| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2680076 = | 230 (1.170) | 8 (0.040) | 5/148 | 15.9 | 3.6% | coding (1148/1557 nt) | ECB_02510 | Recombinase |
| ? | REL606 | 2680568 = | 202 (1.040) | coding (94/897 nt) | ECB_02511 | ParB family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 210 total aligned reads displayed.
GAATTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATTGATGAAGGCGATT > REL606/2680493‑2680643 | gAATTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATg < 2:1474156/76‑1 (MQ=255)gAATTCCCAATAATACAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATg < 1:4774960/76‑1 (MQ=255) aaTTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATga < 2:5247643/76‑1 (MQ=255) aTTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaa < 2:5263020/76‑1 (MQ=255) aTTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaa > 1:2961174/1‑76 (MQ=255) ttCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaag < 2:673922/76‑1 (MQ=255) ttCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaag < 1:6313399/76‑1 (MQ=255) ttCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaag < 1:4549338/76‑1 (MQ=255) cccAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATgaagaa < 2:3954069/76‑1 (MQ=255) ccAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGaaa < 1:3084057/76‑1 (MQ=255) aataatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATa > 1:4136958/1‑76 (MQ=255) ataatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATaa < 1:5399968/76‑1 (MQ=255) ataatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATaa < 2:2928417/76‑1 (MQ=255) taatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATaaa > 1:5977830/1‑76 (MQ=255) taatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATaaa < 1:1446194/76‑1 (MQ=255) taatTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATaaa > 1:1233703/1‑76 (MQ=255) atTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAgg < 1:5108337/76‑1 (MQ=255) atTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAgg < 2:2136050/76‑1 (MQ=255) atTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAgg > 1:3462406/1‑76 (MQ=255) atTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAgg < 1:348343/76‑1 (MQ=255) ttCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGa > 2:3247830/1‑76 (MQ=255) ttCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGa < 2:244834/76‑1 (MQ=255) tCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGaa < 1:3329443/76‑1 (MQ=255) tCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGaa < 2:4074632/76‑1 (MQ=255) aaaTTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAg > 1:2194659/1‑76 (MQ=255) aaTTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGc < 2:5070957/76‑1 (MQ=255) aaTTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGc < 2:4189000/76‑1 (MQ=255) aaTTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGc > 1:4613949/1‑76 (MQ=255) aaTTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGc > 1:3589699/1‑76 (MQ=255) ttGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCAt < 2:5659873/76‑1 (MQ=255) tGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATa > 1:3164698/1‑76 (MQ=255) tGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATa > 2:2223570/1‑76 (MQ=255) tGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATa > 2:4808136/1‑76 (MQ=255) gagaTTGTAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa > 1:852961/1‑76 (MQ=255) gagaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa > 2:3610640/1‑76 (MQ=255) gagaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa > 1:1630023/1‑76 (MQ=255) gagaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa < 1:2900802/76‑1 (MQ=255) gagaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa > 1:4412100/1‑76 (MQ=255) gagaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaa < 2:3069361/76‑1 (MQ=255) gaTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaa > 1:4004013/1‑76 (MQ=255) aTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaa < 2:2888724/76‑1 (MQ=255) aTTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaa < 1:2534028/76‑1 (MQ=255) tgtcAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaa < 1:5771116/73‑1 (MQ=255) tGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaa < 1:2748691/76‑1 (MQ=255) tGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaa > 2:737692/1‑76 (MQ=255) gCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaataaaaa > 2:5907307/1‑76 (MQ=255) gCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaaa > 2:4280663/1‑76 (MQ=255) gCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaaa > 2:1683554/1‑76 (MQ=255) gCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaaa > 2:6333521/1‑76 (MQ=255) gCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATaaaaaaaa < 1:4155489/76‑1 (MQ=255) cAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAag < 1:1833453/76‑1 (MQ=255) cAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAag < 1:5544443/76‑1 (MQ=255) cAAAAATAAAAGTGCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAag < 1:2222468/76‑1 (MQ=255) aaaataaaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAagag < 1:2272206/76‑1 (MQ=255) aaaataaaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAagag < 2:210393/76‑1 (MQ=255) aataaaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGa < 1:2415200/76‑1 (MQ=255) aaaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTa < 2:5178738/76‑1 (MQ=255) aaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaa > 2:326569/1‑76 (MQ=255) aaatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaa < 1:629160/76‑1 (MQ=255) aatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaag < 1:3609268/76‑1 (MQ=255) aatTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaag < 1:2004360/76‑1 (MQ=255) ttCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaa > 2:1031075/1‑76 (MQ=255) ttCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaa > 2:6263885/1‑76 (MQ=255) tCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaag > 2:3725346/1‑76 (MQ=255) tCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaag < 2:2771429/76‑1 (MQ=255) cTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaagc > 1:1910317/1‑76 (MQ=255) cTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaagc > 1:6089746/1‑76 (MQ=255) cTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaagc < 2:1961197/76‑1 (MQ=255) cTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaagc > 1:3762571/1‑76 (MQ=255) cTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTaagcaagc > 1:1012798/1‑76 (MQ=255) ttAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGcc > 2:2389042/1‑76 (MQ=255) tAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCt > 2:3487703/1‑76 (MQ=255) aaCCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCta < 2:1580740/76‑1 (MQ=255) aaCCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCta > 2:1130169/1‑76 (MQ=255) cccACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCtata > 2:4605288/1‑76 (MQ=255) cccACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCtata > 1:5294568/1‑76 (MQ=255) cGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCg > 2:2536685/1‑76 (MQ=255) cGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCg > 2:12913/1‑76 (MQ=255) gAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGt > 2:5130055/1‑76 (MQ=255) cAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAag > 1:5362329/1‑76 (MQ=255) aaGAAATATGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAaga > 2:1392071/1‑76 (MQ=255) aaGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAaga > 2:111278/1‑76 (MQ=255) aaaTAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCt < 2:4510577/76‑1 (MQ=255) aaTAAAGTATGGCATGAAAAAATAAAGAAAAGCATAAAAAAAAGAGGATTAACAAAGCCTATAAGCGTAAGAGCTa < 2:6351614/76‑1 (MQ=255) aTAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTAt > 2:3116829/1‑76 (MQ=255) aaGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATtg > 1:617114/1‑76 (MQ=255) aaGGTAGTGCATGAAAAAATAAAGAAAAGAAAAAAAAAAAGAGGATAAAAAAAGCCTATAAGCGTAAGAGCTATtg < 2:3575415/76‑1 (MQ=255) aGGTAGTGCATGAAGAAATAAAGAAAAGAAAAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCTATtga < 2:4671329/76‑1 (MQ=255) ggTAGTGCAAAAAAAAAAAAAGAAAAGCAAAAAAAAAAGAGGAAAAAGAAAGCCTATAAGCGTAAGAGCTAttaaa < 2:183608/76‑4 (MQ=255) gTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATtgatg > 1:1080527/1‑76 (MQ=255) gTAGTGCAAAAAAAAAAAAAGAAAAACAAAAAAAAAAGAGAATAAAGAAAGCCTATAAGCGTAAGAGCTATtgatg < 2:5568844/76‑1 (MQ=255) gTAGTGAATAAAAAAAAAAGGAAAAGAAAAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCTATtgatg < 1:3293376/76‑1 (MQ=255) tAGTGCATGAAGAAAAAAAGAAAAGAAAAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCTATtgatga < 1:975013/76‑1 (MQ=255) tAGTGCATAAAAAAAAAAAGGAAAGAAAAAAAAAAAGAGAATAAAAAAAGCCTATAAGCGTAAGAGCTATtgatga < 2:1645779/76‑1 (MQ=255) tAGTGCATAAAAAAAAAAAGAAAAGCAAAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCTATtgatga < 2:3818798/76‑1 (MQ=255) tAGTGAATGAAAAAAAAAAGAAAAGAAAAAAAAAAAGAGAATAAAGAAAGCCTATAAGCGTAAGAGCTATtgatga < 1:793967/76‑1 (MQ=255) aGTGCATGAAAAAAAAAAGAAAAGAAAAAAAAAAAGAGAATAAAAAAAGCCTATAAGCGTAAGAGCTATTGATGaa < 2:1977889/76‑1 (MQ=255) tgaaTGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATAAAGAAAGCCTATAAGCGTAAGAGCTATTGATGAAgg < 2:4459650/73‑1 (MQ=255) tGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATTGATGAAGGCGAt > 2:5513636/1‑76 (MQ=255) gaagaaATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATTGATGAAGGCGAtt > 2:5641176/1‑76 (MQ=255) | GAATTCCCAATAATTCAAATTGAGATTGCAAAAATAAAATTTCTTAACCCACGAACAAGAAATAAGGTAGTGCATGAAGAAATAAAGGAAAGCATAAAAAAAAGAGGATTAAGCAAGCCTATAAGCGTAAGAGCTATTGATGAAGGCGATT > REL606/2680493‑2680643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |