| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,094 | (ACAGGC)3→2 | coding (675‑680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014087 = | 3 (0.020) | 130 (1.000) | 68/124 | 0.3 | 98.3% | coding (668/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014080 | 2 (0.020) | coding (661/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 177 total aligned reads displayed.
TACGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014174‑3014087‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTT < REL606/3014080‑3014006 TACGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCG < 1:2796140/76‑1TACGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCG < 1:5009814/76‑1TACGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCCTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCG > 2:256986/1‑76 CGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCC > 2:47675/1‑76 CGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCC < 2:3469428/76‑1 CGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCC < 2:1985106/76‑1 CGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCC > 1:1400712/1‑76 cCAGCAAGTCCCGCAGTTCCGCTTCCATCTGGTTCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTG < 2:1733576/75‑1 AGCAATTCCCGCAGTTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTG < 2:1723914/76‑1 AGCAATTCCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTG < 2:4167303/76‑1 CAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC < 2:2281951/76‑1 CAAGTCCCGCAGGTCCGCTTCCATCTGGATCTTCTGCCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCC < 2:4046802/76‑1 AAGTTCCGCAGGTCCTCTCCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCT < 1:579674/76‑1 AAGTCCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCT < 1:2703372/76‑1 AGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTG > 2:3765462/1‑76 GCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATC > 1:2124760/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCC > 1:2180234/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCC < 1:4798861/76‑1 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCC > 2:1760592/1‑76 CAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCC > 1:1724903/1‑76 AGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCA > 2:3800577/1‑76 GGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAG < 1:958519/76‑1 GTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGA > 1:1216721/1‑76 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAAC > 2:1605763/1‑76 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAAC < 1:4966141/76‑1 CCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCAGTGGATCCAGAAC > 1:2103183/1‑76 CGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACG < 2:2081097/76‑1 CTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTATCGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTT < 1:848754/76‑1 TTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTG < 2:2115628/76‑1 TTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTG > 1:4869246/1‑76 TCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGT > 2:1853786/1‑76 CCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTT > 2:4255222/1‑76 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTTCCTGTGGATCCAGAACGTTGTTGTT > 2:4189723/1‑76 CTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTG > 1:1820518/1‑76 CTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTG > 1:3195194/1‑76 gaATCTTCGGCCCCATCAGCGTATTCACTAACGTGCTCCCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTC < 2:4798892/74‑1 GGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTC > 1:3551100/1‑76 GGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTC > 2:4992528/1‑76 tttTTCTGGCCCATCAGCTTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTT < 2:326850/73‑1 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG > 1:3601783/1‑76 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTG > 1:1451522/1‑76 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGA > 2:4930124/1‑76 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGA > 1:152715/1‑76 TTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGAT < 2:2396643/76‑1 TTCGGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGAT < 1:2833432/76‑1 tcgGGCCCATCAGCTTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATA < 2:3568280/73‑1 TCTGGCCCATCAGCTTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGGGGTGGTTGTCTTGATA < 1:4851025/76‑1 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATA > 2:885756/1‑76 TCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATA < 1:1500449/76‑1 CTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAA > 2:2195584/1‑76 CTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGAACCAGAACGTTGATGCTGTCTTGATAA > 1:4823064/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAG > 2:4525817/1‑76 GGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGA > 1:4500559/1‑76 GCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAG < 1:2585195/76‑1 GCCCACCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAG < 2:1817498/76‑1 CCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAG < 2:1371791/76‑1 CCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAG < 2:738708/76‑1 CATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGC < 1:770899/76‑1 CAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAAT > 1:4107028/1‑76 CGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCC < 2:1958272/76‑1 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCG < 1:802089/76‑1 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCG > 1:450056/1‑76 ATTCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCT > 1:1998068/1‑76 TCACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT > 1:3872544/1‑76 CACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTTTCTTGATAAGAGAGCAATTCCGCTTTG < 2:3955657/76‑1 ACTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGC > 2:3611253/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 2:287671/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 2:2437200/1‑76 AACGTGCTCGCCGCCTGTTCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGG < 1:4189723/76‑1 AACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGG > 1:2436125/1‑76 AACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGG > 1:4528107/1‑76 ACGTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGC < 2:957608/76‑1 GTGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTTCTGGCGT > 2:1713232/1‑76 TGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTC > 1:1683887/1‑76 TGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTC < 1:3945262/76‑1 TGCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTC > 1:40424/1‑76 GCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC > 1:1315526/1‑76 GCTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC > 2:2601455/1‑76 CTCGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCA > 1:1733594/1‑76 CGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGA < 2:4428981/76‑1 CGCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGA > 2:321312/1‑76 GCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 2:1508422/76‑1 GCCGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 1:3667387/76‑1 CGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGC > 2:281450/1‑76 CGCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGC > 1:4920173/1‑76 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT > 2:2408120/1‑76 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG > 1:3346416/1‑76 CCTGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG > 2:543310/1‑76 TGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC < 2:1672149/76‑1 TGTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC < 1:433472/76‑1 GTGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG > 1:157780/1‑76 TGCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGT > 2:125056/1‑76 GCCTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG > 1:624205/1‑76 CTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCC < 1:3646375/76‑1 CTGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCC > 2:3140486/1‑76 TGTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCT > 1:2336276/1‑76 GTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTT < 2:541715/76‑1 GTGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTT < 2:4097898/76‑1 TGGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT < 1:598203/76‑1 GGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTT > 1:3243030/1‑76 TACGTCAGCAAGTTCCGCAGGTCCGCTTCCATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014174‑3014087‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtgcctgtgGATCCAGAACGTTGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTT < REL606/3014080‑3014006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |