| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1425651 = | 57 (0.240) | 5 (0.020) | 3/132 | 18.3 | 3.4% | coding (213/267 nt) | ynaE | predicted DNA‑binding transcriptional regulator |
| ? | REL606 | = 1600638 | 234 (1.110) | intergenic (‑586/‑167) | ydfJ/ydfK | predicted transporter/predicted DNA‑binding transcriptional regulator | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 266 total aligned reads displayed.
TGAAACGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTCATG > REL606/1600563‑1600713 | tGAAACGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACAt > 1:4615422/1‑76 (MQ=34) gAAACGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACAtt < 1:6886629/76‑1 (MQ=34) gAAACGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACAtt > 2:3451506/1‑76 (MQ=34) aaaCGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATta < 1:6045107/76‑1 (MQ=34) aaaCGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATta < 2:4849160/76‑1 (MQ=34) aaaCGACAATGTTTAACTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATta > 2:5854218/1‑76 (MQ=255) aCGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATtaat < 1:1374345/76‑1 (MQ=38) aCGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATtaat < 1:2897772/76‑1 (MQ=38) cGACAATGTTTATCTACGAACTTTAAGAACACCCTAGATAAAAATCGTCAACTATATCATATATAACACATtaata < 2:6354397/76‑1 (MQ=255) cGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATtaata < 2:175660/76‑1 (MQ=39) gACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATtaataa < 2:277823/76‑1 (MQ=39) aCAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTaataat < 2:3517756/76‑1 (MQ=39) aaTGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTc > 1:5223703/1‑76 (MQ=39) aTGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCg < 2:863075/76‑1 (MQ=39) aTGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCg > 1:611998/1‑76 (MQ=39) gTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAg < 2:3666281/76‑1 (MQ=39) gTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAg > 2:378626/1‑76 (MQ=39) gTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAg < 2:5601572/76‑1 (MQ=39) tttATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAgg > 2:3278697/1‑76 (MQ=39) tttATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAgg > 1:1240158/1‑76 (MQ=39) ttATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGc < 1:1732190/76‑1 (MQ=39) tATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCt < 2:7066210/76‑1 (MQ=39) aTCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCta > 2:1507346/1‑76 (MQ=39) aTCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCta > 1:191867/1‑76 (MQ=39) cTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCtata > 1:768566/1‑76 (MQ=39) cTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCtata > 1:1118471/1‑76 (MQ=39) tACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTatat < 1:7102920/76‑1 (MQ=39) tACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTatat < 1:6009745/76‑1 (MQ=39) aCGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATg < 2:7928700/76‑1 (MQ=255) cGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGa < 1:563264/76‑1 (MQ=255) cGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGa < 1:5961153/76‑1 (MQ=255) cGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGa < 1:669766/76‑1 (MQ=255) gAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGaa > 1:3507227/1‑76 (MQ=255) gAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGaa < 2:3070766/76‑1 (MQ=255) gAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGaa < 2:11116/76‑1 (MQ=255) aCTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACa < 2:5042494/76‑1 (MQ=255) cTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAg < 1:623098/76‑1 (MQ=255) cTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAg > 1:1840369/1‑76 (MQ=255) tAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCAt > 1:5051388/1‑76 (MQ=255) tAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCAt < 1:3823945/76‑1 (MQ=255) aaGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATa < 2:404667/76‑1 (MQ=255) aaGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATa < 2:3897381/76‑1 (MQ=255) aaGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATa > 1:3123570/1‑76 (MQ=255) aaGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATa < 2:6278910/76‑1 (MQ=255) aGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATAc > 1:2433445/1‑76 (MQ=255) aGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATAc > 1:2805482/1‑76 (MQ=255) gAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACt > 2:3762735/1‑76 (MQ=255) gAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACt < 1:4892190/76‑1 (MQ=255) gAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACt < 2:1151003/76‑1 (MQ=255) acacCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGa < 2:5928059/76‑1 (MQ=255) acCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATa < 2:2938853/76‑1 (MQ=39) acCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATa < 2:4414295/76‑1 (MQ=39) acCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATa > 2:2661495/1‑76 (MQ=39) cAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATc < 1:2332578/76‑1 (MQ=39) cAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATc < 1:3908142/76‑1 (MQ=39) aaGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCa > 1:5606490/1‑76 (MQ=39) gATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACt < 1:6773567/76‑1 (MQ=39) aTAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACtt < 2:6606215/76‑1 (MQ=39) aTAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACtt > 1:4370837/1‑76 (MQ=39) tAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTtc > 1:6750276/1‑76 (MQ=39) aaaaaTCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTtct > 1:444772/1‑76 (MQ=39) aaaTCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTtctct < 2:2107380/76‑1 (MQ=39) aaaTCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTtctct < 2:5220326/76‑1 (MQ=39) tCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCt > 2:5818250/1‑76 (MQ=38) tCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCt < 1:1032557/76‑1 (MQ=38) cGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCtt < 1:1210257/76‑1 (MQ=35) cGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCtt < 2:2304440/76‑1 (MQ=35) cGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCtt < 2:7461499/76‑1 (MQ=35) gTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTa < 2:6520006/76‑1 (MQ=34) tCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTAt < 2:7267100/76‑1 (MQ=34) tCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTAt < 1:7568184/76‑1 (MQ=34) tCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTAt < 2:4974012/76‑1 (MQ=34) cAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATc > 1:3150263/1‑76 (MQ=34) cAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATc > 2:6917459/1‑76 (MQ=34) aaCTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCa < 1:7942494/76‑1 (MQ=34) aCTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCat < 2:3124216/76‑1 (MQ=34) atatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATAtt < 2:165783/76‑1 (MQ=34) atatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATAtt > 2:7551000/1‑76 (MQ=34) atatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATAtt < 2:5322477/76‑1 (MQ=34) atatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATAtt > 1:7072706/1‑76 (MQ=34) tatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTc < 2:7848366/76‑1 (MQ=34) tatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTc < 2:211499/76‑1 (MQ=34) tatCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTc > 1:3722706/1‑76 (MQ=34) atCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCa < 2:4262369/76‑1 (MQ=34) atCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCa < 2:6157595/76‑1 (MQ=34) tCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAg > 2:5270918/1‑76 (MQ=34) tCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAg < 1:7256521/76‑1 (MQ=34) cATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGc > 2:6725593/1‑76 (MQ=34) cATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGc < 2:4661285/76‑1 (MQ=34) tatataACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTGTCATATTCAGCAt > 1:5475824/1‑76 (MQ=21) tatataACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCAt > 1:778135/1‑76 (MQ=34) atataACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCAtt > 1:53428/1‑76 (MQ=34) atataACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCAtt > 1:4740380/1‑76 (MQ=34) aaCACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTa < 2:6750163/76‑1 (MQ=34) cacaTTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGt < 1:3236559/76‑1 (MQ=34) acaTTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTc > 1:6508364/1‑76 (MQ=34) acaTTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTc > 1:2694471/1‑76 (MQ=34) caTTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTCa > 1:899958/1‑76 (MQ=34) ttAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTCATg < 1:7400277/76‑1 (MQ=34) ttAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTCATg > 2:4056790/1‑76 (MQ=34) | TGAAACGACAATGTTTATCTACGAACTTTAAGAACACCCAAGATAAAAATCGTCAACTATATCATATATAACACATTAATAATTCGAGGCTATATGAACAGCATACTGATAATCACTTCTCTCCTTATCATATTCAGCATTTTTAGTCATG > REL606/1600563‑1600713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |