| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 358687 = | 189 (0.880) | 3 (0.020) | 3/134 | 21.3 | 1.4% | intergenic (‑52/+138) | hemB/ECB_00320 | delta‑aminolevulinic acid dehydratase/hypothetical protein |
| ? | REL606 | 359169 = | 260 (1.350) | coding (12/2907 nt) | yaiT | conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/358769‑358687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactcctgGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAAA > REL606/359169‑359243 GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAAC < 1:1959656/76‑1GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAAC > 1:6774746/1‑76GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAAC < 2:1141333/76‑1GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAAC > 2:4039370/1‑76GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAAC < 2:4387749/76‑1 CTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCGTTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACA < 1:6381327/76‑1 CTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACA > 2:2307955/1‑76 CTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACA < 1:6816561/76‑1 CTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACA > 1:4236788/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 1:4328010/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 2:6058702/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 2:771038/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 2:2411201/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC < 1:2487129/76‑1 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 2:1167346/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 1:5202792/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 1:2198014/1‑76 TATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACAC > 1:2589900/1‑76 ATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACT > 2:5946070/1‑76 ATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACT > 1:6263509/1‑76 TTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTC > 2:493814/1‑76 TTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTC < 1:87537/76‑1 TTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTC > 2:1176395/1‑76 TTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCC > 2:98641/1‑76 TTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCC > 1:2199239/1‑76 TTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCC > 1:6406273/1‑76 TTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCC < 2:4194426/76‑1 TTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCC > 2:4477551/1‑76 TCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCT < 2:1033377/76‑1 CTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG > 1:6224284/1‑76 CTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG > 2:6784953/1‑76 CTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG < 2:5326112/76‑1 CTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG < 2:5251193/76‑1 CTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG > 1:4987425/1‑76 GATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTGGAAAAAGAAA < 2:4794353/76‑1 CTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTGGAAAAAGAAACTTGTA < 2:2514744/76‑1 TGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTGGAAAAAGAAACTTGTAG < 2:3778549/76‑1 CACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATTACCTCTCAGGCTAATG > 2:144385/1‑76 CACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATG < 2:4571549/76‑1 ACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGC > 2:4000691/1‑76 ACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGC < 2:3397326/76‑1 CTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCA > 2:2816918/1‑76 CTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCA < 1:1703095/76‑1 CTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCA < 2:2194267/76‑1 CTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCA > 2:4435426/1‑76 TCCTGGAAAAAGAAACTTGTAGTATCACGATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAG < 2:2186164/76‑1 TCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCcg > 1:4585298/1‑74 TCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAG < 2:2439244/76‑1 TCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAG < 2:6703750/76‑1 TCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAG < 1:4420583/76‑1 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGC < 1:4881003/76‑1 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGC > 2:6610856/1‑76 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGC > 2:5459322/1‑76 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGC < 2:6221197/76‑1 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGC < 1:2289110/76‑1 CCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCCGGCTATCACCTCTCAGGCTAATGCAGC > 1:436217/1‑76 CTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCA < 2:820953/76‑1 CTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCA < 1:5421210/76‑1 CTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCA > 1:4319552/1‑76 TGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAA < 1:3221711/76‑1 TGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAA > 1:5430952/1‑76 TGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAA < 1:5437106/76‑1 TGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAA < 2:2301577/76‑1 TGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAA < 1:6416453/76‑1 GGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAAA < 1:6659338/76‑1 GCTATTTCTATTACAACGATGTCCTGGTCTCTCTTTCATTCTCTTCTTGTCAACATCGCGACAACTTTCGTAAAACACTCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/358769‑358687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactcctgGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAAA > REL606/359169‑359243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |