| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 407 (1.320) | 131/146 | 0.0 | 99.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3015771 = | 2 (0.010) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
| * | ? | REL606 | = 3015773 | 2 (0.010) | 466 (1.490) | 129/148 | 0.0 | 99.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 472 total aligned reads displayed.
CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775801‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > REL606/3015771‑3015845 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:6972632/1‑76CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 2:8661436/1‑76CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 2:5849318/76‑1CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:9991523/76‑1CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:2566336/1‑76CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 2:2732056/76‑1CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 2:1891295/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 2:9832302/1‑76 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:4327055/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:7462056/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:8849289/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:3036351/1‑76 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 2:4220389/1‑76 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC < 2:341808/76‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC > 2:129153/1‑76 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAC < 1:4452015/76‑1 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACT > 1:8236418/1‑76 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTT > 1:9890644/1‑76 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTT > 2:5631164/1‑76 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTT > 2:5739241/1‑76 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTT > 1:6633398/1‑76 CAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTT > 1:608841/1‑76 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTC < 2:4624100/76‑1 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTC > 1:1144456/1‑76 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTC > 1:4560590/1‑76 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTG > 1:9732928/1‑76 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC > 1:5848955/1‑76 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG > 1:8394320/1‑76 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT > 2:2284292/1‑76 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT < 2:10149561/76‑1 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC > 1:6521527/1‑76 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:2126410/76‑1 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGACCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTC < 1:2214926/76‑1 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC > 2:2955810/1‑76 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATC > 2:5196094/1‑76 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC < 2:6004724/76‑1 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC > 2:4016523/1‑76 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCC < 1:937273/76‑1 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACC > 1:5292828/1‑76 TTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCA < 1:2726123/76‑1 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA > 1:6481367/1‑76 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA > 1:3556206/1‑76 TGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA > 1:5580535/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 2:6349223/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 1:3173443/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 1:9020711/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 1:8552017/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG < 1:7251919/76‑1 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAA < 2:550105/76‑1 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:440591/1‑76 TATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:2005191/1‑76 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGA > 1:2446058/1‑76 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGA > 1:7852540/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA > 2:5441155/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA > 2:9057311/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA < 1:7665297/76‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA > 1:9586369/1‑76 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTTATCCACCAAAGAAGAAGCC > 2:320013/1‑76 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG < 2:4270331/76‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG > 1:2864303/1‑76 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCT < 1:4839990/76‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCT > 2:9570922/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG > 2:2129713/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG < 1:6235065/76‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG > 1:5174705/1‑76 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCG > 1:3887543/1‑76 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCG < 2:3646151/76‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCG < 2:7997457/76‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCG > 2:444495/1‑76 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCG > 2:4793452/1‑76 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGA > 1:9264010/1‑76 ATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAAT > 1:4064867/1‑76 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCA > 2:3786660/1‑76 TCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCA < 1:8447338/76‑1 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAG > 2:7650901/1‑76 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAG < 1:6835634/76‑1 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGG < 2:1386161/76‑1 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGG < 2:8255067/76‑1 CGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAG < 1:10084548/76‑1 GTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGG < 1:6366665/76‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGC < 1:8015478/76‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGC > 1:3441152/1‑76 CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCA > 2:9265314/1‑76 ACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAA > 2:4997891/1‑76 aAAAATGGGGGCAGTACCTTTCCTGCCCAGTCATCCCCCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAAC < 2:6711790/75‑1 AATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGA < 2:1230577/76‑1 ATGGGTGCAGTCCCCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGAT < 2:8517030/76‑1 ATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGAT > 1:1430556/1‑76 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATC > 2:1584510/1‑76 TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATC > 2:6893748/1‑76 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCA > 1:5945516/1‑76 GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAG > 2:6566799/1‑76 GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGC > 2:1167018/1‑76 TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCC > 1:9479556/1‑76 GCAGTACCCTTTCTGCCTGGTCATCCACCAAAAAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCG < 1:3789907/76‑1 GCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCG > 2:5068493/1‑76 TACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTT < 1:2373035/76‑1 TACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTT > 1:1705087/1‑76 ACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTG > 2:8865535/1‑76 ACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > 2:7693408/1‑76 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775801‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > REL606/3015771‑3015845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |