| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 407 (1.320) | 131/146 | 0.0 | 99.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3015771 = | 2 (0.010) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
| * | ? | REL606 | = 3015773 | 2 (0.010) | 466 (1.490) | 129/148 | 0.0 | 99.6% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 302 total aligned reads displayed.
TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGC > REL606/2775804‑2775952 | ttCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAgg < 2:6196908/76‑1 (MQ=31) tCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGt < 2:8823169/76‑1 (MQ=32) tCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGt > 2:6724802/1‑76 (MQ=32) tCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGt < 1:3979203/76‑1 (MQ=32) cAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGtt > 2:338223/1‑76 (MQ=34) aaaGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGa > 2:3718946/1‑76 (MQ=38) aaaGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGa > 1:2817146/1‑76 (MQ=38) aaGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt < 2:8948679/76‑1 (MQ=39) aaGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGAt > 2:2246882/1‑76 (MQ=39) aGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATa > 1:10180780/1‑76 (MQ=40) aGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATa > 2:9833699/1‑76 (MQ=40) gggTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAg < 1:8697069/76‑1 (MQ=255) gggTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAg < 1:8058854/76‑1 (MQ=255) gggTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAg < 2:4021385/76‑1 (MQ=255) ggTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGa > 2:10046637/1‑76 (MQ=255) gTATTTTGGTTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGaa > 1:9125317/1‑76 (MQ=255) gTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGaa > 2:5236410/1‑76 (MQ=255) tATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGaaa < 1:6406950/76‑1 (MQ=255) aTTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAat < 2:7217266/76‑1 (MQ=255) aTTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAat < 1:3096735/76‑1 (MQ=255) ttttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAata > 1:4653399/1‑76 (MQ=255) ttttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAata > 1:9182633/1‑76 (MQ=255) ttttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAata < 2:8637572/76‑1 (MQ=255) tttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAatat > 2:9227638/1‑76 (MQ=255) ttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATc > 1:3890315/1‑76 (MQ=255) ttGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATc > 2:6854328/1‑76 (MQ=255) tGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCg < 1:4513919/76‑1 (MQ=255) ggCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGc > 1:9944530/1‑76 (MQ=255) ggCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGc > 1:1688760/1‑76 (MQ=255) cTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCt > 2:2080840/1‑76 (MQ=255) gACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTgggg < 1:3347309/76‑1 (MQ=255) aCATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc > 2:1922153/1‑76 (MQ=255) aCATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc < 2:4606997/76‑1 (MQ=255) aCATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc > 1:6579730/1‑76 (MQ=255) aCATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGc > 2:5018528/1‑76 (MQ=255) cATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCt > 2:2905763/1‑76 (MQ=255) atatTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt > 2:4126122/1‑76 (MQ=255) atatTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCtt > 1:2706018/1‑76 (MQ=255) tatTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCttt > 1:5478676/1‑76 (MQ=255) atTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCtttt > 2:3110228/1‑76 (MQ=255) atTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCtttt > 1:2593029/1‑76 (MQ=255) ttAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCCGCACAGGTTGATAGAAATTTGGCCTGGGGCTTTTg > 2:2390056/1‑76 (MQ=21) ttAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:10057281/1‑76 (MQ=255) tAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 2:6551525/1‑76 (MQ=255) tAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 1:4940857/1‑76 (MQ=255) aGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc > 1:2316314/1‑76 (MQ=255) aGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc > 2:1141485/1‑76 (MQ=255) ggCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt < 1:519593/76‑1 (MQ=255) ggCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt < 2:7120663/76‑1 (MQ=255) gCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATc < 1:633489/76‑1 (MQ=255) cTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCt > 2:6266773/1‑76 (MQ=255) tATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg < 2:1665381/76‑1 (MQ=255) tATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg > 1:3669097/1‑76 (MQ=255) aTTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTgg < 1:1357400/76‑1 (MQ=255) ttCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGa < 1:5836583/76‑1 (MQ=255) ccATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAAc > 1:2078276/1‑76 (MQ=255) ccATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAAc < 1:7224893/76‑1 (MQ=255) aTTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCt > 1:6219641/1‑76 (MQ=255) aTTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCt < 2:8186618/76‑1 (MQ=255) tttCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTc < 1:8312569/76‑1 (MQ=255) tCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgc < 1:5726302/76‑1 (MQ=255) cATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgcg > 1:4129021/1‑76 (MQ=255) tCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa < 2:261006/76‑1 (MQ=255) tCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa < 2:2679119/76‑1 (MQ=255) cGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt > 1:1892078/1‑76 (MQ=255) gTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATg > 2:3982975/1‑76 (MQ=255) ccAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCt > 2:2747184/1‑76 (MQ=255) caacaaAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCtt < 2:9511037/76‑1 (MQ=255) aacaaAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa < 1:437564/76‑1 (MQ=255) aacaaAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa > 2:7557464/1‑76 (MQ=255) aacaaAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa < 2:5322107/76‑1 (MQ=255) acaaAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTaa < 2:7815469/76‑1 (MQ=255) aaaTGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGc > 1:4053416/1‑76 (MQ=255) aTGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa < 1:3242901/76‑1 (MQ=255) aTGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa > 2:4961759/1‑76 (MQ=255) aTGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa < 2:1790287/76‑1 (MQ=255) aTGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa < 1:7666124/76‑1 (MQ=255) gggTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGa < 1:5595066/76‑1 (MQ=255) ggTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAc > 2:4301719/1‑76 (MQ=255) tGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg < 1:1175873/76‑1 (MQ=255) tGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg < 1:8500180/76‑1 (MQ=255) gCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGc < 2:8527543/76‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 1:6524371/76‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 1:966055/76‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 1:7172268/76‑1 (MQ=255) aGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 2:5594044/76‑1 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTc > 2:6962180/1‑76 (MQ=255) gTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTc > 2:872959/1‑76 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa < 1:599200/76‑1 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa > 1:8267505/1‑76 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa > 1:7047619/1‑76 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa < 2:1403511/76‑1 (MQ=255) tACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa < 1:9965684/76‑1 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCaa > 2:5907408/1‑76 (MQ=255) aCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCaa > 2:573210/1‑76 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAg < 1:7078758/76‑1 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAg < 1:8958391/76‑1 (MQ=255) cAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAg < 1:9430400/76‑1 (MQ=255) aGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGc < 2:3578185/76‑1 (MQ=255) aGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGc > 1:7003615/1‑76 (MQ=255) | TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGC > REL606/2775804‑2775952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |