| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1143523 = | 181 (0.920) | 4 (0.020) | 4/136 | 15.9 | 2.3% | coding (1113/1536 nt) | mviN | predicted inner membrane protein |
| ? | REL606 | 1143547 = | 179 (1.010) | coding (1137/1536 nt) | mviN | predicted inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1143604‑1143523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggaCATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > REL606/1143547‑1143621 GTTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAG < 1:4292261/76‑1 TTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGC < 2:887036/76‑1 TTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGC > 2:3064132/1‑76 TTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGC > 1:4832362/1‑76 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:2139313/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:2915351/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:3647359/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:1365804/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:3809014/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC > 2:4053834/1‑76 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 1:5159403/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 2:461500/76‑1 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC > 1:457577/1‑76 TCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCC < 1:1694428/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG < 1:3962259/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG < 1:2859058/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG > 1:1736122/1‑76 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG < 1:2764618/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG < 1:268539/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG < 1:1884004/76‑1 ATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAG > 1:6055882/1‑76 TCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGG < 2:4835035/76‑1 TCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGG < 1:1562193/76‑1 TCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGG > 1:5007549/1‑76 TCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGG < 2:5978232/76‑1 TCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGG < 2:537949/76‑1 CAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGA > 1:5788700/1‑76 CAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGA > 1:1463585/1‑76 TGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGACATTAAAACGCCAGTGAAAATTGCCA > 2:6335148/1‑76 GCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGACATTAAAACGCCAGTGAAAATTGCCATC < 1:6335148/76‑1 CACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGACATTAAAACGCCAGTG > 2:1557250/1‑56 CACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGACATTAAAACGCCAGTG < 1:1557250/56‑1 GCCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTAT < 1:2334894/76‑1 GCCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTAT < 1:3129420/76‑1 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT < 1:5372218/76‑1 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT > 2:5453759/1‑76 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT > 1:3960304/1‑76 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT > 1:6124747/1‑76 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT < 2:3015600/76‑1 CCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATT > 2:2011158/1‑76 CAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTG > 2:1645684/1‑76 CAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTG > 2:1891408/1‑76 CAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTG < 2:3986585/76‑1 CAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTG > 2:4899214/1‑76 CAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTG > 2:2757859/1‑76 AGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAGCCTGGCGTTTATTGG > 1:4781712/1‑76 AGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGG < 2:459502/76‑1 GGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGT < 1:4431986/76‑1 ACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > 2:3917140/1‑76 ACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > 2:210949/1‑76 ACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > 2:5071466/1‑76 ACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > 2:2163289/1‑76 ACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > 2:2038631/1‑76 GTTCATCAATTGCGTTAAAATCAGCGTAACGATGGCAATTTTCACTGGCGTTTTAATGTCCTGGCGGGAATAAAAGCCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/1143604‑1143523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggaCATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCC > REL606/1143547‑1143621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |