| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2406673 | 266 (1.150) | 5 (0.020) | 4/138 | 20.4 | 1.9% | intergenic (+363/‑3) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/putative DNA modification enzyme; b2345_1 |
| ? | REL606 | = 2407104 | 280 (1.310) | pseudogene (44/462 nt) | yfdF | putative DNA modification enzyme; b2345_1 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 304 total aligned reads displayed.
TTGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACC > REL606/2407029‑2407179 | ttGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTgg > 2:4113776/1‑76 (MQ=255)ttGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTgg > 1:6533553/1‑76 (MQ=255) gagaAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGtt > 1:244500/1‑76 (MQ=255) gaagaCTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGtttt < 1:3681948/76‑1 (MQ=255) gaagaCTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGtttt < 2:4199362/76‑1 (MQ=255) gaCTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTAta < 2:2450834/76‑2 (MQ=255) cTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCtt > 2:5762053/1‑76 (MQ=255) cTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCtt < 1:6887921/76‑1 (MQ=255) tCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTc > 2:4756428/1‑76 (MQ=255) tCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTc > 1:4510364/1‑76 (MQ=255) cATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCg > 2:1350484/1‑76 (MQ=255) cATGAAATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCg > 2:6877453/1‑76 (MQ=255) gATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATa > 1:755559/1‑76 (MQ=255) gATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATa > 2:6650794/1‑76 (MQ=255) atatCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATaa > 1:4782795/1‑76 (MQ=255) atatCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATaa < 1:3835629/76‑1 (MQ=255) tatCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAg < 1:1862069/76‑1 (MQ=255) tatCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAg < 2:6102793/76‑1 (MQ=255) tatCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAg > 2:4332252/1‑76 (MQ=255) tCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGat < 1:3305966/76‑1 (MQ=255) tCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGat < 1:3050314/76‑1 (MQ=255) aaTAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGatat < 1:4424340/76‑1 (MQ=255) aTAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATc < 1:5850455/76‑1 (MQ=255) tAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATca > 1:715522/1‑76 (MQ=255) aaCAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcac < 1:4033007/76‑1 (MQ=255) aaCAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcac > 2:5546956/1‑76 (MQ=255) aCAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcaca < 2:3573380/76‑1 (MQ=255) aCAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcaca < 2:4535451/76‑1 (MQ=255) cAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacac > 1:2314321/1‑76 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca > 1:3581814/1‑76 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca < 2:3303733/76‑1 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca < 1:4014510/76‑1 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca > 1:4323379/1‑76 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca > 2:1266932/1‑76 (MQ=255) aaGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATcacaca > 2:6785811/1‑76 (MQ=255) aGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACaa < 2:909572/76‑1 (MQ=255) aaaTGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACt > 2:5466923/1‑76 (MQ=255) aTGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCa < 1:1083403/76‑1 (MQ=255) aTGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCa > 1:1404199/1‑76 (MQ=255) tGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAg < 2:3703153/76‑1 (MQ=255) tGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAg > 1:535688/1‑76 (MQ=255) tGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAg < 1:3762736/76‑1 (MQ=255) gATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGa < 1:4849100/76‑1 (MQ=255) atcatcAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGAc > 1:3224397/1‑76 (MQ=255) aTCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGAc > 2:3377614/1‑76 (MQ=255) aTCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGAc > 2:2731478/1‑76 (MQ=255) aTCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGAc < 1:4223669/76‑1 (MQ=255) tCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACa > 2:2963025/1‑76 (MQ=255) cTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACAt > 2:1588244/1‑76 (MQ=255) cTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACAt < 2:4979710/76‑1 (MQ=255) cTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACAt < 1:6178106/76‑1 (MQ=255) ttCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATa < 2:7048784/76‑1 (MQ=255) ttCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATa > 1:2668985/1‑76 (MQ=255) tCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATAc < 2:1780654/76‑1 (MQ=255) tCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATAc < 1:6962493/76‑1 (MQ=255) cAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACg < 1:2845130/76‑1 (MQ=255) cAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACg < 1:3059327/76‑1 (MQ=255) aGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACgg < 2:5479953/76‑1 (MQ=255) aGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACgg < 2:6419217/76‑1 (MQ=255) aGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACgg > 1:7022427/1‑76 (MQ=255) aGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACgg > 2:4656647/1‑76 (MQ=255) gcgcATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGt < 1:526732/76‑1 (MQ=255) gcATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTaa < 2:2505627/76‑1 (MQ=255) gcATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTaa < 1:2523138/76‑1 (MQ=255) ttAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACgg < 1:2938388/76‑1 (MQ=255) aaaaGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGaa > 2:2868146/1‑76 (MQ=255) aaaaGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGaa > 2:82311/1‑76 (MQ=255) aaGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAAtt > 2:2107980/1‑76 (MQ=255) aGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAAttt < 1:1889214/76‑1 (MQ=255) gAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtg > 1:506340/1‑76 (MQ=255) gAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtg < 2:6733876/76‑1 (MQ=255) aaTATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgat > 2:3080063/1‑76 (MQ=255) aaTATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgat < 2:2211771/76‑1 (MQ=255) atatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgatg > 2:5639458/1‑76 (MQ=255) atatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgatg < 1:1675367/76‑1 (MQ=255) atatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgatg > 2:5870852/1‑76 (MQ=255) tatatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTtgatga > 1:6654664/1‑76 (MQ=255) atatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATgag < 1:198138/76‑1 (MQ=255) atatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATgag > 1:5605818/1‑76 (MQ=255) atatGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATgag > 2:7420336/1‑76 (MQ=255) atgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGagag > 1:6365260/1‑76 (MQ=255) atgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGagag < 1:7381910/76‑1 (MQ=255) atgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGagag > 2:1110432/1‑76 (MQ=255) tgatgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGc > 2:4430750/1‑76 (MQ=255) atgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCgg > 1:6005442/1‑76 (MQ=255) atgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCgg > 2:6201133/1‑76 (MQ=255) atgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCgg > 2:6077848/1‑76 (MQ=255) atgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCgg < 2:5276716/76‑1 (MQ=255) atgGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCgg > 1:5693213/1‑76 (MQ=255) aggtCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaa < 1:1804923/73‑1 (MQ=255) agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaa > 2:7129557/1‑76 (MQ=255) agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaa > 2:7303366/1‑76 (MQ=255) agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaa < 1:1033114/76‑1 (MQ=255) agaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaa < 1:2127679/76‑1 (MQ=255) gaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaaa < 2:3976407/76‑1 (MQ=255) gaTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGaaaa > 2:3845883/1‑76 (MQ=255) aTCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAg > 2:1402651/1‑76 (MQ=255) ccTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCg > 2:6221207/1‑76 (MQ=255) ggTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAAc > 2:774741/1‑76 (MQ=255) gTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAAcc < 1:851700/76‑1 (MQ=255) | TTGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACC > REL606/2407029‑2407179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |