| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2066317 = | 274 (1.140) | 4 (0.020) | 4/128 | 17.3 | 1.8% | coding (287/840 nt) | wcaA | predicted glycosyl transferase |
| ? | REL606 | = 2066313 | 213 (1.040) | coding (291/840 nt) | wcaA | predicted glycosyl transferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2066402‑2066317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgatgatgaATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTAA < REL606/2066313‑2066239 GACATTAGCAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCG < 2:6657107/76‑1GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCG < 1:6255104/76‑1GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCG < 2:1734217/76‑1GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCG > 1:7922535/1‑76GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCG < 2:2069552/76‑1 CATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGcc < 2:290444/76‑3 CATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGAT > 1:7577351/1‑76 ATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGcca < 2:1309349/76‑4 ATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATa < 2:5487226/76‑2 ATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATG > 2:3936122/1‑76 ATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATG > 1:5311301/1‑76 TTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGA > 1:1402689/1‑76 TTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGA > 2:3686367/1‑76 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT > 2:4686538/1‑76 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT > 2:5216390/1‑76 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT > 2:2330824/1‑76 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT > 2:6160968/1‑76 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT < 2:6185892/76‑1 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT < 2:7237161/76‑1 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT < 2:7390916/76‑1 TAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGAT > 2:1146958/1‑76 AACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTTGCGCAAGGGGAATATATCACCGGGATCGATGATG > 1:2543907/1‑76 AACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATG > 1:6836935/1‑76 ACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGA > 2:6111034/1‑76 CAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGAT < 1:369958/76‑1 CAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGAT < 1:1725659/76‑1 CAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGAT > 2:4443491/1‑76 AGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATG > 2:4139625/1‑76 AGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATG > 1:7734926/1‑76 AGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATG > 2:7572650/1‑76 GCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGA < 2:4264231/76‑1 GCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGA < 1:1138683/76‑1 CCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGAATGGACACCCAACCGTCTGAGC < 2:1324878/76‑1 CGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGAATGGACACCCAACCGTCTGAGCGTCTT < 2:6721605/76‑1 ATATCACCGGGATCGATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGT > 2:5136167/1‑76 CGGGATCGATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACAC < 2:430109/76‑1 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT > 1:6321970/1‑76 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT < 2:4548881/76‑1 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT > 1:4539218/1‑76 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT > 1:3946545/1‑76 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT > 2:2490881/1‑76 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT < 2:5219533/76‑1 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT < 1:3162151/76‑1 GATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTT > 1:1414710/1‑76 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 2:3898284/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 2:5899684/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 2:752625/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 1:819647/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT > 2:1045613/1‑76 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT > 1:162653/1‑76 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT > 1:2292259/1‑76 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT > 1:704057/1‑76 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 1:27978/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT < 1:3897439/76‑1 ATGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTT > 1:4426777/1‑76 TGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTG > 1:1340349/1‑76 TGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTG > 2:7035655/1‑76 TGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTG < 2:7035354/76‑1 TGATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTG > 1:3868547/1‑76 GATGATGAATGGACACCCAACCGTCTGAGAGTCTTCCTCGCCCATAAACAGCAACTGGTCACACCCGCCTTTTTGT > 2:8250/1‑76 ATGATGAATGGACCCCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA < 1:3599329/76‑1 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 2:1348189/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 2:1392299/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 1:4746203/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA < 1:7794951/76‑1 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 1:1873434/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 1:2268280/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA > 2:6380127/1‑76 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTA < 2:3705650/76‑1 ATGATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCACCCATAAACAGCAACTGGTCACAAACGCCTTTTTGTA > 1:1317979/1‑76 GATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACG < 1:7840622/76‑1 GATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACG < 1:6678518/76‑1 ATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGC > 1:573371/1‑76 ATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGC > 1:3256081/1‑76 ATGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGACACACACGCCTTTTTGTACGC > 1:1533276/1‑76 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT < 2:6437943/76‑1 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT < 2:6948852/76‑1 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT < 1:6429093/76‑1 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT > 1:4525058/1‑76 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT > 1:1132490/1‑76 TGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCT < 1:5513122/76‑1 GAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTA > 1:752272/1‑76 GAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTA < 1:6580780/76‑1 GAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTA < 2:6850349/76‑1 GAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTA < 1:5564085/76‑1 GAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTA < 2:4159688/76‑1 AATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTAA < 1:3159906/76‑1 GACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATCGATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2066402‑2066317‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgatgatgaATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTAA < REL606/2066313‑2066239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |