| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 715842 | 249 (0.920) | 8 (0.030) | 7/134 | 18.2 | 3.7% | coding (449/570 nt) | ybfC | hypothetical protein |
| ? | REL606 | = 715985 | 189 (0.780) | intergenic (+22/‑174) | ybfC/ECB_00662 | hypothetical protein/conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 229 total aligned reads displayed.
TACGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTCCG > REL606/715910‑716060 | aCGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAaaataaat > 1:5334549/1‑76 (MQ=255) aCGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAaaataaat < 2:5852157/76‑1 (MQ=255) cGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAAtt < 1:7146732/76‑1 (MQ=255) cGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAAtt > 1:5986894/1‑76 (MQ=255) aaTGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTaa > 2:197527/1‑76 (MQ=255) aaTGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTaa > 2:6724695/1‑76 (MQ=255) aTGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAAc > 1:8609312/1‑76 (MQ=255) tGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAAcc > 2:8706667/1‑76 (MQ=255) tGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAAcc < 1:3277036/76‑1 (MQ=255) gTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCa < 1:6498133/76‑1 (MQ=255) gTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCa < 1:2225194/76‑1 (MQ=255) gTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCa > 2:1152287/1‑76 (MQ=255) gTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCa > 1:4845381/1‑76 (MQ=255) gTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCa > 1:3394762/1‑76 (MQ=255) tttAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCAt > 2:8853861/1‑76 (MQ=255) tttAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCAt < 2:1055098/76‑1 (MQ=255) ttAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCAtt < 1:8152124/76‑1 (MQ=255) ttAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCAtt < 2:2635823/76‑1 (MQ=255) tAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTc < 1:3928658/76‑1 (MQ=255) aCAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCgg > 2:3012319/1‑76 (MQ=255) cAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGa < 1:5814723/76‑1 (MQ=255) aaaaTACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGaaa > 1:8262159/1‑76 (MQ=255) aaaaTACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGaaa > 2:8194371/1‑76 (MQ=255) aaaaTACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGaaa < 1:8843690/76‑1 (MQ=255) aaaTACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGaaaa < 1:5421980/76‑1 (MQ=255) aTACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAAc < 2:7536065/76‑1 (MQ=255) tACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACa > 2:7260468/1‑76 (MQ=255) aCAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACAt < 1:1961411/76‑1 (MQ=255) cAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATg < 2:6343675/76‑1 (MQ=255) aTGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCt < 1:5648179/76‑1 (MQ=255) aTGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCt > 1:2626345/1‑76 (MQ=255) tGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCtt < 2:7452711/76‑1 (MQ=255) tGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCtt > 2:2877736/1‑76 (MQ=255) gAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTa < 2:4459972/76‑1 (MQ=255) gAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTa > 1:5902415/1‑76 (MQ=255) gAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTa > 1:145202/1‑76 (MQ=255) aaCTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTaa < 1:8982277/76‑1 (MQ=255) aaCTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTaa < 1:8249469/76‑1 (MQ=255) aaCTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTaa < 2:6866674/76‑1 (MQ=255) aaCTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTaa > 1:4149789/1‑76 (MQ=255) cTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATg < 1:7402735/76‑1 (MQ=255) cTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATg < 2:8922237/76‑1 (MQ=255) gCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGa > 1:7578413/1‑76 (MQ=255) gCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGa > 1:4889331/1‑76 (MQ=255) gCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGa > 1:5092334/1‑76 (MQ=255) cTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGat > 2:4954310/1‑76 (MQ=255) cTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGat < 2:1918138/76‑1 (MQ=255) ttCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGata > 1:1029343/1‑76 (MQ=255) ttCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGata > 1:6558370/1‑76 (MQ=255) tCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGatat < 1:189219/76‑1 (MQ=255) cGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATc < 1:283932/76‑1 (MQ=255) gTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTaa > 1:2953315/1‑67 (MQ=255) aGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAg > 2:8002702/1‑76 (MQ=255) aGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAg > 2:7235467/1‑76 (MQ=255) aGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAg > 1:1997194/1‑76 (MQ=255) aGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAg > 1:907830/1‑76 (MQ=255) tGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGt > 2:6633308/1‑76 (MQ=255) gaagaaAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTa < 2:7713979/76‑1 (MQ=255) aagaaAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTac < 2:267136/76‑1 (MQ=255) aaaaaTAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACAcc < 1:2828249/76‑1 (MQ=255) aaTAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGa < 2:2357022/76‑1 (MQ=255) aaTAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGa < 1:6277553/76‑1 (MQ=255) aTAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGaa < 1:2509814/76‑1 (MQ=255) tAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAg < 2:2832236/76‑1 (MQ=255) tAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAg < 1:5526455/76‑1 (MQ=255) aaaaCATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAgg > 2:6946747/1‑76 (MQ=255) aaaaCATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAgg > 2:6126989/1‑76 (MQ=255) aaaCATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGt > 2:7366352/1‑76 (MQ=255) aaaCATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGt > 2:5535278/1‑76 (MQ=255) aCATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCg < 1:5926364/76‑1 (MQ=255) aTCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAt < 2:5169865/76‑1 (MQ=255) tCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAtt < 2:5997328/76‑1 (MQ=255) tCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAtt < 2:2902057/76‑1 (MQ=255) tCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAtt < 1:8039671/76‑1 (MQ=255) cTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAttt < 2:4182134/76‑1 (MQ=255) cTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGAttt > 1:2361705/1‑76 (MQ=255) ttCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTg > 2:6436404/1‑76 (MQ=255) tCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTgg > 2:2111154/1‑76 (MQ=255) ccTGAGAAAATAAATTAACCGTTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGa > 1:5307812/1‑76 (MQ=255) ccTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGa > 1:5542221/1‑76 (MQ=255) ccTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGa < 2:2380366/76‑1 (MQ=255) cTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaa > 1:72160/1‑76 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa > 2:705192/1‑76 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa < 1:3262629/76‑1 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa < 1:3060062/76‑1 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa < 1:4610720/76‑1 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa > 1:8344143/1‑76 (MQ=255) tGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaa < 1:6104745/76‑1 (MQ=255) gagaAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGaaaa < 2:3896511/76‑1 (MQ=255) gaAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAAt < 2:4875715/76‑1 (MQ=255) aataaatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGa > 2:4658191/1‑76 (MQ=255) taaatTAACCATTCGGAAAAACATGTTGTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGAtt > 1:4665358/1‑76 (MQ=255) taaatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGAtt > 1:6675277/1‑76 (MQ=255) aaatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTc > 2:5428860/1‑76 (MQ=255) aaatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTc < 1:1152287/76‑1 (MQ=255) aaatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGCCGATTTGGAAAAATGGATTc > 2:3592186/1‑76 (MQ=255) aatTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTcc > 2:3146501/1‑76 (MQ=255) atTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTCCg > 1:4212938/1‑76 (MQ=255) atTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTCCg > 2:7932599/1‑76 (MQ=255) atTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTCCg < 1:1350036/76‑1 (MQ=255) | TACGAATGTTTAACAAAAATACAGCATGAACTGCTTCGTAGTGAAGAAAAATAAAACATCTTCCTGAGAAAATAAATTAACCATTCGGAAAAACATGTTCTTAATGGATATCCAGGTACACCAGAAGGTCGATTTGGAAAAATGGATTCCG > REL606/715910‑716060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |