| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 358687 = | 189 (0.880) | 3 (0.020) | 3/134 | 21.3 | 1.4% | intergenic (‑52/+138) | hemB/ECB_00320 | delta‑aminolevulinic acid dehydratase/hypothetical protein |
| ? | REL606 | 359169 = | 260 (1.350) | coding (12/2907 nt) | yaiT | conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 194 total aligned reads displayed.
AGGGCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAATAG > REL606/358612‑358762 | aGGGCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGc < 1:4542759/76‑1 (MQ=255) gggCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCTGGGCa < 2:135968/76‑1 (MQ=255) gggCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCa < 2:1966763/76‑1 (MQ=255) gCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAgg < 2:565014/76‑1 (MQ=255) gCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAgg < 1:2660822/76‑1 (MQ=255) gCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAgg < 1:2397996/76‑1 (MQ=255) cGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGa < 1:3717169/76‑1 (MQ=255) cGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGa > 2:1691526/1‑76 (MQ=255) cGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGa > 2:1124054/1‑76 (MQ=255) gTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAg > 2:225667/1‑76 (MQ=255) gTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAg > 1:6271252/1‑76 (MQ=255) tGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAgtg > 2:3604042/1‑76 (MQ=255) ggATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAgtgt > 1:2876052/1‑76 (MQ=255) ggATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAgtgt < 2:1211005/76‑1 (MQ=255) aTTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGttt > 1:1110954/1‑76 (MQ=255) ttAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGtttt < 2:1881882/76‑1 (MQ=255) ttAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGtttt < 2:303940/76‑1 (MQ=255) ttAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGtttt > 1:3089345/1‑76 (MQ=255) tAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTa < 2:862207/76‑1 (MQ=255) aaGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTAc < 1:5215411/76‑1 (MQ=255) tCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGtt < 1:2903758/76‑1 (MQ=255) cATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTg > 1:4913679/1‑76 (MQ=255) cATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTg > 1:2252791/1‑76 (MQ=255) aTGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGt > 2:4756952/1‑76 (MQ=255) aTGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGt > 1:3005135/1‑76 (MQ=255) tGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTc > 1:1785500/1‑76 (MQ=255) tGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGAt > 1:2691021/1‑76 (MQ=255) tGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGAt < 1:648573/76‑1 (MQ=255) ccTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGt < 1:3507697/76‑1 (MQ=255) ccTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGt < 1:5111319/76‑1 (MQ=255) ccTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGt > 1:1322000/1‑76 (MQ=255) cTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGtt < 2:3343568/76‑1 (MQ=255) tGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTg > 2:6319153/1‑76 (MQ=255) gATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGa > 1:2526440/1‑76 (MQ=255) gATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGa < 2:6715438/76‑1 (MQ=255) aTGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGAc < 1:2093018/76‑1 (MQ=255) aTGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGAc < 2:2403620/76‑1 (MQ=255) tGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACa < 1:2131254/76‑1 (MQ=255) gTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACaa > 1:6170361/1‑76 (MQ=255) ttGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACaaga < 2:2012058/76‑1 (MQ=255) ttGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACaaga < 1:28538/76‑1 (MQ=255) tgtgGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACaagaa < 1:880155/76‑1 (MQ=255) tgGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAagaaga < 2:47026/76‑1 (MQ=255) tgGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAagaaga > 1:3865206/1‑76 (MQ=255) ggAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAagag < 1:3366820/76‑1 (MQ=255) ggAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAagag < 2:6402749/76‑1 (MQ=255) gAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAgaga > 2:3195978/1‑76 (MQ=255) ttAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATg < 1:5647428/76‑1 (MQ=255) tAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGa < 2:1594846/76‑1 (MQ=255) aaGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATgta > 2:4460090/1‑74 (MQ=255) aaGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGaa > 1:477923/1‑76 (MQ=255) aaGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGaa < 1:6896941/76‑1 (MQ=255) aGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGaaa < 1:1196561/76‑1 (MQ=255) ggTGCACAGTATACCTGAAGCGGGGCATGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAag < 2:5953425/76‑1 (MQ=255) ggTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAag < 1:4446564/76‑1 (MQ=255) gTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAaga < 1:5160404/76‑1 (MQ=255) gTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAaga < 1:4598317/76‑1 (MQ=255) tGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAagag > 1:6229992/1‑76 (MQ=255) gCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAagaga < 2:3755775/76‑1 (MQ=255) cacaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAagagag < 2:6473377/76‑1 (MQ=255) cacaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAagagag < 1:531228/76‑1 (MQ=255) acaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAgagaga < 1:1973664/76‑1 (MQ=255) acaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAgagaga < 1:1659478/76‑1 (MQ=255) acaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAgagaga < 2:2876052/76‑1 (MQ=255) acaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAgagaga > 2:1569656/1‑76 (MQ=255) acaGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAgagaga < 1:6840764/76‑1 (MQ=255) caGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGAc < 2:2033602/76‑1 (MQ=255) tataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAg > 2:2489666/1‑76 (MQ=255) tataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAg > 1:1533834/1‑76 (MQ=255) tataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAg < 2:4807596/76‑1 (MQ=255) ataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAgg > 2:4599428/1‑76 (MQ=255) ataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAgg > 1:2828596/1‑76 (MQ=255) ataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAgg < 1:69598/76‑1 (MQ=255) ataCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAgg < 1:6364563/76‑1 (MQ=255) taCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGa > 1:1704453/1‑76 (MQ=255) aCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGAc > 2:6862488/1‑76 (MQ=255) aCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGAc < 1:271146/76‑1 (MQ=255) aCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGAc < 1:6061824/76‑1 (MQ=255) aCCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGCCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGAc < 1:1020341/76‑1 (MQ=255) ccTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACa < 2:3665546/76‑1 (MQ=255) cTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACAt > 2:1622837/1‑76 (MQ=255) tGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATc > 1:4749968/1‑76 (MQ=255) tGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATc < 2:3865206/76‑1 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg > 1:5819638/1‑76 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg < 1:4773057/76‑1 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg > 1:5559192/1‑76 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg < 1:6363902/76‑1 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg > 1:6668529/1‑76 (MQ=255) gAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCg < 2:3439863/76‑1 (MQ=255) gAAGAGGGTCAGGAGTGGTTTGCTAATGTGTTCAAGAGGTCTGCAAGAAGAGCATGAAAGAGAGACCAGGACAtag < 2:3126079/76‑3 (MQ=255) aaGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGt > 1:4338423/1‑76 (MQ=255) aGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGtt < 2:5127814/76‑1 (MQ=255) aGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGtt < 2:5904209/76‑1 (MQ=255) aGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGtt > 2:4018451/1‑76 (MQ=255) gCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTg < 1:495063/76‑1 (MQ=255) ggggCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTa > 1:6032795/1‑76 (MQ=255) ggCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAAt < 2:6682155/76‑1 (MQ=255) gCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAATa < 1:1406021/76‑1 (MQ=255) cAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAATAg > 2:5326112/1‑76 (MQ=255) cAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAATAg < 1:4987425/76‑1 (MQ=255) | AGGGCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATTAAGGTGCACAGTATACCTGAAGCGGGGCAGGAGTGTTTTACGAAAGTTGTCGCGATGTTGACAAGAAGAGAATGAAAGAGAGACCAGGACATCGTTGTAATAG > REL606/358612‑358762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |