| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 799331 | 396 (1.620) | 4 (0.020) | 3/140 | 17.4 | 1.2% | intergenic (‑56/+728) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor |
| ? | REL606 | = 799578 | 285 (1.250) | intergenic (‑303/+481) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 315 total aligned reads displayed.
TTGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGTTGGAT > REL606/799503‑799653 | ttGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtg > 1:696046/1‑76 (MQ=255)ttGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtg > 1:5471517/1‑76 (MQ=255) tGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtga > 1:1271790/1‑76 (MQ=255) tGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtga > 2:5865900/1‑76 (MQ=255) tGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtga < 2:103110/76‑1 (MQ=255) gCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtgatg < 2:238410/76‑1 (MQ=255) gCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATtgatg < 1:5789543/76‑1 (MQ=255) gATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTgatgat > 1:975777/1‑76 (MQ=255) gATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTgatgat < 2:4405058/76‑1 (MQ=255) gATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTgatgat < 1:2851571/76‑1 (MQ=255) gATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTgatgat < 1:2411028/76‑1 (MQ=255) aTAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATa < 2:4825661/76‑1 (MQ=255) aTAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATa > 2:5162232/1‑76 (MQ=255) aTAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATa < 2:5978352/76‑1 (MQ=255) aaTGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACg > 2:2018538/1‑76 (MQ=255) aaTGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACg > 2:5015498/1‑76 (MQ=255) aTGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGc > 1:3053379/1‑76 (MQ=255) aTGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGc < 2:298623/76‑1 (MQ=255) aTGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGc > 1:3807553/1‑76 (MQ=255) tttAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCa > 2:3917851/3‑76 (MQ=255) tGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCa > 1:3127761/1‑76 (MQ=255) tGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCa < 2:3686459/76‑1 (MQ=255) tGTAGACATCGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCa < 2:2287630/76‑1 (MQ=255) gTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCaa < 2:1793420/76‑1 (MQ=255) tAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCaaa < 2:1257587/76‑1 (MQ=255) aGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCaaaa < 2:7703529/76‑1 (MQ=255) gACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAAt > 2:6349297/1‑76 (MQ=255) gACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAAt < 1:3551674/76‑1 (MQ=255) aCATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATa < 1:1477260/76‑1 (MQ=255) aCATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTATGTATTCTGAATTGATGATACGCAAAATa < 2:4613355/76‑1 (MQ=255) tGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATaaaa < 1:896354/76‑1 (MQ=255) tGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATaaaa > 1:633440/1‑76 (MQ=255) ggATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAAc > 1:3360767/1‑76 (MQ=255) gATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACt < 1:4807228/76‑1 (MQ=255) aTAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACtt > 1:4065673/1‑76 (MQ=255) aaGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACtttt > 2:727929/1‑76 (MQ=255) aaGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACtttt > 2:1899494/1‑76 (MQ=255) cAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCt > 1:6004559/1‑76 (MQ=255) cAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCt < 2:7638933/76‑1 (MQ=255) cAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCt < 1:1593139/76‑1 (MQ=255) aaaaGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTa > 1:6237642/1‑76 (MQ=255) aaaaGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTa < 1:7676663/76‑1 (MQ=255) aaGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAAt < 2:821953/76‑1 (MQ=255) aGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAAtt < 1:446020/76‑1 (MQ=255) aGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAAtt < 2:5246983/76‑1 (MQ=255) aGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAAtt > 2:3108887/1‑76 (MQ=255) aTACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATtct > 2:891601/1‑76 (MQ=255) aCCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCa < 1:6682560/76‑1 (MQ=255) ccAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCaa > 2:5675125/1‑76 (MQ=255) cAATGCAAAACATTAGCAGGTGACTTTGTAGTCTTAATTGATGATACGCAAAATAAAACTTTTTCTAATTCTCAat < 2:4196778/76‑1 (MQ=255) aaTGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAata > 2:6989508/1‑76 (MQ=255) cAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCtt < 1:6486146/76‑1 (MQ=255) aGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTa > 2:1726969/1‑76 (MQ=255) aGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTa > 1:2375970/1‑76 (MQ=255) gAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTAt < 2:2484220/76‑1 (MQ=255) aaCATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTAtt < 1:4544973/76‑1 (MQ=255) aaCATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTAtt < 2:2678878/76‑1 (MQ=255) aaCATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTAtt < 2:215865/76‑1 (MQ=255) aCATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTc < 1:4944986/76‑1 (MQ=255) aTTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTcac > 1:5702196/1‑76 (MQ=255) ttAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTcaca > 2:4054553/1‑76 (MQ=255) ttAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTcaca < 1:1013055/76‑1 (MQ=255) ttAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTcaca < 1:2648187/76‑1 (MQ=255) tAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACaa > 1:5381635/1‑76 (MQ=255) aGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACaaa < 2:3661787/76‑1 (MQ=255) cATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAAt < 1:5183266/76‑1 (MQ=255) aTGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAAtt < 1:4633731/76‑1 (MQ=255) aTGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAAtt > 1:1342260/1‑76 (MQ=255) tgACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATtgtg > 2:1322987/1‑76 (MQ=255) tgACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATtgtg > 1:22064/1‑76 (MQ=255) gACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGc > 1:3873715/1‑76 (MQ=255) cTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCat < 1:216799/76‑1 (MQ=255) cTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCat > 1:2586180/1‑76 (MQ=255) cTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCat < 2:2815764/76‑1 (MQ=255) cTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCat < 1:3964720/76‑1 (MQ=255) cTTTGTATTCTGAATTGATGATACGAAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCat < 1:5525107/76‑1 (MQ=255) ttGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCatat > 2:6568738/1‑76 (MQ=255) ttGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCatat > 1:3282539/1‑76 (MQ=255) ttGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCatat < 2:4169926/76‑1 (MQ=255) tATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATAtctc < 2:3598178/76‑1 (MQ=255) tATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATAtctc > 1:5911215/1‑76 (MQ=255) aTTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATctct > 1:6439001/1‑76 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 1:1726969/76‑1 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 1:5059492/76‑1 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 2:7439524/76‑1 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt > 2:3231168/1‑76 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 2:3074356/76‑1 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 2:2871101/76‑1 (MQ=255) ttCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCtt < 2:6470611/76‑1 (MQ=255) tCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTa < 2:1420114/76‑1 (MQ=255) cTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAg < 2:6102593/76‑1 (MQ=255) cTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAg > 1:7275948/1‑76 (MQ=255) cTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAg < 1:7397373/76‑1 (MQ=255) tGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAgg > 2:5586909/1‑76 (MQ=255) gAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGt < 1:1867327/76‑1 (MQ=255) gAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGt > 1:7724084/1‑76 (MQ=255) aaTTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGtt > 2:6330087/1‑76 (MQ=255) aaTTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGtt < 1:5333739/76‑1 (MQ=255) aTTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGTTg > 1:7050332/1‑76 (MQ=255) gatgatACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGTTGGat < 2:3298905/76‑1 (MQ=255) | TTGGCGATAATGTAGACATGGATAAGCAAAAGATACCAATGCAGAACATTAGCATGTGACTTTGTATTCTGAATTGATGATACGCAAAATAAAACTTTTGCTAATTCTCAATATCTTATTCACAAAATTGTGCATATCTCTTAGGTTGGAT > REL606/799503‑799653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |