| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 880528 = | 260 (1.100) | 3 (0.020) | 3/122 | 21.0 | 1.5% | intergenic (+17/+163) | ybjK/ECB_00814 | predicted DNA‑binding transcriptional regulator/conserved hypothetical protein |
| ? | REL606 | = 904682 | 179 (0.930) | intergenic (+77/+159) | ECB_00851/ybjL | protein similar to prophage P2 OGR protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 229 total aligned reads displayed.
GCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGAAAAG > REL606/904607‑904757 | gCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGc > 1:5029014/1‑76 (MQ=255)gCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGc < 1:2028170/76‑1 (MQ=255)gCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGc < 1:2002091/76‑1 (MQ=255) cTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGca > 2:2669257/1‑76 (MQ=255) gccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaac < 2:3740995/76‑1 (MQ=255) gccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaac < 2:4886485/76‑1 (MQ=255) ccgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaaca < 1:3300655/76‑1 (MQ=255) cgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGTATAAATTTCAGGcaacaa > 2:3313090/1‑76 (MQ=255) cgccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGcaacaa > 2:1017843/1‑76 (MQ=255) gccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaa > 1:6510258/1‑76 (MQ=255) gccATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaa > 1:4249636/1‑76 (MQ=255) cATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaa < 1:5901864/76‑1 (MQ=255) cATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaa < 1:6769533/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 2:4623886/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 2:5856445/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 2:1518281/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 1:1271686/76‑1 (MQ=255) aTTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACaaaaaa < 1:2745130/76‑1 (MQ=255) ttttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAc > 2:5743700/1‑76 (MQ=255) ttGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAAccc < 2:5367060/76‑1 (MQ=255) tGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCa > 1:3945714/1‑76 (MQ=255) gTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCAt > 1:251986/1‑76 (MQ=255) gTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCAt > 1:423387/1‑76 (MQ=255) gTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCAt > 1:3392822/1‑76 (MQ=255) tCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATc > 2:4255119/1‑76 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:2317802/76‑1 (MQ=255) cGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCa < 1:5606487/76‑1 (MQ=255) aTCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCt < 2:5025210/76‑1 (MQ=255) tCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCtt > 1:1018081/1‑76 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg < 1:5522799/76‑1 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg > 1:7100619/1‑76 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg < 1:1086183/76‑1 (MQ=255) cGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTg < 2:4341548/76‑1 (MQ=255) gTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGa < 2:3832638/76‑1 (MQ=255) gTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGa > 2:1932508/1‑76 (MQ=255) gTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGa < 1:3621816/76‑1 (MQ=255) ttAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGaa < 1:6191931/76‑1 (MQ=255) tAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAAc > 2:7556703/1‑76 (MQ=255) aaaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGaa < 1:5092520/76‑1 (MQ=255) aaCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGaaa < 1:4058303/76‑1 (MQ=255) aCAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAAt < 2:7227743/76‑1 (MQ=255) cAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATg < 1:7421953/76‑1 (MQ=255) cAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATg > 2:3389971/1‑76 (MQ=255) gTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGc > 1:7197769/1‑76 (MQ=255) gTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGc < 2:6468084/76‑1 (MQ=255) tGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCg < 2:7588294/76‑1 (MQ=255) gCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCgg < 1:3263742/76‑1 (MQ=255) cTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggg > 1:2897942/1‑76 (MQ=255) cTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggg > 2:4781935/1‑76 (MQ=255) cTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggg < 2:4789681/76‑1 (MQ=255) ttCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCgggg > 2:2869736/1‑76 (MQ=255) tCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCggggg > 2:5667692/1‑75 (MQ=255) cTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCgggggg > 1:4157158/1‑74 (MQ=255) tAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTg < 2:3355461/76‑1 (MQ=255) tAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTg < 2:177601/76‑1 (MQ=255) aaCATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGa < 1:4845828/76‑1 (MQ=255) atcatGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATgg < 1:5960500/76‑1 (MQ=255) atcatGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATgg > 2:1631131/1‑76 (MQ=255) tcatGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATggg < 1:6534123/76‑1 (MQ=255) tcatGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTggg > 1:4521764/1‑76 (MQ=255) catGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGc < 2:1559761/76‑1 (MQ=255) catGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATgggg > 1:6654580/1‑75 (MQ=255) atGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCt > 2:1240304/1‑76 (MQ=255) tGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTc < 1:1799299/76‑1 (MQ=255) tGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGGTGGGCTc > 1:1134122/1‑76 (MQ=255) gATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTcc < 1:1432993/76‑1 (MQ=255) gATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTcc < 2:6360830/76‑1 (MQ=255) gATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGAGGGGGTcc > 1:7048152/1‑76 (MQ=255) aTTTTAAAGAGCATAAATTTTAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGTTGGGCGccc > 2:1815184/1‑75 (MQ=255) aTTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCca < 2:392480/76‑1 (MQ=255) aTTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGGTccc > 2:6073243/1‑75 (MQ=255) ttttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGAAGGGCTcccc > 2:7472440/1‑74 (MQ=255) tttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGGTGGGCGccccc > 2:6008699/1‑73 (MQ=255) tttAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCcaca < 1:4598749/76‑1 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaaa < 2:2332200/76‑1 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGGCCCCCaaa > 1:1706032/1‑76 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACaaa > 1:4540975/1‑76 (MQ=255) tAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGATGTGTGGGTCcacaca > 2:2218953/1‑74 (MQ=255) aaaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaaaa < 2:5463057/76‑1 (MQ=255) aaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAAt < 1:4789632/76‑1 (MQ=255) aaGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAAt < 1:7519949/76‑1 (MQ=255) agagCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACCAAAta > 2:1371082/1‑75 (MQ=255) gagCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATgg < 2:5149506/76‑1 (MQ=255) gCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATgggg < 1:2219504/76‑1 (MQ=255) cATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGa < 1:734457/76‑1 (MQ=255) tAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACa < 1:3711932/76‑1 (MQ=255) aaTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATc < 1:4748267/76‑1 (MQ=255) aaTTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCCCAAAAAAGGGACATc > 2:3553920/1‑76 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCaaa < 1:1383112/76‑1 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCaaa < 1:1643030/76‑1 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCaaa < 1:2654560/76‑1 (MQ=255) ttCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGTCCCCAAAAAAGGGAGATCaaa > 1:1346936/1‑76 (MQ=255) tCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAg < 2:2121555/76‑1 (MQ=255) cAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGa < 2:7090493/76‑1 (MQ=255) cAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGa < 1:1663707/76‑1 (MQ=255) ggCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGaaa < 1:3175810/76‑1 (MQ=255) ggCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGaaa < 1:2803237/76‑1 (MQ=255) gCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGaaaa < 2:424913/76‑1 (MQ=255) caacaaAAATCCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGAAAAg < 2:6969122/76‑1 (MQ=255) caacaaAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGTGGGGTCCCCAAAAAGGGGGCATCAAAGaaaaa > 1:3050771/1‑75 (MQ=255) | GCTGCCGCCATTTTGTCGCCATCGTTAAAAAACAGTGCTTCTAACATCATGATTTTAAAGAGCATAAATTTCAGGCAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACATCAAAGAAAAG > REL606/904607‑904757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |