Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	REL606	1,306,124	Δ10 bp	coding (107‑116/1461 nt)	cls ←	cardiolipin synthetase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	1306124	1306133	10	25 [0]	[1] 25	cls	cardiolipin synthetase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 1306123	0 (0.000)	24 (0.660)	23/148	0.7	98.0%	coding (117/1461 nt)	cls	cardiolipin synthetase
	?	REL606	1306134 =	1 (0.030)					coding (106/1461 nt)	cls	cardiolipin synthetase

CGCCAACGGCAAGATAGGCAATAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGG  >  REL606/1306062‑1306205                                                                         |                                                                        aaatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAggg                                                                      <  1:175900‑M2/4‑1 (MQ=255) aaatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAggg                                                                      <  1:510256‑M2/4‑1 (MQ=255)  aatggagctcgccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGa                                                                     <  1:578827‑M2/5‑1 (MQ=255)            gccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtc                                                           >  2:1170254‑M2/62‑76 (MQ=255)             ccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtcg                                                          >  2:676256‑M2/61‑76 (MQ=255)             ccaacggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGcgtcg                                                          <  2:236384‑M2/16‑1 (MQ=255)                 cggcaagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTc                                                      <  1:301197‑M2/20‑1 (MQ=255)                    caagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCAtt                                                   <  1:1073574‑M2/23‑1 (MQ=255)                     aagataggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTa                                                  <  2:371454‑M2/24‑1 (MQ=255)                        ataggcaataatcccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGaa                                               >  2:181418‑M2/50‑76 (MQ=255)                         taggcaataattccgactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAAt                                              >  2:226490‑M2/49‑76 (MQ=255)                               ataattccaactaacggcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCGTTAGAATGCGTaa                                        >  2:1069302‑M2/43‑76 (MQ=255)                                taattccaactaacggcagaatgtaaataatcaacagccagATGGAACTGCGCGTCGTTTCATTAGAATGCGTaaa                                       >  1:785739‑M2/42‑76 (MQ=255)                                              ngcagaatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAAt                         <  1:1015097‑M2/49‑1 (MQ=255)                                                cagaatataaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGa                       <  2:805388‑M2/51‑1 (MQ=255)                                                   aatgtaaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCa                    >  1:477566‑M2/23‑76 (MQ=255)                                                        aaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACcan               >  1:1012556‑M2/18‑75 (MQ=255)                                                        aaataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAg               <  1:345959‑M2/59‑1 (MQ=255)                                                          ataatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTa             >  2:1145373‑M2/16‑76 (MQ=255)                                                            aatcaacagccagAGGGAACTGCGCGTCGTTTCATTAGCATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATc           >  1:876448‑M2/14‑76 (MQ=255)                                                               caacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCa        >  2:856737‑M2/11‑76 (MQ=255)                                                                aacagccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAg       <  2:553925‑M2/67‑1 (MQ=255)                                                                 cATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGa      >  2:305192/1‑76 (MQ=255)                                                                    gccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATg   <  1:986580‑M2/71‑1 (MQ=255)                                                                     ccagAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATgg  <  1:471479‑M2/72‑1 (MQ=255)                                                                         |                                                                        CGCCAACGGCAAGATAGGCAATAATTCCGACTAACGGCAGAATGTAAATAATCAACAGCCAGGCCATCGCGGAGGGAACTGCGCGTCGTTTCATTAGAATGCGTAAAGTTACGCCTGCAATGAGCAACCAGTATCCCAGAATGG  >  REL606/1306062‑1306205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑