| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,094 | (ACAGGC)3→2 | coding (675‑680/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014087 = | 3 (0.020) | 130 (1.000) | 68/124 | 0.3 | 98.3% | coding (668/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014080 | 2 (0.020) | coding (661/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 163 total aligned reads displayed.
GAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACC > REL606/3014005‑3014155 | gAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATc > 1:4739820/1‑76 (MQ=255) aaaaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACACCAACGTTCTGGATCc < 2:4968751‑M2/76‑2 (MQ=255) aagggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca < 1:3064576/73‑1 (MQ=255) aaaGGCCCGCCAGCGTCTGGACGCCAGCAAAGCGTAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca > 2:4005457‑M2/1‑74 (MQ=255) aaaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca < 2:1348028‑M2/76‑3 (MQ=255) aaaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCca < 1:2062013‑M2/76‑3 (MQ=255) aaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcac < 2:541715‑M2/76‑4 (MQ=255) aaGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcac < 2:4097898‑M2/76‑4 (MQ=255) ggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacag < 1:3646375‑M2/76‑6 (MQ=255) ggCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacag > 2:3251638‑M2/1‑71 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggc > 1:624205‑M2/1‑69 (MQ=255) cACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggc < 2:4326062‑M2/76‑8 (MQ=255) aCGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggca < 2:4254426‑M2/76‑9 (MQ=255) aCGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggca > 2:125056‑M2/1‑68 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcac > 2:3783271‑M2/1‑67 (MQ=255) cGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcac > 1:157780‑M2/1‑67 (MQ=255) gCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcaca < 1:433472‑M2/76‑11 (MQ=255) gCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcaca < 2:4799009‑M2/76‑11 (MQ=255) cAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacagg < 2:1651971‑M2/76‑13 (MQ=255) cAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacagg > 1:4177152‑M2/1‑64 (MQ=255) cAGCGGCTGGACGCCAGCGAAGCGGAATTGCTCTCTGCTCAAGAAACCCACAACGTGCTGGATAcaaagggacagg > 2:314493/1‑76 (MQ=255) aGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggc > 2:2408120‑M2/1‑63 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggc < 2:1508422‑M2/76‑17 (MQ=255) tCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcg > 2:4504613‑M2/1‑59 (MQ=255) cTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcga < 2:2593891‑M2/76‑19 (MQ=255) tGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgag > 1:1733594‑M2/1‑57 (MQ=255) ggACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagc > 1:1315526‑M2/1‑56 (MQ=255) gACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagca < 2:2398851‑M2/76‑22 (MQ=255) gACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagca > 1:1683887‑M2/1‑55 (MQ=255) gACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagca > 1:40424‑M2/1‑55 (MQ=255) aCGCCAGAAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcac > 2:1713232‑M2/1‑54 (MQ=255) gCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgt < 2:957608‑M2/76‑25 (MQ=255) ccAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgtt > 1:2436125‑M2/1‑51 (MQ=255) ccAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgtt > 1:4528107‑M2/1‑51 (MQ=255) aGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttag > 2:287671‑M2/1‑49 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagt < 1:3917341‑M2/76‑29 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagt < 1:3395959‑M2/76‑29 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagt < 2:5057999‑M2/76‑29 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagt < 1:1444295‑M2/76‑29 (MQ=255) cAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtg > 1:3631114‑M2/1‑47 (MQ=255) cAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtg < 2:2473107‑M2/76‑30 (MQ=255) cAAAGCGGAATTGCTCTCTTATCAAGAAAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtg < 2:3955657‑M2/76‑30 (MQ=255) aaGCGGAATTGCTCTCTTATCAAGACAACAACAACGTGCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGtt < 1:3466749/76‑1 (MQ=255) cGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatac > 1:450056‑M2/1‑42 (MQ=255) ggAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacg < 2:1958272‑M2/76‑36 (MQ=255) ggAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacg > 1:839179‑M2/1‑41 (MQ=255) gCTCTCTTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatg < 1:770899‑M2/76‑42 (MQ=255) ctctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctggtgggc < 2:1817498‑M2/76‑45 (MQ=255) ctctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggc < 1:2201048‑M2/76‑45 (MQ=255) ctctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggc < 1:2585195‑M2/76‑45 (MQ=255) tctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcc > 1:4500559‑M2/1‑31 (MQ=255) tctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcc > 1:3313179‑M2/1‑31 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcca > 2:2901553‑M2/1‑30 (MQ=255) ctTATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcca > 2:4525817‑M2/1‑30 (MQ=255) ttATCAAGACAGCATCAACGTTCTGGTTCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccag > 1:4823064‑M2/1‑29 (MQ=255) ttATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccag > 2:2195584‑M2/1‑29 (MQ=255) ttATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaataccctgataggccag < 1:3565469‑M2/76‑48 (MQ=255) tATCAAGACAACCACCCCGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaataagctgatgggccaga < 1:4851025‑M2/76‑49 (MQ=255) tATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaga > 2:885756‑M2/1‑28 (MQ=255) tATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaga < 1:1500449‑M2/76‑49 (MQ=255) tATCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaataagctgatgggcccga < 2:3568280‑M2/76‑49 (MQ=255) aTCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcccgaa < 1:2833432‑M2/76‑50 (MQ=255) aTCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgccgatgggccagaa < 1:585228‑M2/76‑50 (MQ=255) tCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgcttatggggcagaag < 1:1924184‑M2/76‑51 (MQ=255) tCAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaag < 1:2353998‑M2/76‑51 (MQ=255) cAAGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaaga > 1:1451522‑M2/1‑25 (MQ=255) aaGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagat < 1:4303972‑M2/76‑53 (MQ=255) aaGACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaataagctgatgggccagaaaaa < 2:326850‑M2/76‑53 (MQ=255) gACAACAACAACGTTCTGGATCcacaggcacaggcggggagcacgttagtgaatacgctgatggggccgaagattc < 2:4798892‑M2/76‑55 (MQ=255) gACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcc > 1:37830‑M2/1‑22 (MQ=255) gACAACAACAACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagaacc < 1:610897‑M2/76‑55 (MQ=255) acaacaacaACGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatcca < 2:1684426‑M2/76‑56 (MQ=255) caacaacaaCGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccag > 1:3195194‑M2/1‑20 (MQ=255) caacaacaaCGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccag > 1:1820518‑M2/1‑20 (MQ=255) caacaacaaCGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccag > 1:1549282‑M2/1‑20 (MQ=255) aacaacaacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccaga > 2:2339295‑M2/1‑19 (MQ=255) aacaacaacGTTCTGGATCcacaggaacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccaga > 2:4189723‑M2/1‑19 (MQ=255) aacaacaacGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCagaaga < 1:3803272/76‑1 (MQ=255) acaacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga > 2:711044‑M2/1‑15 (MQ=255) acaacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatgga > 2:1853786‑M2/1‑15 (MQ=255) caacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaa > 1:4869246‑M2/1‑14 (MQ=255) caacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaa < 2:2115628‑M2/76‑63 (MQ=255) aacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaag > 2:2799734‑M2/1‑13 (MQ=255) aacGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaag > 1:404071‑M2/1‑13 (MQ=255) aacGTTCTGGATCcacaggcacaggcggcgagcacgatagtgaatacgctgatgggccagaagatccagatggaag < 1:848754‑M2/76‑64 (MQ=255) cGTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcg < 2:2081097‑M2/76‑66 (MQ=255) gTTCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcgg < 1:4966141‑M2/76‑67 (MQ=255) ttCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaaaagatccagatggaagcgga < 2:3633361‑M2/76‑68 (MQ=255) tCTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggac > 1:1216721‑M2/1‑8 (MQ=255) cTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgctgggccagaagatccagatggaagcggacc < 2:1961544‑M2/76‑70 (MQ=255) cTGGATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacc < 1:958519‑M2/76‑70 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaatacgcttatgggccagaagatccccatggaagcggacctg < 1:211533‑M2/76‑72 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctg > 1:1724903‑M2/1‑5 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctg > 2:1760592‑M2/1‑5 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctg > 1:4957526‑M2/1‑5 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctg < 1:4798861‑M2/76‑72 (MQ=255) ggATCcacaggcacaggcggcgagcacgttagtgaataagctgatgggccagaagatccagatggaagcggacctg < 2:1583066‑M2/76‑72 (MQ=255) gttccacaggcacaggtggcgagcacgttagtgaatgcgctgatgggccagaagatccagatggaagcggacctgc > 1:2712397‑M2/3‑4 (MQ=255) gATCcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaagatccagatggaagcggacctgc > 1:2124760‑M2/1‑4 (MQ=255) ccacaggcacaggcggcgagcaagttagagaatacgctgatgggcgcgaagatcccgatggaagcggacctgcgga < 2:804294‑M2/76‑76 (MQ=255) | GAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGATCCAGATGGAAGCGGACC > REL606/3014005‑3014155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |