| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 330 (1.300) | 116/148 | 0.1 | NA | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3904522 = | NA (NA) | noncoding (908/1542 nt) | rrsC | 16S ribosomal RNA | |||||
Only 100 of 418 total aligned reads displayed.
TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893629‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT > REL606/3904522‑3904596 TTTTCAAAAGGGTATTTTGGCTTTGACATGTTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 2:4577233/76‑1TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:7641928/1‑76TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:3311919/76‑1TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 2:5247141/76‑1TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 2:4370957/76‑1TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:6165883/76‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAc < 2:77540/76‑2 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAc < 1:6012747/76‑2 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAc > 1:4166696/1‑75 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAA > 2:7666936/1‑76 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAA < 2:1404822/76‑1 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAA > 1:7486811/1‑76 TTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAA > 2:5031574/1‑76 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAA < 1:5358613/76‑1 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAA < 2:616877/76‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAccg < 1:75810/76‑4 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAccg < 2:3442602/76‑4 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAccg < 2:6786697/76‑4 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAccg < 1:2022940/76‑4 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAC > 1:1387551/1‑76 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAAC < 1:4518251/76‑1 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTC > 2:3108882/1‑76 AAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCA < 1:918096/76‑1 AAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCA < 1:8083377/76‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAA < 2:7546979/76‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAA < 1:8005835/76‑1 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGA < 2:1239185/76‑1 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGA > 1:5191732/1‑76 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGA > 2:4048318/1‑76 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAAT < 1:1906189/76‑1 ATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAAT > 2:7012167/1‑76 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATT < 1:1570505/76‑1 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTG < 2:163825/76‑1 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTG < 1:7862135/76‑1 TTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTG > 2:5418071/1‑76 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGAC > 1:4665956/1‑76 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGAC > 1:7820482/1‑76 TGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGAC > 1:3136089/1‑76 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACG > 1:2723740/1‑76 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGG > 2:7962880/1‑76 CTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGG < 2:2822745/76‑1 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAAATGACGGGGGCCC > 1:1480234/1‑76 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGC > 1:5413140/1‑76 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGC > 1:2220815/1‑76 ATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGC > 1:2487156/1‑76 ATTAGGGTCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCAC < 1:53219/76‑1 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCAC > 2:2123736/1‑76 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCAC > 1:7356963/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGGCCGCACA > 1:3246962/1‑76 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAA > 2:8269924/1‑76 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAA > 1:1828328/1‑76 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAG < 1:5049798/76‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGC < 2:5765992/76‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGC < 1:562929/76‑1 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGC > 1:3795988/1‑76 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGT < 2:488516/76‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTG > 1:1742509/1‑76 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGG > 1:1025780/1‑76 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGG > 2:5583530/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGg > 2:2403161/1‑75 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGA < 1:4006527/76‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGA > 1:4315515/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGGGGA > 2:2582045/1‑76 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAG < 2:4078958/76‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGGGC > 1:4770127/1‑76 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGC < 1:2894299/76‑1 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA > 1:2112398/1‑76 CCAGTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCA < 1:6700058/76‑1 CATTTCATCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT > 1:2943884/1‑76 TCGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTT < 2:2957256/76‑1 CGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTA < 2:2001282/76‑1 CGTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTA < 2:3779925/76‑1 GTCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAA > 1:6868853/1‑76 TCCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAAT < 1:3872813/76‑1 CCAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGGGCATGTGGTTTAATT > 1:6539007/1‑76 CAACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTC < 2:1851824/76‑1 AACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCG > 2:65730/1‑76 ACAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA > 1:27704/1‑76 CAAAATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAT > 1:3447825/1‑76 AATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCA > 1:8150933/1‑76 ATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAA > 2:4221950/1‑76 ATGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAA > 2:3975142/1‑76 TGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAC < 2:2892581/76‑1 TGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAC < 2:6232236/76‑1 TGGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAC < 1:3693607/76‑1 GGGTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACG < 2:6028327/76‑1 GTGCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCG > 2:7257902/1‑76 GCAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAA < 2:3550529/76‑1 CAGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAG > 2:3855893/1‑76 AGTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGA < 1:1203609/76‑1 GTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA < 1:4926704/76‑1 GTACAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA > 1:1940867/1‑76 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT < 2:5953163/76‑1 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT > 1:7439849/1‑76 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT < 2:6826342/76‑1 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT > 2:3268731/1‑76 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT < 1:4448894/76‑1 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT < 2:8082172/76‑1 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT < 1:7001042/76‑1 AAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT > 1:3552537/1‑76 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893629‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTT > REL606/3904522‑3904596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |