| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 379585 | 457 (1.690) | 207 (0.760) | 10/150 | 17.6 | 28.6% | intergenic (+110/+135) | yajF/araJ | fructokinase/predicted transporter |
| ? | REL606 | = 2583282 | 578 (2.130) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 578 total aligned reads displayed.
GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 | gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:4625759/76‑1 (MQ=31) ccTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:2987252/76‑1 (MQ=17) ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:1150626/76‑1 (MQ=32) ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:2396728/76‑1 (MQ=32) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:7022538/76‑1 (MQ=21) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:7777012/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 1:1478066/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 2:5338736/76‑1 (MQ=35) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtt > 2:6049194/1‑76 (MQ=17) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtt > 2:1508333/1‑76 (MQ=17) tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑c < 1:1141989/76‑1 (MQ=38) aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTAtttg > 1:3417117/1‑74 (MQ=12) ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑CGGc > 2:3821299/1‑76 (MQ=255) cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGcc < 2:4907203/76‑1 (MQ=255) cccTGCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCtt < 2:7625049/75‑1 (MQ=255) cccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCtt < 1:2508516/75‑1 (MQ=255) aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCtt < 1:203891/76‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCCGGCCtt > 2:5798637/1‑76 (MQ=11) ctgcGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGt < 2:5466587/73‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGt < 2:1030345/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGt < 1:6327219/76‑1 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGt < 1:5235606/76‑1 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑TGGCCTtttt > 1:4105366/1‑76 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGtt < 2:1791789/76‑1 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGtt < 1:6923257/76‑1 (MQ=255) tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑CGGCCTTGtt > 2:6258827/1‑76 (MQ=255) ggTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑CGGCCTTGTTAcc > 1:6202295/1‑76 (MQ=255) gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCt < 1:4409230/76‑1 (MQ=255) gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCt < 2:2317684/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CTGGCTTTTTACCtt > 2:1909564/1‑76 (MQ=14) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGGCTTGTTACCtt > 2:4043721/1‑76 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCtt < 1:576402/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCtt > 1:7304000/1‑76 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCtt < 2:6866247/76‑1 (MQ=255) ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTGTT‑CGGCGCTGTTACCtt > 2:2152594/1‑76 (MQ=14) ttCTATTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCtt < 1:3781771/76‑1 (MQ=255) tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCttt < 1:5892400/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTa > 2:2030383/1‑76 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:872832/55‑1 (MQ=31) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTa > 1:6669028/1‑69 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTAt < 1:8766843/76‑1 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTAt < 1:4593272/76‑1 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑CGGGCTTGTTACCttttt > 2:4784334/1‑74 (MQ=17) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTTTTACCTTTATTct > 2:8891490/1‑76 (MQ=255) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTct < 2:4129054/76‑1 (MQ=255) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTct < 1:127696/76‑1 (MQ=255) tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTct < 1:7877260/76‑1 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTctg < 1:3549550/76‑1 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTctg < 2:2699874/76‑1 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTctg > 1:6415949/1‑76 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑TGGCCTTGTTACCTTTATTctg > 2:7374287/1‑76 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATT‑TCGCCTTTTTACCTTTAttttt > 2:921086/1‑73 (MQ=17) aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTctgc < 1:2657418/76‑1 (MQ=255) cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTctgct < 1:4867318/76‑1 (MQ=255) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCtgctgc > 2:7285280/1‑76 (MQ=255) tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTgctgct > 2:2269363/1‑76 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTc < 1:717574/76‑1 (MQ=255) gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCaa < 2:3458063/76‑1 (MQ=255) gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCaa < 1:2983360/76‑1 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTTTTCTGCTGCTCAAt > 2:1328024/1‑76 (MQ=255) ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAAt < 1:4031333/76‑1 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑TGGCCTTGTTACCTTTATTCTGCTGCTCACTa > 1:8122136/1‑76 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATa < 1:4329123/76‑1 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATa > 2:3645268/1‑76 (MQ=255) gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCCATAGa > 1:2234215/1‑76 (MQ=255) gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa < 1:3901348/76‑1 (MQ=255) aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaa < 2:6538132/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg < 2:3202677/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg > 2:8541292/1‑76 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGACTTGTTACCTTTATTCTGCTGCTCAATAGAAg > 2:791232/1‑76 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaaac > 2:8189489/1‑74 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc < 2:2909542/76‑1 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc > 2:526334/1‑76 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 1:8589155/76‑1 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 2:7492242/76‑1 (MQ=255) aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg < 1:1009221/76‑1 (MQ=255) aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg < 1:1344357/76‑1 (MQ=255) cGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa < 1:3179874/76‑1 (MQ=255) cGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa > 1:4740787/1‑76 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt < 1:5695808/76‑1 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc < 1:2723788/76‑1 (MQ=255) tACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc < 2:3911161/76‑1 (MQ=255) cgcgTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgc < 1:2424690/76‑1 (MQ=255) gTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCa < 1:748709/76‑1 (MQ=255) gCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa < 1:1916393/76‑1 (MQ=255) gCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa > 1:5622433/1‑76 (MQ=255) aTCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGata < 2:7859531/76‑1 (MQ=255) aGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc < 1:1654911/76‑1 (MQ=255) ggCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCa < 1:9008010/76‑1 (MQ=255) cAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc < 2:6646023/76‑1 (MQ=255) cAACGGCTGGTATT‑CGGCCTTGTTTCCTTTATTCTGCTGCTCAATAGAAGCCAGAATACCCCGCAGGATATTCAAc > 2:436286/1‑76 (MQ=255) aaCGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACt < 1:7009202/76‑1 (MQ=255) ggCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt < 1:2879522/76‑1 (MQ=255) gCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 2:5091116/76‑1 (MQ=255) gCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 2:8331154/76‑1 (MQ=255) gCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 1:6612846/76‑1 (MQ=255) gCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg < 1:8357435/76‑1 (MQ=255) gTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCt < 2:4531853/76‑1 (MQ=255) ttATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc < 1:5034347/42‑1 (MQ=255) ttATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt < 2:5597096/76‑1 (MQ=255) | GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATT‑CGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |