| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3582468 = | 162 (0.750) | 3 (0.020) | 3/138 | 21.6 | 2.0% | coding (488/1224 nt) | yhiS | hypothetical protein |
| ? | REL606 | 3582955 = | 145 (0.730) | coding (975/1224 nt) | yhiS | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 166 total aligned reads displayed.
CTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTA > REL606/3582393‑3582543 | cTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCAt < 1:6489629/76‑1 (MQ=255) aaCCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtt < 1:978024/76‑1 (MQ=255) aCCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGttt < 2:4485894/76‑1 (MQ=255) aCCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGttt < 1:4662982/76‑1 (MQ=255) cccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtttt < 1:1245382/76‑1 (MQ=255) cccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtttt < 1:874461/76‑1 (MQ=255) cccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtttt < 2:5790643/76‑1 (MQ=255) cccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGtttt < 2:3288811/76‑1 (MQ=255) ccGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTc > 1:6264995/1‑76 (MQ=255) cGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCa < 1:615444/76‑1 (MQ=255) cGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCa < 2:5379677/76‑1 (MQ=255) cGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCa > 2:2536536/1‑76 (MQ=255) cAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt < 1:4871530/76‑1 (MQ=255) cAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGAt < 1:3973247/76‑1 (MQ=255) aaGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATa < 2:1696755/76‑1 (MQ=255) aaGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATa > 2:358572/1‑76 (MQ=255) aaGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATa > 1:2813344/1‑76 (MQ=255) aGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATAc > 1:5406607/1‑76 (MQ=255) ggCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACt < 1:2022449/76‑1 (MQ=255) cAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTaa > 2:3731338/1‑76 (MQ=255) aaTCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAt < 2:6446402/76‑1 (MQ=255) cATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAtttt > 2:5291886/1‑76 (MQ=255) tAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAt < 2:2541192/76‑1 (MQ=255) tAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAt < 1:123045/76‑1 (MQ=255) tAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAt > 1:5764166/1‑76 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt > 2:4995543/1‑76 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt > 1:5730450/1‑76 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt > 2:6040525/1‑76 (MQ=255) cTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGc > 1:3652389/1‑76 (MQ=255) aaaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTg < 1:1726496/76‑1 (MQ=255) aaaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGa < 1:824422/76‑1 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa < 1:5589112/76‑1 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa < 2:3982914/76‑1 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaac > 1:4574957/1‑76 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaac > 1:3591368/1‑76 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaac < 1:6168668/76‑1 (MQ=255) aTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAAACATGTTTTCAGATACTAATTTTATTGCTGaac < 1:4379771/76‑1 (MQ=255) ttAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaaca < 1:3853608/76‑1 (MQ=255) tAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaa < 2:2809660/76‑1 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaac > 1:4328734/1‑76 (MQ=255) gCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACg > 2:211835/1‑76 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAg < 1:1635135/76‑1 (MQ=255) tAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGc < 1:2121089/76‑1 (MQ=255) agaagaGGGAGTACCCATAACAGTCAGTGTCCAAACGATGTTTTCAGATACTAATTTTATGGCTGAACAACGAGcg > 2:3366840/1‑75 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 2:2004566/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 1:4231525/1‑76 (MQ=255) gaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTg > 1:3289136/1‑76 (MQ=255) agagGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGAc > 2:6219111/1‑76 (MQ=255) agGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACtt < 1:103284/76‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:5438975/76‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:182563/76‑1 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:1593813/76‑1 (MQ=255) gggAATACCAATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa < 2:5905269/76‑1 (MQ=255) aaTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCa > 1:5147139/1‑76 (MQ=255) aaTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCa < 1:2536536/76‑1 (MQ=255) atccccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa < 2:184240/73‑1 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa > 1:5937751/1‑76 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa < 2:2139775/76‑1 (MQ=255) aCCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACt < 1:5231641/76‑1 (MQ=255) cccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTa < 2:2250959/76‑1 (MQ=255) cccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTa < 2:224308/76‑1 (MQ=255) cccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTa > 1:6865779/1‑76 (MQ=255) cccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTa < 2:588860/76‑1 (MQ=255) ccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTaa < 1:920344/76‑1 (MQ=255) ccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTaa < 1:77632/76‑1 (MQ=255) ccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTaa < 2:6750392/76‑1 (MQ=255) cATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAat > 1:6023912/1‑76 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAata < 2:6315367/76‑1 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAata < 1:3871672/76‑1 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAatat > 2:5857908/1‑76 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAatat < 2:3141737/76‑1 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAatat < 2:3140359/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata < 2:1766529/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata < 2:4289142/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata < 2:5196504/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata < 1:2413466/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata < 2:6959775/76‑1 (MQ=255) ttCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAg < 2:6713582/76‑1 (MQ=255) ttCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAg < 2:4760747/76‑1 (MQ=255) ttCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAg < 1:6752713/76‑1 (MQ=255) cAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGat < 2:4689652/76‑1 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt > 2:70095/1‑76 (MQ=255) gtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTc > 2:342739/1‑76 (MQ=255) gtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTc < 2:3347840/76‑1 (MQ=255) tCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCa < 2:4629100/76‑1 (MQ=255) ccAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa < 1:4608584/76‑1 (MQ=255) ccAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa > 2:3701100/1‑76 (MQ=255) ccAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa > 2:1655681/1‑76 (MQ=255) cAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaaa < 1:1343044/76‑1 (MQ=255) aaaCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAg > 1:5709909/1‑76 (MQ=255) aaCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGc > 2:4469743/1‑76 (MQ=255) aCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGcc < 2:5014229/76‑1 (MQ=255) ccATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt < 2:6162340/76‑1 (MQ=255) ccATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt < 2:624808/76‑1 (MQ=255) ccATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt < 2:2323712/76‑1 (MQ=255) cATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTg < 1:1029839/76‑1 (MQ=255) cATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTg < 1:2832480/76‑1 (MQ=255) aTGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGt > 2:877272/1‑76 (MQ=255) tGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTa < 2:4714521/76‑1 (MQ=255) tGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTa < 2:3898967/76‑1 (MQ=255) | CTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTA > REL606/3582393‑3582543 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |