| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021237 = | 175 (0.890) | 5 (0.030) | 3/142 | 17.0 | 2.2% | coding (247/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | 3021461 = | 278 (1.500) | coding (23/933 nt) | ECB_02820 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 178 total aligned reads displayed.
AATACCCATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGT > REL606/3021162‑3021312 | tACCCATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTaa > 2:2069147/1‑76 (MQ=255) tACCCATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTaa > 1:2301050/1‑76 (MQ=255) cccATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAAtt > 1:4845777/1‑76 (MQ=255) cccATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAAtt > 2:1268078/1‑76 (MQ=255) ttGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTttat > 2:4223845/1‑76 (MQ=255) cTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAg > 1:2102609/1‑76 (MQ=255) cTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAg > 1:5783272/1‑76 (MQ=255) cTATAATAAAAATTAAAA‑CC‑TGGATGACCAAAAAAATCCGTAGGATTCAAAAAAAAAAAAGCCGTAATTTTATTAg < 1:6028266/76‑1 (MQ=255) tattatCAAAAATTAAA‑AC‑CTTATGACCGATAAAATCCGCAGGATTCTGGAAAAAAAAAGCCGTAAATttattata > 2:5696267/1‑74 (MQ=255) tataATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGa > 2:6345095/1‑76 (MQ=255) ataATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGAt > 2:2093748/1‑76 (MQ=255) ataATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGAt > 1:3857504/1‑76 (MQ=255) taATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGAtt > 2:1899560/1‑76 (MQ=255) aaTCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTc > 1:5299219/1‑76 (MQ=255) aaTCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTc > 1:3905152/1‑76 (MQ=255) aaaaaaaATTAAA‑CCTTTGATGACAAAAAAAATCGGTAGGATTCAAAAAAAAAAAAGCCGTAATTTTATTAGATTc < 2:4134439/73‑1 (MQ=255) tCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGt > 1:5655293/1‑76 (MQ=255) aaaaaaTTAAAA‑CC‑TTGATGACAAAAAAAATCCGTAGGATTAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGt < 2:4291385/74‑1 (MQ=255) cAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTc > 2:2935664/1‑76 (MQ=255) cAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTc > 2:1200045/1‑76 (MQ=255) aaaaTTTAAA‑CC‑TTGATGACCGAAAAAATCCGTAGTATTCAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTca < 2:5980620/76‑1 (MQ=255) aaaaATTAAACCC‑TTGATGACAAAAAAAATCGGTAGGATTAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTc < 2:3718386/76‑1 (MQ=255) aaaGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTcaa > 2:4749955/1‑76 (MQ=255) aaaGTAAAA‑CT‑TTGATGACAAAAAAAATCCGTAGAATAAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTcaa < 1:4223067/76‑1 (MQ=255) aaGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTcaac > 2:419295/1‑76 (MQ=255) aGTTAAA‑CT‑TTGATGACAGAAAAAATCGGTAGGATAAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTcaaca < 2:2613791/76‑1 (MQ=255) aGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTcaaca > 1:2690524/1‑76 (MQ=255) ttaaaa‑CC‑TGAATGACAGAAAAAATCCGTAGGATTAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTcaacaa < 2:3450496/73‑1 (MQ=255) ttAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAg > 2:5562663/1‑76 (MQ=255) tAAA‑CCTTTGATAACAAAAAAAATCCGTAGGATAAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAg < 2:1423763/76‑1 (MQ=255) tAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGc > 2:5177643/1‑76 (MQ=255) tAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGc > 2:5238803/1‑76 (MQ=255) tAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGc > 2:5848170/1‑76 (MQ=255) aa‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaa > 1:5969651/1‑76 (MQ=255) a‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaa > 2:1110019/1‑76 (MQ=255) cc‑TTGAGGACAAAAAAAAGCCGTAGAATTAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaa < 2:2853662/76‑1 (MQ=255) ctttGATGACAAAAAAAACCCGTAGGATTAAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaa < 2:1071627/74‑1 (MQ=255) c‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaa > 1:6091613/1‑76 (MQ=255) c‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaa > 1:1171050/1‑76 (MQ=255) c‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaa > 1:4977116/1‑76 (MQ=255) c‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaa > 1:2341023/1‑76 (MQ=255) ttGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCaaaaaa > 2:625433/1‑76 (MQ=255) tgatgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaat > 2:4024913/1‑76 (MQ=255) tgatgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaat > 2:1731791/1‑76 (MQ=255) tgatgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaat > 1:280369/1‑76 (MQ=255) atgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaataa > 1:719534/1‑76 (MQ=255) tgaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAaataat > 2:226538/1‑76 (MQ=255) gaCCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAAtt > 2:5781632/1‑76 (MQ=255) gATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACa > 2:5421155/1‑76 (MQ=255) aaaatTCCGTAGGATCAAGAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAAc < 2:2874244/75‑1 (MQ=255) aaaaTCGGTAGAATTCAAAAAAAAAAAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACt < 2:5390247/76‑1 (MQ=255) aaaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACt > 2:1634267/1‑76 (MQ=255) aaaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACt > 2:6015750/1‑76 (MQ=255) aaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTc > 2:4745716/1‑76 (MQ=255) aaaTCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTc > 1:1176527/1‑76 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt > 2:653604/1‑76 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt > 1:4464319/1‑76 (MQ=255) ccGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttt > 1:4619178/1‑76 (MQ=255) gTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCttttt > 1:4769414/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 1:5347804/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 2:956668/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 1:455906/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 2:3535659/1‑76 (MQ=255) tAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTc > 2:1763828/1‑76 (MQ=255) aGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCt > 1:5931224/1‑76 (MQ=255) ttCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGtt > 1:4390667/1‑76 (MQ=255) ttCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGtt > 1:2082137/1‑76 (MQ=255) tCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGttt > 2:5926013/1‑76 (MQ=255) cTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc > 2:3584615/1‑76 (MQ=255) cTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc > 1:1751904/1‑76 (MQ=255) cTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc > 2:398030/1‑76 (MQ=255) cTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc > 2:6090146/1‑76 (MQ=255) cTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc > 1:5601938/1‑76 (MQ=255) aaaaaaaaaaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTc < 2:2848654/73‑1 (MQ=255) aaaaaaaaaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTcc < 1:30407/74‑1 (MQ=255) gAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTccc > 1:6139327/1‑76 (MQ=255) gAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTccc > 1:6302785/1‑76 (MQ=255) aaaaaaaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt < 2:1567260/76‑1 (MQ=255) aaaaGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCt > 2:696369/1‑76 (MQ=255) aaaaaaaaAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTg < 2:2014734/76‑1 (MQ=255) aaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTAc < 2:3891623/73‑1 (MQ=255) aaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTAc < 1:3302294/73‑1 (MQ=255) aaaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTAc < 2:4728194/73‑1 (MQ=255) aaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACa < 1:1367366/74‑1 (MQ=255) aaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACa < 1:3604060/74‑1 (MQ=255) aaaaGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACa < 1:3513461/74‑1 (MQ=255) cAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACAt > 2:3120008/1‑76 (MQ=255) aGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGt < 2:5976029/76‑1 (MQ=255) gCCGTATTTTTATTAGATTCGTAAACAAGAAAAAAATAATTTACACCCCTTTTTTCTGGTTCCCCTTTTACATGTa < 2:4863227/76‑1 (MQ=255) gCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTa < 2:3509963/76‑1 (MQ=255) gCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTa < 2:4162919/76‑1 (MQ=255) gCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTa > 2:3034431/1‑76 (MQ=255) gCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTa < 2:3100404/76‑1 (MQ=255) ccGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAg > 1:2506336/1‑76 (MQ=255) ccGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAg < 2:3263059/76‑1 (MQ=255) ccGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAg > 2:3847487/1‑76 (MQ=255) gTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtg > 1:906062/1‑76 (MQ=255) tAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtgt < 1:5557636/76‑1 (MQ=255) tAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtgt < 2:5267473/76‑1 (MQ=255) tAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAgtgt < 2:752614/76‑1 (MQ=255) | AATACCCATTGCTATAATCAAAAGTTAAA‑CC‑TTGATGACCGATAAAATCCGTAGGATTCTGAAAAGAACAAGCCGTAATTTTATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGT > REL606/3021162‑3021312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |