| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3582468 = | 162 (0.750) | 3 (0.020) | 3/138 | 21.6 | 2.0% | coding (488/1224 nt) | yhiS | hypothetical protein |
| ? | REL606 | 3582955 = | 145 (0.730) | coding (975/1224 nt) | yhiS | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 155 total aligned reads displayed.
TAAATTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGA > REL606/3582880‑3583029 | tAAATTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACaa > 1:5133290/1‑76 (MQ=255) aaaTTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAAt < 1:4792177/76‑1 (MQ=255) aaaTTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAAt > 2:5231252/1‑76 (MQ=255) aaTTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATg > 2:4771329/1‑76 (MQ=255) tttttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGtt > 2:6632772/1‑76 (MQ=255) tttttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGtt < 2:3800738/76‑1 (MQ=255) ttttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTta > 1:5656946/1‑76 (MQ=255) ttttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTta < 2:5926490/76‑1 (MQ=255) ttttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTta > 2:5285716/1‑76 (MQ=255) tttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtat > 2:2435769/1‑76 (MQ=255) tttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtat > 1:1988115/1‑76 (MQ=255) tttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtat < 2:5262661/76‑1 (MQ=255) ttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtata < 2:3315663/76‑1 (MQ=255) ttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtata > 1:6069919/1‑76 (MQ=255) ttAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTtata > 2:4911875/1‑76 (MQ=255) agagGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAg > 2:4466927/1‑76 (MQ=255) agagGCCAGGATAACCAATCTTTAATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAg > 2:4917940/1‑76 (MQ=255) gagGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGc > 1:450432/1‑76 (MQ=255) agGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCa < 2:5574511/76‑1 (MQ=255) ggCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCaa < 2:1748596/76‑1 (MQ=255) ggCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCaa > 1:4657202/1‑76 (MQ=255) ggCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCaa < 1:2831114/76‑1 (MQ=255) ggCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCaa < 2:6603492/76‑1 (MQ=255) gCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAg > 2:160379/1‑76 (MQ=255) gCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAg > 2:5608075/1‑76 (MQ=255) gCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAg < 1:4893298/76‑1 (MQ=255) gCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAg < 2:6574834/76‑1 (MQ=255) ccAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGt > 2:4011235/1‑76 (MQ=255) ggATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTaa < 2:2514155/76‑1 (MQ=255) ggATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTaa < 2:773351/76‑1 (MQ=255) ggATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTaa < 2:460206/76‑1 (MQ=255) gATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTaaa < 2:3355213/76‑1 (MQ=255) gATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTaaa < 1:6277857/76‑1 (MQ=255) gATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAAAATTCCAAAAACAATGTTATAAGCAAGTTaaa < 1:1323711/76‑1 (MQ=255) aTAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAg < 2:3943652/76‑1 (MQ=255) aTAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAg < 1:3949085/76‑1 (MQ=255) tAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCCCCCACAATGTTATAAGCAAGTTAAAGc > 2:4644315/1‑76 (MQ=255) ccAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCtt < 1:4129245/76‑1 (MQ=255) ccAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCtt < 2:6803286/76‑1 (MQ=255) aaTCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTa < 1:511367/76‑1 (MQ=255) aaTCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTa < 2:3808787/76‑1 (MQ=255) tCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACg < 2:4871945/76‑1 (MQ=255) ttCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGaca > 2:6905584/1‑76 (MQ=255) ttCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGaca > 2:2082966/1‑76 (MQ=255) tCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGacac > 1:6658679/1‑76 (MQ=255) tCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGacac > 1:3605388/1‑76 (MQ=255) cATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACAct > 1:3540495/1‑76 (MQ=255) tACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACActct > 2:1979169/1‑76 (MQ=255) cAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTcc < 2:2973633/76‑1 (MQ=255) cAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTcc > 2:1157516/1‑76 (MQ=255) aaTGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTccc > 2:869550/1‑76 (MQ=255) aaTGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTccc < 2:4035571/76‑1 (MQ=255) aaTGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTccc > 1:3336074/1‑76 (MQ=255) aTGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCg < 1:3129809/76‑1 (MQ=255) tGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGa < 2:532955/76‑1 (MQ=255) gACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGAt < 2:2577434/76‑1 (MQ=255) gACATATTAAAATATCAGCAAGAATACCAAAAACAATGTTATAAGCAAGTTAATGCCTTTATGACACTCTCCCGAt > 2:72493/1‑76 (MQ=255) aCATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATa < 1:2689196/76‑1 (MQ=255) aCATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATa < 1:6546162/76‑1 (MQ=255) cATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATAc > 2:3133396/1‑76 (MQ=255) atTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAAt > 1:2413933/1‑76 (MQ=255) atTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAAt < 2:3137327/76‑1 (MQ=255) atTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAAt > 2:6700773/1‑76 (MQ=255) atTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAAt > 1:1018867/1‑76 (MQ=255) ttAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATa < 1:1682790/76‑1 (MQ=255) taaaTATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATaac > 2:5557119/2‑75 (MQ=255) aaaaTATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATaaa > 2:1107952/1‑76 (MQ=255) aaaaTATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATaaa < 2:6734544/76‑1 (MQ=255) aaaTATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATaaaa < 2:265363/76‑1 (MQ=255) aaTATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAAt > 1:5448974/1‑76 (MQ=255) atatCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAAtt > 1:4211723/1‑76 (MQ=255) tatCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTc < 1:1414410/76‑1 (MQ=255) tatCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTc < 2:6507089/76‑1 (MQ=255) tatCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTc > 2:1126179/1‑76 (MQ=255) tatCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTAAAAGCCTTTACGACA‑‑CTCCCGATACAATAAAATTCaa < 2:4880200/76‑1 (MQ=255) cAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCaaa > 1:6712693/1‑76 (MQ=255) aGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAAc > 1:6490089/1‑76 (MQ=255) aGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAAc > 1:4192618/1‑76 (MQ=255) cAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACAt < 1:5306849/76‑1 (MQ=255) cAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACAt < 2:3473341/76‑1 (MQ=255) aGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATgg < 1:2272591/76‑1 (MQ=255) aaTTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGc > 1:983379/1‑76 (MQ=255) aaTTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGc < 2:2717571/76‑1 (MQ=255) aTTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCa < 2:4355187/76‑1 (MQ=255) aTTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCa < 2:3679123/76‑1 (MQ=255) ttCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAg < 2:2830065/76‑1 (MQ=255) ttCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAg < 1:4329649/76‑1 (MQ=255) tCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGa < 1:5291271/76‑1 (MQ=255) ccAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGaa > 2:571562/1‑76 (MQ=255) ccAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGaa > 1:5991565/1‑76 (MQ=255) ccAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGaa < 2:3565966/76‑1 (MQ=255) cAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGaaa > 1:1468895/1‑76 (MQ=255) aaaaaCAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAAt > 2:5221897/1‑76 (MQ=255) aaaCAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGt > 1:3263574/1‑76 (MQ=255) aCAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCt > 2:3553663/1‑76 (MQ=255) cAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTg < 2:6218411/76‑1 (MQ=255) cAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTg > 2:6672969/1‑76 (MQ=255) cAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTg > 1:6270064/1‑76 (MQ=255) aaTGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGa > 1:5455030/1‑76 (MQ=255) aaTGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGa < 1:6930666/76‑1 (MQ=255) | TAAATTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAAACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGA > REL606/3582880‑3583029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |