| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,068 | (AAC)3→2 | coding (649‑651/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014063 = | 3 (0.010) | 291 (1.310) | 106/134 | 0.1 | 99.0% | coding (644/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014059 | 3 (0.010) | coding (640/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 354 total aligned reads displayed.
CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014145‑3014063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgttgtCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAAGG < REL606/3014059‑3013985 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACG < 2:4991643/76‑1 TCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTT < 1:3092061/76‑1 ATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT > 2:5591035/1‑76 TCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTC > 2:3855101/1‑76 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCT > 1:4419661/1‑76 CTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCT > 2:6843022/1‑76 CTTCTGCCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCT < 2:4672392/76‑1 TTCTGCCCCATCAGCGTATTCACTACCGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTT < 1:2669621/76‑1 TCTGCCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTG < 1:7276788/76‑1 CTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGA > 2:131877/1‑76 TGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGAT > 1:6323382/1‑76 GGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATA > 2:5241354/1‑76 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAG < 1:6650749/76‑1 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAG < 1:3881482/76‑1 CCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAG < 1:4020138/76‑1 CCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGA > 2:6500006/1‑76 ATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGA < 1:5008785/76‑1 TCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAG < 1:2254746/76‑1 TCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAG < 1:6531354/76‑1 CAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGC > 1:8071955/1‑76 AGCGTATTCCCTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCA < 2:5966665/76‑1 AGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCA < 2:836075/76‑1 GCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAA < 1:987965/76‑1 CGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAAT > 2:4030110/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATT > 2:7600359/1‑76 GTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATT < 2:7467588/76‑1 TATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTC < 2:6798758/76‑1 ATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCC > 1:363083/1‑76 ATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCC > 1:5531674/1‑76 TCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGC > 2:2089831/1‑76 CACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCT > 2:1114573/1‑76 ACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTT < 1:7681692/76‑1 ACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTT > 2:731850/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT > 2:628762/1‑76 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:5258344/76‑1 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 2:6970705/76‑1 CTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTT < 1:3778342/76‑1 TAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTG < 1:864622/76‑1 ACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCT > 1:23419/1‑76 CGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTG < 1:2896790/76‑1 TGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGC > 1:4939413/1‑76 GCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCG > 2:225427/1‑76 GCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCG > 1:3930369/1‑76 CGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCa > 2:5822053/1‑75 CGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC < 1:2481688/76‑1 CGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCC > 2:1186404/1‑76 CCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAG < 1:3556206/76‑1 CCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAG < 1:6810924/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 2:2405754/76‑1 GCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGAC < 1:4099624/76‑1 CCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACG > 1:5836649/1‑76 TGTGCCTGTGCCTGTGGATCCATAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT > 1:3341484/1‑76 TGTGCCTGTGCCTGTGGATCCATAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT > 1:6929678/1‑76 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT < 2:6082726/76‑1 TGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCT > 1:5942631/1‑76 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG > 1:446284/1‑76 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 2:7738867/76‑1 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 1:743398/76‑1 GTGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTG < 1:6081023/76‑1 TGCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGG > 2:4385570/1‑76 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 1:827557/1‑76 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 2:4802617/1‑76 GCCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGC > 1:101061/1‑76 CCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 2:6538961/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 1:2012008/76‑1 CCTGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCG < 2:1762697/76‑1 TGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG > 1:7892654/1‑76 TGTGCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTG < 2:3484024/76‑1 GCCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCT > 1:1836668/1‑76 CCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTT > 2:5317876/1‑76 CCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTT < 2:1565973/76‑1 CCTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTT > 2:1708849/1‑76 CTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT > 1:1416855/1‑76 CTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT > 2:4296304/1‑76 CTGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTT > 2:4157616/1‑76 TGTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTT < 1:5314886/76‑1 GTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTC > 2:1856452/1‑76 GTGGATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTC < 1:6262152/76‑1 TGGATCCAGAACGTTATTGTCTTGATAAGAGAGCAATTACGCTTTGCTGGCGTCCAGACGCTGGCGTGCTTTTTCC > 2:6168249/1‑76 GATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCCTTTCCAT > 2:3156765/1‑76 ATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATC > 2:2857667/1‑76 ATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATC > 2:3532193/1‑76 ATCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATC > 2:7123688/1‑76 TCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCT < 1:1316471/76‑1 TCCAGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCT > 1:1659094/1‑76 AGAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCG < 2:4622770/76‑1 GAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGT < 2:3775075/76‑1 GAACGTTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGT > 2:3016394/1‑76 TTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTG < 2:5153658/76‑1 TTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTG > 1:1586443/1‑76 TTGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTG > 2:2534103/1‑76 TGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGC > 1:2620230/1‑76 TGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGC > 1:5198229/1‑76 TGTTGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGC < 2:7849346/76‑1 TGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTTCATCTCCGTTTCTGCAAA > 1:4612234/1‑76 TGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAA < 2:8069259/76‑1 TGTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAA > 1:4314356/1‑76 GTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAAG < 1:3445341/76‑1 GTCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAAG < 1:4842275/76‑1 TCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAAGG < 2:6662588/76‑1 CATCTGGATCTTCTGGCCCATCAGCGTATTCACTAACGTGCTCGCCGCCTGTGCCTGTGCCTGTGGATCCAGAACGTTGTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3014145‑3014063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgttgtCTTGATAAGAGAGCAATTCCGCTTTGCTGGCGTCCAGACGCTGGCGTGCCTTTTCCATCTCCGTTTCTGCAAAGG < REL606/3014059‑3013985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |