| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM406671 | = 544201 | 1032 (0.930) | 10 (0.020) +AGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAA |
10/176 | 23.5 | 1.6% | coding (1760/2328 nt) | ctpE | cation‑transporting ATPase, E1‑E2 family |
| ? | AM406671 | 544262 = | 1067 (0.960) | coding (1821/2328 nt) | ctpE | cation‑transporting ATPase, E1‑E2 family | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACGATATTTTAGCTATGAAGAGTGCCGATTGTAGTATCGCTATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM406671/544059‑544201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTACAAGCCTCACAACTTTCACTCATTAGTTTATT > AM406671/544262‑544336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| AACGATATTTTAGCTATGAAGAGTGCCGATTGTAGTATCGCTATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAA > 2:4981475/1‑149 TTAGCTATGAAGAGTGCCGATTGTAGTATCGCTATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTG > 2:943138/1‑149 AGCTATGAAGAGTGCCGATTGTAGTATCGCTATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAAAGGGTcagc > 2:7366496/1‑145 TATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGGTTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGGGTCGGAGTTCGTGTAGATCTCGGTGGTCGCCGTATC > 2:8074035/1‑149 AGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGGGTTGGAGTCTGTGTAGATCTCGGTGGGTGCCGAATCATTATAAAAAAAA > 2:3908101/1‑149 TGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAaa > 2:4409287/1‑147 GTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTGGGGAAAGAGGGTCGGCGCCCGTGTAGACCTCTGCGGGCGCCGTATCATTAAAAAAAAATTTTAGCGATTATCTCAGC > 2:1219014/1‑149 CTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTGGGGAAAGAGGGTTGGACTCTGGGTAGCTCTCGGCGGGCGCCGTATCATTATTCAATAATTTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTA > 2:4248430/1‑149 TCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTGGGGAAAGAGTTTTGGACCCTGTGTAGATCTCGGTGGTCGCCGAATCATTAAACAAAAAATTTAGCGCTTATCTCAGCAATCTTTGTATCCACATAT > 2:6634185/1‑149 TTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAATTTAGCGATTATGTCAGCAATCTTTATCTTCACTTATCCCT > 2:4572161/1‑149 CAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAATTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTA > 2:2964969/1‑149 TGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGGGTTGGCGCCCGTGTAGATCTCTGCGGGTACCGAATCATTATTAAAAAAATTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTACAAGCCT > 2:4259114/1‑149 ATGACCCAAGCTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACCCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAATAGCGATTATCTCAGCAACCTTTGTATTCACTTATCCCTTACAAGCCTCACAACT > 2:8085560/1‑149 GACCCAAGTTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTTGCCGTATCATTAAAAAAAAAAATTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTGACAAGCCTCACAACTTT > 2:5898559/1‑149 TTGTCACTGAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACCCTGTGCAGATCTCGCTGGGCGACGAATCATTAAAAAAAAAATTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTACAAGCCTCACAACTTTCACTCATT > 2:2634270/1‑149 GAAGGGCGTCGTGTAGGGAAAGAGTGTTGGACTCTGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAAATTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTACAAGCATCACAACTTTCACTCATTAGTTTATT > 2:3026283/1‑149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| AACGATATTTTAGCTATGAAGAGTGCCGATTGTAGTATCGCTATGGCTTCAGGAAGTGATGCTGCGACCCAAGTTGCACAAGTGGTTTTACTCGATTCAGATTTTGGTCACATGACCCAAGTTGTCACTGAAGGGCGTCGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM406671/544059‑544201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTAGCGATTATCTCAGCAATCTTTGTCTTCACTTATCCCTTACAAGCCTCACAACTTTCACTCATTAGTTTATT > AM406671/544262‑544336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |