Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 1,306,124 | Δ10 bp | coding (107‑116/1461 nt) | cls ← | cardiolipin synthetase |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 1306124 | 1306133 | 10 | 25 [0] | [1] 25 | cls | cardiolipin synthetase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1306123 | 0 (0.000) | 24 (0.660) | 23/148 | 0.7 | 98.0% | coding (117/1461 nt) | cls | cardiolipin synthetase |
? | REL606 | 1306134 = | 1 (0.030) | coding (106/1461 nt) | cls | cardiolipin synthetase |
CGCCAACGGCAAGATAGGCAATAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGG > REL606/1306062‑1306205 | aaatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAggg < 1:175900‑M2/4‑1 (MQ=255) aaatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAggg < 1:510256‑M2/4‑1 (MQ=255) aatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGa < 1:578827‑M2/5‑1 (MQ=255) gccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtc > 2:1170254‑M2/62‑76 (MQ=255) ccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtcg > 2:676256‑M2/61‑76 (MQ=255) ccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtcg < 2:236384‑M2/16‑1 (MQ=255) cggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTc < 1:301197‑M2/20‑1 (MQ=255) caagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCAtt < 1:1073574‑M2/23‑1 (MQ=255) aagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTa < 2:371454‑M2/24‑1 (MQ=255) ataggcaataatcccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGaa > 2:181418‑M2/50‑76 (MQ=255) taggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAAt > 2:226490‑M2/49‑76 (MQ=255) ataattccaactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCGTTAGAATGCGTaa > 2:1069302‑M2/43‑76 (MQ=255) taattccaactaacggcagaatgtaaataatcaacagccagATGGAACTGCGCGTCGTTTCATTAGAATGCGTaaa > 1:785739‑M2/42‑76 (MQ=255) ngcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAAt < 1:1015097‑M2/49‑1 (MQ=255) cagaatataaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGa < 2:805388‑M2/51‑1 (MQ=255) aatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCa > 1:477566‑M2/23‑76 (MQ=255) aaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACcan > 1:1012556‑M2/18‑75 (MQ=255) aaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAg < 1:345959‑M2/59‑1 (MQ=255) ataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTa > 2:1145373‑M2/16‑76 (MQ=255) aatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGCATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATc > 1:876448‑M2/14‑76 (MQ=255) caacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCa > 2:856737‑M2/11‑76 (MQ=255) aacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAg < 2:553925‑M2/67‑1 (MQ=255) cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGa > 2:305192/1‑76 (MQ=255) gccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATg < 1:986580‑M2/71‑1 (MQ=255) ccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATgg < 1:471479‑M2/72‑1 (MQ=255) | CGCCAACGGCAAGATAGGCAATAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGG > REL606/1306062‑1306205 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |