| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 242742 | 103 (0.440) | 6 (0.030) | 5/136 | 19.4 | 4.1% | intergenic (+360/‑71) | ECB_00212/yhhI | hypothetical protein/predicted transposase |
| ? | REL606 | = 1506442 | 188 (0.890) | coding (65/792 nt) | ydcC | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/242661‑242742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atattccACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTCC < REL606/1506442‑1506368 CGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGA < 2:4846462/76‑1 GCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGAT > 2:1496865/1‑76 GCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGAT < 1:461769/76‑1 CAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATA > 2:4645797/1‑76 CAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATA > 1:7236979/1‑76 CAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATA > 1:4145256/1‑76 CAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATA > 1:1922809/1‑76 AGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT > 1:288799/1‑76 AGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT < 1:3518687/76‑1 AGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT > 1:4246269/1‑76 AGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT > 2:5834875/1‑76 AGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT > 2:693283/1‑76 AGGGGCAGGGAAAGATCACGCAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATAT > 2:1621002/1‑76 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 1:1324921/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 2:453673/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 2:5331796/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 2:1526598/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 1:5824336/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 1:5344218/76‑1 GGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATT < 1:4382742/76‑1 GGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCC < 2:2697519/76‑1 TAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAA > 2:791239/1‑76 CATTTTATGTTTAAAAATTGAGATATTCCACTTTCCAGGCTCGTCTGTAATCGGGGATAATAGAAATATGTTCCAT > 2:3567531/1‑76 TTGAGATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCA > 2:7062217/1‑76 TTGAGATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCAGTTTTTTATGTTCCA > 2:6928783/1‑76 TGAGATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCAT > 2:1458460/1‑76 GAGATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATT > 2:58451/1‑76 ATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTG > 2:5053014/1‑76 ATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTG < 1:2323636/76‑1 ATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTG > 1:3576781/1‑76 ATATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTG > 1:3867230/1‑76 TATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGT > 1:1508815/1‑76 TATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGT > 1:1037826/1‑76 TATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGT > 2:2993407/1‑76 TATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGT > 1:5662783/1‑76 ATTCCACTTTCCAGGCTTGTCTGTAATCGGGGGTAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTT > 1:4859932/1‑76 ATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTT > 1:925862/1‑76 ATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTT < 1:1841854/76‑1 ATTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTT > 1:7016227/1‑76 TTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTC > 2:716613/1‑76 TTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTC < 2:869831/76‑1 TTCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTC > 2:490267/1‑76 TCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCT < 2:2908433/76‑1 TCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCT > 1:6940657/1‑76 TCCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCT > 1:6123930/1‑76 CCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTTTTCTC > 2:824783/1‑76 CCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTC > 2:5706242/1‑76 CCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTC < 2:5923705/76‑1 CCACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTC > 2:3301131/1‑76 CACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTCC < 2:411818/76‑1 CGCAGGGGCAGGGAAAGATCACGTAACGCTGATTTTTTGTACTAAATAATTCGCATTTTATGTTTAAAAATTGAGATATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/242661‑242742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atattccACTTTCCAGGCTTGTCTGTAATCGGGGATAATAGAAATATGTTCCATCATTTTTTTAAGTTCCATTTTGTTCTCC < REL606/1506442‑1506368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |