| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 379585 | 457 (1.690) | 207 (0.760) | 10/150 | 17.6 | 28.6% | intergenic (+110/+135) | yajF/araJ | fructokinase/predicted transporter |
| ? | REL606 | = 2583282 | 578 (2.130) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 475 total aligned reads displayed.
GACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTA > REL606/379510‑379660 | gACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCg > 2:5546500/1‑76 (MQ=255)gACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGACGCATCCg > 2:373677/1‑76 (MQ=255) cGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc < 2:1503076/76‑1 (MQ=255) cTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa > 2:8988324/1‑76 (MQ=255) cTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa < 1:4402191/76‑1 (MQ=255) ttGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt > 1:1212757/1‑76 (MQ=255) ttGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt < 2:5811452/76‑1 (MQ=255) tGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATa > 1:4028571/1‑76 (MQ=255) tGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATa > 2:4827338/1‑76 (MQ=255) gCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATaa < 2:8789890/76‑1 (MQ=255) gCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATaa < 1:8696575/76‑1 (MQ=255) ccGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAg < 2:5336846/76‑1 (MQ=255) cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt < 2:68209/76‑1 (MQ=255) cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt < 2:1593959/76‑1 (MQ=255) cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt > 2:8697519/1‑76 (MQ=255) cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt < 2:1965604/76‑1 (MQ=255) gcgTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATaaagg > 1:2577431/1‑73 (MQ=255) tCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTc > 2:4783770/1‑76 (MQ=255) ttATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCg > 1:3396833/1‑76 (MQ=255) tATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGa < 2:2130416/76‑1 (MQ=255) aTCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt > 1:1723602/1‑76 (MQ=255) aTCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt < 2:2616264/76‑1 (MQ=255) aTCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGAt < 2:4550421/76‑1 (MQ=255) aTCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGGGCTCCgct > 2:1244597/1‑74 (MQ=255) tCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATg > 2:4364621/1‑76 (MQ=255) tCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATg < 1:7210337/76‑1 (MQ=255) cAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGc < 2:4698057/76‑1 (MQ=255) aGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGcc < 1:5386544/76‑1 (MQ=255) gCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg < 2:4145088/76‑1 (MQ=255) gCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg < 1:7596159/76‑1 (MQ=255) gCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg > 1:6883910/1‑76 (MQ=255) ccTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa < 2:5266296/76‑1 (MQ=255) aCAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc > 1:3841003/1‑76 (MQ=255) aCAAAAGGGGCCAGGACCGTAGGCCGGATAAGGCGTTCACGCCGCGTCCGGCAATAAGTGCTCCGATGCCTGATGc < 1:6527985/76‑1 (MQ=21) cAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCg < 1:940727/76‑1 (MQ=255) aaaaGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGa > 1:7366550/1‑76 (MQ=255) aaaaGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGa > 2:2700331/1‑76 (MQ=255) aaaaGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGa > 2:8374494/1‑76 (MQ=255) aaaGGTGCCAGAACCGTAGGCCGGAAAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGAc > 2:6646439/1‑76 (MQ=255) aaGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGAGACg > 2:718114/1‑76 (MQ=255) ggTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCt > 2:5884012/1‑76 (MQ=255) gggCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCtt < 2:1139679/74‑1 (MQ=255) gTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGCCGCtt > 1:8260295/1‑76 (MQ=255) gTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCtt < 1:5782840/76‑1 (MQ=255) gTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCtt < 1:1006481/76‑1 (MQ=255) gTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATACGACGCtt > 1:4568702/1‑76 (MQ=255) cAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg < 2:7047779/76‑1 (MQ=255) cAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg < 2:7998739/76‑1 (MQ=255) tgAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgc > 2:6557802/2‑76 (MQ=255) gAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgcg > 2:5028561/1‑76 (MQ=255) ccGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCt < 2:8224921/76‑1 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCtt > 2:1289687/1‑76 (MQ=255) cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCtt < 2:7525565/76‑1 (MQ=255) gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTa > 2:2280349/1‑76 (MQ=255) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTAt < 1:1570316/76‑1 (MQ=255) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTAt > 2:3198866/1‑76 (MQ=255) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTAt > 2:8561346/1‑76 (MQ=255) aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATc > 2:3929370/1‑76 (MQ=255) aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATc > 1:4278655/1‑76 (MQ=255) ggCCGGATAAGGCGTTCCCGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCa < 2:6433761/76‑1 (MQ=255) ggCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCa < 1:8378458/76‑1 (MQ=255) gggggATAAGGCTTTCACCCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 2:7727119/73‑1 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:6370306/76‑1 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:7745553/76‑1 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:4108231/76‑1 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 2:7876590/76‑1 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 1:2870838/76‑1 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 2:2432627/76‑1 (MQ=255) cGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc > 2:7401714/1‑76 (MQ=255) cGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 2:3384138/76‑1 (MQ=255) gATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 2:1084255/1‑76 (MQ=255) gATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt < 2:1757654/76‑1 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTg > 2:6194831/1‑76 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTg > 2:2054521/1‑76 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTg < 2:5226024/76‑1 (MQ=255) tAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGc > 2:5632767/1‑76 (MQ=255) tAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGCCTTATCAGGCCTGc > 2:8848606/1‑76 (MQ=255) aaGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCa > 2:3641744/1‑76 (MQ=255) aaGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCa > 2:1884849/1‑76 (MQ=255) aGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaa > 2:3110809/1‑76 (MQ=255) aGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaa > 2:2867287/1‑76 (MQ=255) ggCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaa > 2:8076245/1‑76 (MQ=255) ggCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCaaa > 2:382675/1‑76 (MQ=255) ggTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTCATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAt < 1:4637724/75‑1 (MQ=255) cGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAt < 1:4846788/76‑1 (MQ=255) cGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAAt < 1:5027591/76‑1 (MQ=255) cACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGc > 2:4268430/1‑76 (MQ=255) cACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGc < 1:2155116/76‑1 (MQ=255) ccgcATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGa > 2:5130674/1‑76 (MQ=255) cgcATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGaa < 1:3608704/76‑1 (MQ=255) cATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAAcc > 2:5979396/1‑76 (MQ=255) cATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTACCAGGCCTGCAAAATGTGCCAGAAcc < 1:5511959/76‑1 (MQ=255) aTCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcg > 2:6238848/1‑76 (MQ=255) aTCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcg > 1:6113146/1‑76 (MQ=255) aTCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACcg > 1:2105963/1‑76 (MQ=255) ccGGCAATAAGGTCTCCGATGCCTGTTGCGACGCTTGCCGCGTCTTGTCAGGCCTGCAAAATGTGCCAGTATcgca < 2:6295831/76‑2 (MQ=18) cGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGt > 2:7098608/1‑76 (MQ=255) cGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGt < 1:3173963/76‑1 (MQ=255) ggCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTa < 1:7970572/76‑1 (MQ=255) ggCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTa < 2:5450971/76‑1 (MQ=255) | GACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAATGTGCCAGAACCGCGTA > REL606/379510‑379660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |