| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2056287 | 206 (0.840) | 48 (0.210) +CTTA |
16/142 | 11.0 | 14.4% | intergenic (‑191/+2) | cpsG/cpsB | phosphomannomutase/mannose‑1‑phosphate guanyltransferase |
| ? | REL606 | 4274785 = | 399 (1.630) | intergenic (+58/+473) | gltP/yjcO | glutamate/aspartate:proton symporter/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 207 total aligned reads displayed.
ATCAGGCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTCAA > REL606/2056212‑2056362 | cAGGCTTACAAAACCGAACCGTAGGTCGGATAAGGCTTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGtt < 2:4418515/76‑1 (MQ=255) cAGGCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGtt > 1:4539984/1‑76 (MQ=255) aGGCCTACAAAGCCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGttt < 1:2628014/76‑1 (MQ=255) aGGCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGttt < 2:5463236/76‑1 (MQ=255) ggCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTa < 2:3476038/76‑1 (MQ=255) ggCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTa < 2:3887000/76‑1 (MQ=255) gCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTac > 1:1486873/1‑76 (MQ=255) gCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTac > 1:7470101/1‑76 (MQ=255) ccTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTaca < 2:6150484/76‑1 (MQ=255) tACAAACCCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACAcc < 1:4838454/76‑1 (MQ=255) tACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTacaca < 2:1355175/76‑2 (MQ=255) tACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACAcc > 1:1793998/1‑76 (MQ=255) tACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACAcc > 1:3271831/1‑76 (MQ=255) aCAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACAccc > 2:5577476/1‑76 (MQ=255) cAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACccg > 1:4165571/1‑76 (MQ=255) aaaCCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCTGACAAACAGCGCCTGATGCGACGTTTACACccgtc < 2:382299/76‑1 (MQ=255) aaccgaaccgTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACccgtcc > 2:5309201/1‑76 (MQ=255) ccgaaccgTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACccgtccgt > 2:195599/1‑76 (MQ=255) ccgaaccgTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACccgtccgt > 1:4800892/1‑76 (MQ=255) gaaccgTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAg < 2:4252970/76‑1 (MQ=255) accgTAGGTCGGATAGGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCg < 1:4050065/76‑1 (MQ=255) accgTAGGTCGGATAAGGCTTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCg < 2:4110965/76‑1 (MQ=255) cgTAGGTCGAATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGAt < 2:6258606/76‑1 (MQ=255) gTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATc > 2:6584677/1‑76 (MQ=255) gTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATc < 1:5646960/76‑1 (MQ=255) tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATcc > 1:2563527/1‑76 (MQ=255) tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATcc > 2:2039581/1‑76 (MQ=255) aGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcg > 2:6425285/1‑76 (MQ=255) aGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcg > 2:1878295/1‑76 (MQ=255) gggcGGATAAGTCGTTCCCGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcgc < 2:3429088/73‑1 (MQ=38) ggTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcgc > 1:4770766/1‑76 (MQ=255) ggTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcgc > 1:6693272/1‑76 (MQ=255) gTCGGATAAGGCGTTCACCCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCcgcg > 2:6028175/1‑76 (MQ=255) gcGGATAGGGCGTTCCCGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGa < 2:1563678/75‑1 (MQ=255) gcGGATAAGGCGTTCACGCCGCCTCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGa < 2:2253872/75‑1 (MQ=255) cGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGaa < 2:7751486/76‑1 (MQ=255) ggATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAg < 2:1846910/76‑1 (MQ=255) ggAAAAGGCGTCCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAg < 2:46891/76‑1 (MQ=255) gATAGGGCGTTCACGCCGCATCCGACAAAAAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgc < 1:4745219/76‑1 (MQ=255) gATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgc < 2:7698449/76‑1 (MQ=255) aTAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgcg > 2:3642274/1‑76 (MQ=255) tagggCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgcgc < 2:6808413/73‑1 (MQ=255) tAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgcgc > 2:3083793/1‑76 (MQ=255) tAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAgcgc < 2:6559295/76‑1 (MQ=255) aGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGcac > 2:2867474/1‑76 (MQ=255) cGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGcaccac < 2:6729930/76‑1 (MQ=255) gTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACcaca > 1:3126739/1‑76 (MQ=255) ttCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCAcat > 1:4290917/1‑76 (MQ=255) ttCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCAcat > 2:2475032/1‑76 (MQ=255) tCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCAcatc > 2:4617879/1‑76 (MQ=255) catgccgcATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCAcatca > 1:2806953/4‑76 (MQ=255) gccgcATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATcc > 2:2766224/1‑76 (MQ=255) cgcATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCctc < 1:5250874/76‑1 (MQ=255) ccATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCctct < 1:3496199/75‑1 (MQ=255) cATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCtt < 2:5150742/76‑1 (MQ=255) cATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCtt < 1:7653552/76‑1 (MQ=255) aTCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTc > 1:4310709/1‑76 (MQ=255) tCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCg < 1:4679880/76‑1 (MQ=255) tCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCg < 1:2419800/76‑1 (MQ=255) cGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCgag < 2:5232674/76‑1 (MQ=255) cGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCgag > 1:6925838/1‑76 (MQ=255) aCAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGAt < 1:4926426/76‑1 (MQ=255) cAACCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATa < 1:6425285/76‑1 (MQ=255) cAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATa < 1:208915/76‑1 (MQ=255) aaaaCAGCGCCTGATGCGACGTTTACCCCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATa < 2:2350273/75‑1 (MQ=255) aaaaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATa < 1:2905043/75‑1 (MQ=255) aaccAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATaa < 1:2117835/73‑1 (MQ=255) aaaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATaa < 1:6835929/76‑1 (MQ=255) aaaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATaa > 1:2817958/1‑76 (MQ=255) aaaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATaa > 1:663824/1‑76 (MQ=255) aaaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATaa > 1:7197730/1‑76 (MQ=255) aaCGGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 1:1550470/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 2:1677434/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag > 2:5706634/1‑76 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 1:7346567/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 2:4933598/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 2:7470101/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag < 1:6244951/76‑1 (MQ=255) aaCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAag > 1:5514869/1‑76 (MQ=255) aCAGCGCCTGATGCGACGTTTACCCCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAaga < 1:2843223/76‑1 (MQ=255) aCAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAaga < 2:4349228/76‑1 (MQ=255) cAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAagag < 2:802639/76‑1 (MQ=255) aGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGc < 2:6521145/76‑1 (MQ=255) gcgcCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGcc < 1:3595597/76‑1 (MQ=255) gcgcCGGATGGGACGTTTACACCCGTCCGTACCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGcc < 2:4846182/76‑1 (MQ=255) cgcCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCg > 2:2559251/1‑76 (MQ=255) cgcCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCg < 1:1107360/76‑1 (MQ=255) ccTGATGCGACGTTTACCCCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGa < 1:6478519/76‑1 (MQ=255) ccTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGa < 2:7322789/76‑1 (MQ=255) tGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGAcc > 2:1133614/1‑76 (MQ=255) tGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGAcc > 2:7151601/1‑76 (MQ=255) tGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGAcc > 2:2104062/1‑76 (MQ=255) tGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGAcc > 2:2794929/1‑76 (MQ=255) aTGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGc > 1:6355596/1‑76 (MQ=255) gCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCAc < 2:3173941/76‑1 (MQ=255) aCGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTc < 1:81289/76‑1 (MQ=255) aCGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTc < 2:5345533/76‑1 (MQ=255) aCGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTc < 2:1515149/76‑1 (MQ=255) cGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTCa < 2:6624467/76‑1 (MQ=255) gTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTCaa > 2:144143/1‑76 (MQ=255) | ATCAGGCCTACAAAACCGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACAGCGCCTGATGCGACGTTTACACCCGTCCGTAGCGATCCGCGAAGCGCACCACATCATCCTCTTCGAGATAAGAGCCGGACCGCACTTCAA > REL606/2056212‑2056362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |