| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,743,496 | IS5 (–) +4 bp | coding (40‑43/1374 nt) | mdtK → | multidrug efflux pump MdtK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1743496 = | 0 (0.000) | 764 (0.860) | 176/200 | 0.6 | 100% | coding (40/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1743499 | 0 (0.000) | 1061 (1.200) | 179/200 | 0.3 | 100% | coding (43/1374 nt) | mdtK | multidrug efflux pump MdtK |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 1879 total aligned reads displayed.
GCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGC > NC_000913/1743399‑1743599 | gctgcCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTattagcattag > 2:20216147/1‑101 (MQ=255)gctgcCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTattagcattag > 1:6768414/1‑101 (MQ=255) cTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGg > 2:18061036‑M1/1‑100 (MQ=255) cTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGg > 2:14795023‑M1/1‑100 (MQ=255) cTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGg > 2:7489125‑M1/1‑100 (MQ=255) ccATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaag > 1:19632273‑M1/1‑96 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATcc > 2:3138524‑M1/92‑101 (MQ=255) aTTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATAACAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggt > 2:8166269‑M1/1‑94 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCg < 2:1881110‑M1/12‑1 (MQ=255) tCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgc > 1:20042701‑M1/1‑92 (MQ=255) cAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcg > 1:10259145‑M1/1‑91 (MQ=255) cAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcg > 2:3840160‑M1/1‑91 (MQ=255) gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGa > 1:17312743‑M1/86‑101 (MQ=255) cggcTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaata < 2:5620488‑M1/101‑15 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGAtt > 2:5997642‑M1/84‑101 (MQ=255) ggcTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataa < 2:6383517‑M1/101‑16 (MQ=255) gcTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataag > 1:14579006‑M1/1‑85 (MQ=255) cTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagc < 1:10019043‑M1/101‑18 (MQ=255) cTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagc > 1:5619565‑M1/1‑84 (MQ=255) gTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaa > 1:14786659‑M1/1‑77 (MQ=255) gTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaa < 2:7824311‑M1/101‑25 (MQ=255) tctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaat < 1:7209831‑M1/101‑26 (MQ=255) ctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaatt > 1:8439742‑M1/1‑75 (MQ=255) ctctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaatt < 1:12211107‑M1/101‑27 (MQ=255) ctcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattct < 1:18951822‑M1/101‑29 (MQ=255) tcATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattctt < 1:1200211‑M1/101‑30 (MQ=255) cATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttc < 1:6061854‑M1/101‑31 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGccc < 2:14327431‑M1/34‑1 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCa < 1:19328984‑M1/35‑1 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaa < 2:11432258‑M1/36‑1 (MQ=255) ataACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcg < 1:4866631‑M1/101‑34 (MQ=255) ataACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcg < 2:16932410‑M1/101‑34 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaaa > 1:13618162‑M1/65‑101 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCaaa < 2:16234248‑M1/37‑1 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACt > 2:1656368‑M1/63‑101 (MQ=255) aaCTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggc < 2:12624001‑M1/101‑36 (MQ=255) aCAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgac < 1:17515457‑M1/101‑40 (MQ=255) aCAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaactcttctcggctgac > 2:19866717‑M1/1‑62 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATg < 1:4378490‑M1/45‑1 (MQ=255) aaaTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactc < 1:12808304‑M1/101‑42 (MQ=255) aaaTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactc < 2:18409547‑M1/101‑42 (MQ=255) aaaTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactc < 1:17054086‑M1/101‑42 (MQ=255) aTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag < 2:3540070‑M1/101‑44 (MQ=255) aTAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag < 2:20643443‑M1/101‑44 (MQ=255) tAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 2:8546795‑M1/1‑57 (MQ=255) tAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt < 2:8859896‑M1/101‑45 (MQ=255) tAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt < 1:2698776‑M1/101‑45 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGt > 2:7053294‑M1/54‑101 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGtt < 1:18659420‑M1/49‑1 (MQ=255) aaaaGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc < 1:15399281‑M1/101‑46 (MQ=255) ggTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt > 1:1063279‑M1/1‑52 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCg < 2:1591493‑M1/55‑1 (MQ=255) ttCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 2:15224760‑M1/1‑48 (MQ=255) gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATAcc > 2:9187041‑M1/42‑101 (MQ=255) gCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat < 1:5125344‑M1/101‑61 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGa < 2:10735450‑M1/64‑1 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGa > 1:11539081‑M1/38‑101 (MQ=255) cAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg > 1:3474078‑M1/1‑40 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGAt > 2:4592625‑M1/37‑101 (MQ=255) aGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt < 1:9099705‑M1/101‑63 (MQ=255) gAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt > 1:7570985‑M1/1‑38 (MQ=255) aaGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:9987794‑M1/101‑65 (MQ=255) aGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg > 2:11037996‑M1/1‑36 (MQ=255) tataTCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 1:20429928‑M1/101‑68 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATggcgggc > 1:16146868‑M1/30‑101 (MQ=255) tatCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc > 1:15749410‑M1/1‑32 (MQ=255) tCAGTGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga < 2:13648204‑M1/101‑72 (MQ=255) tcagggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCtat > 1:6366684‑M1/24‑101 (MQ=255) tGAAGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt < 2:13944856‑M1/101‑76 (MQ=255) agggacttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAg < 2:6758139‑M1/80‑1 (MQ=255) aaGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt > 1:13243229‑M1/1‑24 (MQ=255) aGCGCGTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc > 2:15505385‑M1/1‑23 (MQ=255) gcgTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc > 1:17957836‑M1/1‑20 (MQ=255) gcgTCTGTTATTAGCATTAGggaaggtgcgaataagcggggaaagtcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc > 2:9598188‑M1/1‑20 (MQ=255) ttgttcgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCAc > 1:15062124‑M1/16‑101 (MQ=255) cTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta < 1:13939976‑M1/101‑86 (MQ=255) cTGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta > 1:9465897‑M1/1‑16 (MQ=255) tGTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa < 2:12952364‑M1/101‑87 (MQ=255) gTTATTAGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa > 2:13235903‑M1/1‑14 (MQ=255) cgcaccttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACa > 1:2416059‑M1/11‑101 (MQ=255) attaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc < 2:5121388‑M1/101‑91 (MQ=255) ttaGCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc > 2:12188195‑M1/1‑10 (MQ=255) ttccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATggcgg < 2:10372210‑M1/97‑1 (MQ=255) gCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg < 2:11858326‑M1/101‑95 (MQ=255) ccTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGtcggcg < 1:2970194‑M1/99‑1 (MQ=255) cTTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGcggcgg > 2:17559134‑M1/2‑101 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 1:7978334‑M1/1‑5 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:3986161‑M1/101‑97 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa > 2:19144763‑M1/1‑5 (MQ=255) ttagcaATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGt > 2:19405708/1‑101 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 1:10975545‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat > 1:12463070‑M1/1‑4 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:11290563‑M1/101‑98 (MQ=255) ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat < 1:3226751‑M1/101‑98 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 1:14319159‑M1/1‑3 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc > 2:42079‑M1/1‑3 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc < 2:2552986‑M1/101‑99 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca < 1:16476517‑M1/101‑100 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca > 1:18280219‑M1/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca < 2:17283844‑M1/101‑100 (MQ=255) | GCTGCCCATTCAGGCGGCTTTTTAGTCTCTCATATAACTACAAATAAAAGGTGTTCACGTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGC > NC_000913/1743399‑1743599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |