| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 135986 | 231 (0.950) | 3 (0.010) | 3/134 | 17.0 | 1.4% | coding (1568/2598 nt) | acnB | aconitate hydratase |
| ? | REL606 | = 3060774 | 210 (0.960) | coding (409/1173 nt) | ECB_02854 | conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/135906‑135986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcgtGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAAC < REL606/3060774‑3060700 tgcCTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACT < 1:5705585/73‑1TGACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACT > 2:7161472/1‑76 gcCTCCCATCCCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCGGGTGGCGTTTGCTGCCGCAACTG < 2:6411233/74‑1 GACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGGTCTGGTCTGGTGGCGGTTGCTGCCGCAACct > 1:1435496/1‑74 cCTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGG < 1:1715706/75‑1 ACTCCCATCCCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGG < 1:5639184/76‑1 CTCCCATCCCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGC < 1:575448/76‑1 CTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGGGGCGTTTGCTGCCGCAACTGGC > 1:1287841/1‑76 CTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGGTCTGGTCTGGGGGGGTTTGCTGCCGCAACTGGC > 1:397278/1‑76 TCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGGTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCG > 2:6853801/1‑76 CCCATCCCCGTTCCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT < 2:1739733/76‑1 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT > 2:7431039/1‑76 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT > 2:1909878/1‑76 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT > 2:2413052/1‑76 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT > 2:2782394/1‑76 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGGTTTGGTCTGGGGGCGTTTGCTGCCGCAACCGGCGT > 2:3147197/1‑76 CCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGGTCTGGTCTGGTGGCGGTTGCTGCCGCAACCGGCGT > 1:621871/1‑76 ATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCCACTGGCGTGac > 1:1803771/1‑74 ATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGGGGCGTTTGCTGCCGCAACTGGCGTcat > 2:5033950/1‑73 TGGTGGCGTTTGCTGCCGCAACTGGCGTGGCTGTCGGCATCCAG > 1:96408/1‑44 TGGTGGCGTTTCCTGCCGCAACTGGCGTGGCTGTCGGCATCCAG < 2:96408/44‑1 ACTGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCG < 2:7581653/76‑1 ACTGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCG < 1:1405733/76‑1 CTGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGG > 2:501471/1‑76 CTGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGG > 2:4888766/1‑76 TGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGT > 1:108710/1‑76 TGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGT > 1:7012563/1‑76 TGGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGT < 1:3717494/76‑1 GGCGTGGCTGTCGGCATCCAGTAACACCACGGGGTTATGGTCGGCAAGTGCGCTGATGACGGCTAAATTAGCGGga > 2:221364/1‑74 GGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTA < 2:4196639/76‑1 GGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTA < 1:2044154/76‑1 GGCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTA > 2:1597779/1‑76 ggtTGGTTGTCCTCAGCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTAT < 2:2969956/73‑1 GCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTAT < 1:2721794/76‑1 GCGTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTAT < 1:1388040/76‑1 GCGTGGCTGGCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTAT < 1:6954054/76‑1 CGTGGCGGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATA < 1:7245042/76‑1 GTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAA < 1:400519/76‑1 GTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAA > 1:6339514/1‑76 GTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAA < 1:6448920/76‑1 GTGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAA < 2:832006/76‑1 TGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAAC > 2:4644884/1‑76 TGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAAC > 1:6169029/1‑76 TGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAAC > 1:3226313/1‑76 TGACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/135906‑135986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcgtGGCTGTCGGCATCCAGTAACACCACGGCGTTATGGTCGGCAAGTGCGCTGATGACGCCTAAATTAGCGGTATAAC < REL606/3060774‑3060700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |