| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1405596 = | 236 (0.750) | 13 (0.040) | 6/140 | 21.4 | 5.6% | coding (377/984 nt) | ydaN | zinc transporter |
| ? | REL606 | 2034535 = | NA (NA) | noncoding (559/768 nt) | IS1 | repeat region | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 140 total aligned reads displayed.
ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1405675‑1405596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG > REL606/2034535‑2034609 ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCC < 1:9824810/76‑1ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCC > 1:2642204/1‑76ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCC > 1:4702590/1‑76ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCC < 1:390307/76‑1 TCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCA < 1:6052202/76‑1 CGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAG < 1:7092434/76‑1 CGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAG > 1:3270046/1‑76 GCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAGC > 1:5688458/1‑76 CACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAGCG > 2:8853951/1‑76 tcaTCCAGCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCG < 2:5537419/73‑1 agCCAGCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGCGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 2:1962296/74‑1 aTCCAGCGTCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 1:3701204/75‑1 aTCCAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 1:8036529/75‑1 aTCCAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 1:6175852/75‑1 aTCCAGCGGCCACCAATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 2:443529/75‑1 aTCCACCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTC < 1:7445161/75‑1 aCCAGCGGCCGGCCATCCGCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCG < 2:4861006/75‑1 TCCGGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCG < 2:1317232/76‑1 acgGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGC < 2:5891631/73‑1 CCAGCGGCCAGCCATCC‑TCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 1:1287349/76‑1 CAGGGGCGACCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:7129866/76‑1 CAGCGGCCGGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:9245779/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:4993461/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 2:5638424/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:6035328/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:6359316/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 2:3703262/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 1:9905926/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 1:855087/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:2286584/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 1:7829807/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 1:1660038/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 1:2293774/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 1:4465907/76‑1 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC > 1:2750915/1‑76 CAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 1:3440185/76‑1 CAGCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCC < 2:8936724/76‑1 gGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:9370957/75‑1 cggGGCCAGACATCCTTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:7219755/73‑1 AGCGGCCGGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:9296166/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:6492112/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA > 1:10010331/1‑76 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:2697730/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA > 2:4453440/1‑76 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA > 2:580285/1‑76 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 1:2470344/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 1:8906636/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:927953/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:9513611/76‑1 AGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:131754/76‑1 AGCCGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCA < 2:2557644/76‑1 ggGGCCCGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:1153649/74‑1 ggGGCCAGCCATCCGACATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:8135443/74‑1 GCGGCCGCCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:9633562/76‑1 GCGGCCGCCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:1776320/76‑1 GCGGCCAGCCATCCGTCATCCATATCCCCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 1:6552352/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 1:788595/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:7050257/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:2509329/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 1:713816/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:7342307/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:1917122/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:2760427/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:2990317/76‑1 GCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:9595882/76‑1 GCGGCCAGCCACCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:9573999/76‑1 GCGGCCACCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:10270158/76‑1 GCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 1:442065/76‑1 GCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 2:3765717/76‑1 GCGCCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCAT < 1:5936740/76‑1 gGGCCAGCACTCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:4918359/75‑1 gGGCCACCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:2953250/75‑1 CGGCCCGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:8176721/76‑1 CGGCCAGCCTTCGTCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:4503275/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA > 2:9358664/1‑76 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 1:7326435/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:1088306/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA > 1:6818292/1‑76 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 1:2206924/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:6767106/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 1:6776298/76‑1 CGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:6841308/76‑1 CGGCCAGCCATCCGCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:6587534/76‑1 CGGCCAGCCATCCGCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:5538964/76‑1 CGGCCAGCCACCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 1:9034802/76‑1 CGGCCACCCATCCTTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 2:1522326/76‑1 CGGCCACCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATA < 1:1908947/76‑1 GGCCCGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:1560701/76‑1 GGCCAGCCCTCCTTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:5800711/76‑1 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:2659205/76‑1 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG > 2:750949/1‑76 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG > 2:1160527/1‑76 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 1:9585726/76‑1 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG > 2:5490055/1‑76 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:5191628/76‑1 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:1678360/76‑1 GGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:1691510/76‑1 GGCCAGCCACCCGCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:7108676/76‑1 GGCCAGCAATCCGCCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:9422437/76‑1 GGCCACCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG < 2:1432672/76‑1 ATCGCACACATCCACCAGCCATCCCCCGCAATCGGTCGGACCCGTGCCCTCTTCCAGATCGCTCACCACATCGTCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1405675‑1405596‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACATCAGGCTCATAAGACGCCCCAGCGTCGCCATAG > REL606/2034535‑2034609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |