑101 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtct < 2:4101029‑M1/20‑1 (MQ=255) ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATtctc > 2:7973185‑M1/81‑101 (MQ=255) cTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagc < 1:10019043‑M1/101‑18 (MQ=255) cTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagc > 1:7595678‑M1/1‑84 (MQ=255) tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTcg < 2:19010098‑M1/22‑1 (MQ=255) tttAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggg < 1:4925104‑M1/101‑21 (MQ=255) ttAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcgggg < 2:5932089‑M1/101‑22 (MQ=255) tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCgcgc > 2:12139350‑M1/77‑101 (MQ=255) aGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTACggaaggtgcgaataagcggggaa < 2:13617507‑M1/101‑24 (MQ=255) tctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaat < 1:7209831‑M1/101‑26 (MQ=255) ctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaatt > 1:11306397‑M1/1‑75 (MQ=255) catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATc > 1:4543248‑M1/72‑101 (MQ=255) tctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattc > 1:12089020‑M1/1‑74 (MQ=255) tctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattc > 2:13887282‑M1/1‑74 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCg < 1:1809385‑M1/31‑1 (MQ=255) ctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattct < 1:15883661‑M1/101‑29 (MQ=255) cATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttc > 2:5099691‑M1/1‑71 (MQ=255) atatAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttct > 2:10399320‑M1/1‑70 (MQ=255) ataACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcg > 2:5475815‑M1/1‑68 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaaa < 1:14387437‑M1/37‑1 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACt < 1:10682661‑M1/39‑1 (MQ=255) aaCTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggc > 1:1369342‑M1/1‑66 (MQ=255) aaCTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggc < 1:17561805‑M1/101‑36 (MQ=255) aCTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggct < 1:2825627‑M1/101‑37 (MQ=255) cTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctg > 1:10988520‑M1/1‑64 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCg > 2:34673‑M1/60‑101 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATgg > 2:6207802‑M1/56‑101 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATgg < 2:4573545‑M1/46‑1 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGt > 1:19755553‑M1/54‑101 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGt < 1:8629390‑M1/48‑1 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtt > 2:2885591‑M1/53‑101 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtt > 2:17419820‑M1/53‑101 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtt > 1:15231766‑M1/53‑101 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtttt < 2:15776007‑M1/51‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTg < 1:2537190‑M1/52‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTg > 1:16642958‑M1/50‑101 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTg > 1:9260398‑M1/50‑101 (MQ=255) gtgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 1:13307831‑M1/101‑51 (MQ=255) gtgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 2:7353777‑M1/101‑51 (MQ=255) gtgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 1:16262101‑M1/101‑51 (MQ=255) tgtTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 1:3682991‑M1/101‑52 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCg > 2:3791089‑M1/47‑101 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGa < 1:4136015‑M1/56‑1 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGAt > 2:19692024‑M1/45‑101 (MQ=255) atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATa > 1:6067752‑M1/44‑101 (MQ=255) cACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc < 1:12903773‑M1/101‑56 (MQ=255) aCGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct > 2:20438043‑M1/1‑45 (MQ=255) acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCg > 1:3059280‑M1/41‑101 (MQ=255) gTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc > 1:9545195‑M1/1‑43 (MQ=255) gTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 2:10748638‑M1/101‑59 (MQ=255) gTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc > 1:5709633‑M1/1‑43 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTg > 2:10025637‑M1/39‑101 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGAt < 1:17090243‑M1/65‑1 (MQ=255) catgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATg > 2:8455204‑M1/36‑101 (MQ=255) aGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt > 2:1608515‑M1/1‑39 (MQ=255) gAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt < 1:15523573‑M1/101‑64 (MQ=255) gAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt < 1:20240278‑M1/101‑64 (MQ=255) aGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg > 2:11037996‑M1/1‑36 (MQ=255) tataTCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 2:15099745‑M1/101‑68 (MQ=255) tataTCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 1:6375725‑M1/101‑68 (MQ=255) tatCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc > 2:9578568‑M1/1‑32 (MQ=255) atCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg > 2:14271241‑M1/1‑31 (MQ=255) atCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg < 1:19046248‑M1/101‑71 (MQ=255) atCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg > 1:3321489‑M1/1‑31 (MQ=255) atatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGggcggc > 2:1253504‑M1/27‑101 (MQ=255) atcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCta < 1:12280664‑M1/77‑1 (MQ=255) gggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGt > 2:11432985‑M1/21‑101 (MQ=255) gacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGc < 1:19405131‑M1/83‑1 (MQ=255) acttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGcc > 2:8821723‑M1/18‑101 (MQ=255) ttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAc > 1:20591296‑M1/16‑101 (MQ=255) cgTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 2:14695072‑M1/1‑19 (MQ=255) tCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt < 1:18481910‑M1/101‑85 (MQ=255) cTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta < 1:11563132‑M1/101‑86 (MQ=255) tattaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg > 1:14686878‑M1/1‑12 (MQ=255) tattaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg > 1:18771319‑M1/1‑12 (MQ=255) attaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 2:12906294‑M1/1‑11 (MQ=255) attaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 1:13955545‑M1/1‑11 (MQ=255) taGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 2:6625929‑M1/1‑9 (MQ=255) ttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcgg < 2:17069772‑M1/97‑1 (MQ=255) tccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcggc < 2:18219964‑M1/98‑1 (MQ=255) gCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg > 1:14897891‑M1/1‑7 (MQ=255) gCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 2:2338401‑M1/101‑95 (MQ=255) gCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 2:11858326‑M1/101‑95 (MQ=255) cTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGcggcgg < 2:1673223‑M1/100‑1 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:8072422‑M1/101‑97 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:17369277‑M1/101‑98 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:1641731‑M1/101‑98 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 1:5274217‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 2:9146204‑M1/101‑98 (MQ=255) | TTTGCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGT > NC_000913/1743396‑1743596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |