| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,068 | (AAC)3→2 | coding (649‑651/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014063 = | 3 (0.010) | 291 (1.310) | 106/134 | 0.1 | 99.0% | coding (644/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014059 | 3 (0.010) | coding (640/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
Only 100 of 346 total aligned reads displayed.
GCCTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAG > REL606/3013984‑3014133 | gCCTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAg < 1:866126/76‑1 (MQ=255) cTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGac < 1:4842275‑M2/76‑3 (MQ=255) cTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGac > 1:7773735‑M2/1‑74 (MQ=255) cTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGac < 1:3445341‑M2/76‑3 (MQ=255) cTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGac > 2:1733743‑M2/1‑74 (MQ=255) tttGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGaca > 1:44582‑M2/1‑73 (MQ=255) tttGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGaca > 2:2402436‑M2/1‑73 (MQ=255) ttGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaa > 2:6551113‑M2/1‑72 (MQ=255) tGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaac > 2:3492695‑M2/1‑71 (MQ=255) gCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaaca > 1:2338238‑M2/1‑70 (MQ=255) gCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaaca > 1:2620230‑M2/1‑70 (MQ=255) gCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaaca > 2:1674329‑M2/1‑70 (MQ=255) gCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaaca > 1:5694546‑M2/1‑70 (MQ=255) gCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaaca < 1:5921152‑M2/76‑7 (MQ=255) cAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaa > 1:1586443‑M2/1‑69 (MQ=255) aGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaac > 1:6727951‑M2/1‑68 (MQ=255) gAAACGGAGAGGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacg > 1:4505392‑M2/1‑67 (MQ=255) aaaCGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgt > 2:2060026‑M2/1‑66 (MQ=255) aCGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttc < 2:2224182‑M2/76‑13 (MQ=255) cGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttct > 1:4920649‑M2/1‑63 (MQ=255) cGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttct < 2:4622770‑M2/76‑14 (MQ=255) ggAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctg > 1:6543363‑M2/1‑62 (MQ=255) gagaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctgg > 2:4293873‑M2/1‑61 (MQ=255) agaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctgga < 1:836486‑M2/76‑17 (MQ=255) agaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctgga < 1:1316471‑M2/76‑17 (MQ=255) agaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctgga > 1:1659094‑M2/1‑60 (MQ=255) gaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggat > 2:2713279‑M2/1‑59 (MQ=255) gaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggat > 2:4786150‑M2/1‑59 (MQ=255) gaTGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggat < 2:409023‑M2/76‑18 (MQ=255) gtgGAAAAGGGCCGGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggat > 1:140597‑M2/2‑59 (MQ=255) ggAAAAAGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGTAATTGCTCTCTTATCAAGacaataacgttctggatcca > 2:6168249‑M2/1‑56 (MQ=255) gAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccac < 2:7653144‑M2/76‑22 (MQ=255) gAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccac > 2:7536732‑M2/1‑55 (MQ=255) aaaaGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccaca > 2:522501‑M2/1‑54 (MQ=255) aaaGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacag < 2:7993869‑M2/76‑24 (MQ=255) gCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcac > 2:3938794‑M2/1‑49 (MQ=255) cACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcaca < 2:3223324‑M2/76‑29 (MQ=255) cG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacagg < 1:2012008‑M2/76‑31 (MQ=255) cG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacagg > 2:2526737‑M2/1‑46 (MQ=255) cG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacagg > 2:12805‑M2/1‑46 (MQ=255) cG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacagg > 1:982096‑M2/1‑46 (MQ=255) g‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggc > 1:101061‑M2/1‑45 (MQ=255) g‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggc < 1:3059910‑M2/76‑32 (MQ=255) g‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacagccacaggc > 2:4343328‑M2/1‑45 (MQ=255) aGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcaca > 1:3365333‑M2/1‑42 (MQ=255) cGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacagg < 2:4942490‑M2/76‑37 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggc < 1:4099624‑M2/76‑38 (MQ=255) gTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggc < 2:8106888‑M2/76‑38 (MQ=255) cTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcgg < 1:430868‑M2/76‑40 (MQ=255) cTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcgg < 1:6946902‑M2/76‑40 (MQ=255) tGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggc < 1:2589454‑M2/76‑41 (MQ=255) tgaCGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcg > 2:5822053‑M2/2‑35 (MQ=255) ggACGCCAGCAAAGGGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcg > 1:3586654‑M2/1‑35 (MQ=255) cGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagc > 1:3930369‑M2/1‑32 (MQ=255) cGCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagc < 2:7152414‑M2/76‑45 (MQ=255) gCCAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagca < 1:5286783‑M2/76‑46 (MQ=255) cAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacg < 2:3750779‑M2/76‑48 (MQ=255) cAGCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacg < 2:68892‑M2/76‑48 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgtt < 1:6841206‑M2/76‑50 (MQ=255) gCAAAGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgtt > 1:6012005‑M2/1‑27 (MQ=255) aaaTCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag > 2:5044354‑M2/1‑25 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag < 1:5258344‑M2/76‑52 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag < 2:6970705‑M2/76‑52 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag < 2:3048175‑M2/76‑52 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag < 1:3778342‑M2/76‑52 (MQ=255) aaaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttag > 1:5450759‑M2/1‑25 (MQ=255) aaGCGGAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagt > 2:731850‑M2/1‑24 (MQ=255) ggAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtggat < 1:191413‑M2/76‑57 (MQ=255) ggAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaat > 1:363083‑M2/1‑20 (MQ=255) ggAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaat > 2:525186‑M2/1‑20 (MQ=255) gAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaata < 2:6798758‑M2/76‑58 (MQ=255) gAATTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaata > 2:3811680‑M2/1‑19 (MQ=255) aaTTGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcgcaggcggcgagcacgttagtgaataa < 2:1130328‑M2/76‑59 (MQ=255) ttGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgc < 1:504462‑M2/76‑61 (MQ=255) tGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgct < 2:7760197‑M2/76‑62 (MQ=255) tGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgct < 2:836075‑M2/76‑62 (MQ=255) tGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgct < 1:8128186‑M2/76‑62 (MQ=255) tGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgct < 2:1555629‑M2/76‑62 (MQ=255) tGCTCTCTTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaataagct < 2:6687406‑M2/76‑62 (MQ=255) ctctctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctga < 1:2254746‑M2/76‑64 (MQ=255) tctctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgat < 1:5008785‑M2/76‑65 (MQ=255) tctccTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgat > 2:1845764‑M2/1‑12 (MQ=255) ctctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatg < 1:3985117‑M2/76‑66 (MQ=255) ctctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgccgatg < 1:7285391‑M2/76‑66 (MQ=255) tctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgg > 2:6500006‑M2/1‑10 (MQ=255) ctTATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatggg < 2:6046372‑M2/76‑68 (MQ=255) tATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcc > 1:7900949‑M2/1‑7 (MQ=255) tATCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggcc < 1:2881863‑M2/76‑70 (MQ=255) tATCAAGacaacaacgttctggatccacaggcacaggcacaggcggagagcacgttagtgaataatcttatgggca < 2:641428‑M2/76‑70 (MQ=255) aTCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaataagcacatgggcca < 2:2957000‑M2/76‑71 (MQ=255) tCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatggggcag < 1:6366406‑M2/76‑72 (MQ=255) tCAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccag > 2:5549660‑M2/1‑5 (MQ=255) cAAGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccaga > 1:7534898‑M2/1‑4 (MQ=255) aaGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatggggcagaa < 2:1091217‑M2/76‑74 (MQ=255) aaGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaa > 1:3846946‑M2/1‑3 (MQ=255) aaGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacggtagtgaatacgctgatggggcagaa < 1:2669621‑M2/76‑74 (MQ=255) aGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatggggcagaag < 2:4672392‑M2/76‑75 (MQ=255) aGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaag > 1:6287867‑M2/1‑2 (MQ=255) aGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaag > 1:6252748‑M2/1‑2 (MQ=255) aGacaacaacgttctggatccacaggcacaggcacaggcggcgagcacgttagtgaatacgctgatgggccagaag > 1:4419661‑M2/1‑2 (MQ=255) | GCCTTTGCAGAAACGGAGATGGAAAAGGCACG‑CCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAG > REL606/3013984‑3014133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |