| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2066317 = | 274 (1.140) | 4 (0.020) | 4/128 | 17.3 | 1.8% | coding (287/840 nt) | wcaA | predicted glycosyl transferase |
| ? | REL606 | = 2066313 | 213 (1.040) | coding (291/840 nt) | wcaA | predicted glycosyl transferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 273 total aligned reads displayed.
GTTAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGC > REL606/2066238‑2066387 | gTTAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCAt < 2:6231418/76‑1 (MQ=255) ttAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCAtt > 1:3159906/1‑76 (MQ=255) tAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtc < 1:752272/76‑1 (MQ=255) tAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtc > 1:6580780/1‑76 (MQ=255) aGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtca < 1:1132490/76‑1 (MQ=255) aGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtca > 1:6429093/1‑76 (MQ=255) aGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtca > 1:5513122/1‑76 (MQ=255) aGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtca > 2:6948852/1‑76 (MQ=255) aGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtca < 1:4525058/76‑1 (MQ=255) gCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcat < 1:573371/76‑1 (MQ=255) gCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcat < 1:3256081/76‑1 (MQ=255) tACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcat < 1:2268280/76‑1 (MQ=255) tACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcat < 2:1392299/76‑1 (MQ=255) tACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcat < 2:1348189/76‑1 (MQ=255) tACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcat < 2:6380127/76‑1 (MQ=255) tACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcat < 1:4746203/76‑1 (MQ=255) cAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatca < 1:1340349/76‑1 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat < 1:704057/76‑1 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat < 2:1045613/76‑1 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat < 1:162653/76‑1 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat > 1:3897439/1‑76 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat > 1:27978/1‑76 (MQ=255) aaaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcat > 2:752625/1‑76 (MQ=255) aaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcatc < 1:1414710/76‑1 (MQ=255) aaaaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATtcatcatcatc < 1:6321970/76‑1 (MQ=255) aaGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTcatcatcatcat < 2:7484783/76‑1 (MQ=255) ggCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCg < 2:3370518/76‑1 (MQ=255) gCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGa < 1:1730775/76‑1 (MQ=255) cGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGAt < 1:4943361/76‑1 (MQ=255) cGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGAt > 2:2255346/1‑76 (MQ=255) cGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGAt > 1:2510094/1‑76 (MQ=255) gtgtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATccc < 2:4183820/76‑1 (MQ=255) gtgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCgg > 2:5239967/1‑76 (MQ=255) tgACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGt < 1:293669/76‑1 (MQ=255) gACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTg > 2:5409441/1‑76 (MQ=255) gACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTg < 2:7161653/76‑1 (MQ=255) aCCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGa < 1:262288/76‑1 (MQ=255) ccAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGat < 1:5646074/76‑1 (MQ=255) cAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGata < 2:2404128/76‑1 (MQ=255) cAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGata < 1:4608140/76‑1 (MQ=255) aGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatat < 1:816351/76‑1 (MQ=255) aGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatat > 1:7850873/1‑76 (MQ=255) aGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatat < 2:6565491/76‑1 (MQ=255) gTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGatata < 2:1888930/76‑1 (MQ=255) tGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATAtt < 2:6830819/76‑1 (MQ=255) tGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATAtt > 1:1529053/1‑76 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGTTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc < 2:736809/76‑1 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc < 2:4804683/76‑1 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc > 2:6443733/1‑76 (MQ=255) gCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTc > 1:1985807/1‑76 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt < 2:4035831/76‑1 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 1:5097243/1‑76 (MQ=255) tttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCt > 1:211505/1‑76 (MQ=255) ttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCtt > 2:1275308/1‑76 (MQ=255) ttATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCtt < 1:7235459/76‑1 (MQ=255) tATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTg < 1:3448835/76‑1 (MQ=255) tGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTgcg > 2:2679396/1‑76 (MQ=255) gggCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTgcgc > 2:2762218/1‑76 (MQ=255) gCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCa > 1:1880768/1‑76 (MQ=255) gCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCa < 2:3759865/76‑1 (MQ=255) gAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGCGATATATTCCCCTTGCGCCAGc > 1:4012936/1‑76 (MQ=255) gAGGAAGACGCTCAGACGGTTGGGGGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGc > 2:678062/1‑76 (MQ=255) aGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCa > 2:6299240/1‑76 (MQ=255) aGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCa < 2:165817/76‑1 (MQ=255) ggAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCAt < 2:5500322/76‑1 (MQ=255) gAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATa > 2:576862/1‑76 (MQ=255) gAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATa < 2:5918631/76‑1 (MQ=255) aaGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATaa < 2:6705950/76‑1 (MQ=255) aGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAAt < 2:4907062/76‑1 (MQ=255) aGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAAt > 2:6863451/1‑76 (MQ=255) aGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAAt > 2:68079/1‑76 (MQ=255) aCGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCg < 2:5795364/76‑1 (MQ=255) aCGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCg > 1:5288217/1‑76 (MQ=255) aCGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCg > 2:868626/1‑76 (MQ=255) cTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCt > 1:1246246/1‑76 (MQ=255) cTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCt < 1:7744447/76‑1 (MQ=255) tCAGCCGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGAGACATGTTCCCCTTGCGCCAGCATAATATCCTg > 2:4558225/1‑76 (MQ=255) cAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTgg > 1:7905136/1‑76 (MQ=255) aGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGt > 2:7634307/1‑76 (MQ=255) gACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGtt < 1:4680758/76‑1 (MQ=255) gACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGtt < 1:384035/76‑1 (MQ=255) gACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGtt > 2:2355203/1‑76 (MQ=255) gACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGtt < 2:3052242/76‑1 (MQ=255) aCGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTa < 2:1194981/76‑1 (MQ=255) cGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTAc < 1:7314963/76‑1 (MQ=255) ggTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACg > 1:3402760/1‑76 (MQ=255) gTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGt > 1:6459402/1‑76 (MQ=255) gTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGt > 1:6060949/1‑76 (MQ=255) tGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTAc < 1:6902635/76‑1 (MQ=255) ggTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACcg > 2:147999/1‑76 (MQ=255) ggTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACcg > 2:906240/1‑76 (MQ=255) gtCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCgcgc > 1:6681074/1‑76 (MQ=255) tCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCa < 1:4245730/76‑1 (MQ=255) tCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCa < 1:3078456/76‑1 (MQ=255) ccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCAc > 1:4828211/1‑76 (MQ=255) ccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCAc > 1:762971/1‑76 (MQ=255) ccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCAc > 2:779108/1‑76 (MQ=255) ccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCAc > 2:7947420/1‑76 (MQ=255) ccATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCAc < 2:5117907/76‑1 (MQ=255) cATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACg < 2:536850/76‑1 (MQ=255) | GTTAGCGTACAAAAAGGCGTGTGTGACCAGTTGCTGTTTATGGGCGAGGAAGACGCTCAGACGGTTGGGTGTCCATTCATCATCATCATCGATCCCGGTGATATATTCCCCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGC > REL606/2066238‑2066387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |